IP Library Granted Patent US 9,346,840
Granted Patent B2
US 9,346,840 · App. 14/475,762 · Granted May 24, 2016

Cyclopropylamines as LSD1 inhibitors

Inventors: Neil W. Johnson (Collegeville, PA); Jiri Kasparec (Collegeville, PA); Meagan B. Rouse (Collegeville, PA); Xinrong Tian (Collegeville, PA); William Henry Miller (Collegeville, PA); Dominic Suarez (Collegeville, PA)
Assignee: GlaxoSmithKline Intellectual Property (No. 2) Limited
C07F9/591C07C211/35C07C211/36C07C271/24C07D207/09C07D211/26C07D211/62C07D211/96C07D223/04C07D265/30C07D401/04C07D401/06C07D401/10C07D401/12C07D413/06C07F5/02C07F5/025C07C2101/02C07C2101/14
View Patent ↗
Loading inventors, assignments & file history…
Monitor This Case
Get email alerts when status or documents change.
Order Certified Copies
Most orders are placed with the USPTO same day — all within 24 business hours.
Order via The Patent Place →
Pre-filled with this patent's details
Quick Facts
Patent No.
US 9,346,840
App. No.
14/475,762
Granted
May 24, 2016
Kind
B2
Abstract

This invention relates to the use of cyclopropylamine derivatives for the modulation, notably the inhibition of the activity of Lysine-specific demethylase 1 (LSD1). Suitably, the present invention relates to the use of cyclopropylamines in the treatment of cancer.

Claims (126)

1. A compound of Formula (IV) or Formula (V):

wherein:

R 1 is selected from the group consisting of C 1 -C 6 alkyl, —NHSO 2 Me, —NHSO 2 Ph, arylalkoxy, C 3 -C 7 cycloalkyl, —NHC(O)R a , 1-methyl-1H-pyrazol-4-yl, hydroxyl, C 1 -C 4 alkoxy, halogen, amino, substituted amino, and —C(O)OR a ;

R 3 is selected from the group consisting of aryl, heteroaryl —SO 2 R a , —NHC(O)R a , —CH 2 C(O)OR a , —C(O)OR a , —C(O)R a , —C(O)NR a R b , amino, substituted amino, arylalkyl, and heteroarylalkyl;

each R a is independently hydrogen, phenyl, phenylmethyl, 3,5-dimethylisoxazol-4-yl, 1,2-dimethyl-1H-imidazol-4-yl, C 3 -C 7 cycloalkyl, or C 1 -C 6 alkyl;

R b is hydrogen or C 1 -C 3 alkyl; or

R a and R b together form a 5- or 6-membered heterocycloalkyl ring;

R 4 is H;

W is —(CH 2 ) 1-4 or —CH(R c )(CH 2 ) 0-3 , in which R c is —CN or C 1 -C 4 alkyl;

X is N;

Z is (CH 2 ) q , wherein q is 0-2, and wherein when q is 0, Z represents a bond; and

m is 0-3;

or a pharmaceutically acceptable salt thereof.

2. The compound or pharmaceutically acceptable salt thereof according to claim 1 , wherein R 1 is F, Cl, C 1 -C 4 alkoxy, or C 1 -C 4 alkyl.

3. The compound or pharmaceutically acceptable salt thereof according to claim 1 , wherein m is 0.

4. The compound or pharmaceutically acceptable salt thereof according to claim 1 , wherein R 3 is selected from the group consisting of aryl, arylalkyl, heteoaryl, and heteroarylalkyl, wherein any said aryl or heteroaryl are each optionally substituted with one, two, or three groups selected from the group consisting of —COOH, C 1 -C 4 alkoxy, —C(O)OC 1 -C 4 alkyl, C 1 -C 4 alkyl, halogen, —CN, tetrazolyl, —NHSO 2 Me, —SO 2 Me, —C(O)NHSO 2 Me, and —OCH 2 COOH.

5. The compound or pharmaceutically acceptable salt thereof according to claim 1 , wherein R 3 is selected from the group consisting of —SO 2 R a , —C(O)OR a , —C(O)R a , —C(O)NR a R b , arylalkyl, and heteroarylalkyl, wherein R a is phenyl, phenylmethyl, C 3 -C 7 cycloalkyl, or C 1 -C 6 alkyl; and R b is hydrogen or C 1 -C 3 alkyl.

6. The compound or pharmaceutically acceptable salt thereof according to claim 1 , which is represented by Formula (VI):

wherein:

R 1 is selected from the group consisting of C 1 -C 6 alkyl, —NHSO 2 Me, —NHSO 2 Ph, arylalkoxy, C 3 -C 7 cycloalkyl, —NHC(O)R a , 1-methyl-1H-pyrazol-4-yl, hydroxyl, C 1 -C 4 alkoxy, halogen, amino, substituted amino, and —C(O)OR a ;

each R a is independently hydrogen, phenyl, phenylmethyl, 3,5-dimethylisoxazol-4-yl, 1,2-dimethyl-1H-imidazol-4-yl, C 3 -C 7 cycloalkyl, or C 1 -C 6 alkyl;

W is —(CH 2 ) 1-4 or —CH(R c )(CH 2 ) 0-3 , in which R c is —CN or C 1 -C 4 alkyl;

s is 1 or 2;

m is 0 or 1; and

each R 5 is independently selected from the group consisting of: —COOH, C 1 -C 4 alkoxy, —C(O)OC 1 -C 4 alkyl, C 1 -C 4 alkyl, halogen, CN, tetrazolyl, —NHSO 2 Me, —SO 2 Me, —C(O)NHSO 2 Me, and —OCH 2 COOH.

7. The compound or pharmaceutically acceptable salt thereof according to claim 1 , which is represented by Formula (VII):

wherein:

R 1 is selected from the group consisting of C 1 -C 6 alkyl, —NHSO 2 Me, —NHSO 2 Ph, arylalkoxy, C 3 -C 7 cycloalkyl, —NHC(O)R a , 1-methyl-1H-pyrazol-4-yl, hydroxyl, C 1 -C 4 alkoxy, halogen, amino, substituted amino, and —C(O)OR a ;

each R a is independently hydrogen, phenyl, phenylmethyl, 3,5-dimethylisoxazol-4-yl, 1,2-dimethyl-1H-imidazol-4-yl, C 3 -C 7 cycloalkyl, or C 1 -C 6 alkyl;

W is —(CH 2 ) 1-4 or —CH(R c )(CH 2 ) 0-3 , in which R c is —CN or C 1 -C 4 alkyl;

s is 1 or 2;

m is 0 or 1; and

each R 5 is independently selected from the group consisting of: —COOH, C 1 -C 4 alkoxy, —C(O)OC 1 -C 4 alkyl, C 1 -C 4 alkyl, halogen, CN, tetrazolyl, —NHSO 2 Me, —SO 2 Me, —C(O)NHSO 2 Me, and —OCH 2 COOH.

8. The compound or pharmaceutically acceptable salt thereof according to claim 6 , wherein s is 1 and R 5 is —COOH.

9. The compound or pharmaceutically acceptable salt thereof according to claim 7 , wherein s is 1 and R 5 is —COOH.

10. A compound which is:

1,1-Dimethylethyl 4-({[trans-2-phenylcyclopropyl]amino}methyl)-1-piperidinecarboxylate;

1,1-Dimethylethyl 4-({[(1R,2S)-2-phenylcyclopropyl]amino}methyl)-1-piperidinecarboxylate;

1,1-Dimethylethyl 4-({[(1S,2R)-2-phenylcyclopropyl]amino}methyl)-1-piperidinecarboxylate;

[trans-2-Phenylcyclopropyl]{[1-(phenylmethyl)-4-piperidinyl]methyl}amine;

N-Phenyl-4-(((trans-2-phenylcyclopropyl)amino)methyl)piperidine-1-carboxamide;

Phenyl(4-(((trans-2-phenylcyclopropyl)amino)methyl)piperidin-1-yl)methanone;

1-(4-(((trans-2-Phenylcyclopropyl)amino)methyl)piperidin-1-yl)ethanone;

Benzyl 4-(((trans-2-phenylcyclopropyl)amino)methyl)piperidine-1-carboxylate;

1,1-Dimethylethyl 4-({[trans-2-phenylcyclopropyl]amino}methyl)hexahydro-1H-azepine-1-carboxylate

2-(4-(((trans-2-phenylcyclopropyl)amino)methyl)piperidin-1-yl)acetic acid;

4-{[(3R)-3-({[(1R,2S)-2-Phenylcyclopropyl]amino}methyl)-1-pyrrolidinyl]methyl}benzoic acid;

4-{[(3S)-3-({[(1R,2S)-2-Phenylcyclopropyl]amino}methyl)-1-pyrrolidinyl]methyl}benzoic acid;

4-{3-[4-({[(1R,2S)-2-Phenylcyclopropyl]amino}methyl)-1-piperidinyl]propyl}benzoic acid;

trans-2-Phenyl-N-((1-(pyridin-4-ylmethyl)piperidin-4-yl)methyl)cyclopropanamine;

trans-N-((1-(2-Fluorobenzyl)piperidin-4-yl)methyl)-2-phenylcyclopropanamine;

trans-N-((1-(3-Fluorobenzyl)piperidin-4-yl)methyl)-2-phenylcyclopropanamine;

trans-N-((1-(4-Fluorobenzyl)piperidin-4-yl)methyl)-2-phenylcyclopropanamine;

trans-N-((1-(2,4-Difluorobenzyl)piperidin-4-yl)methyl)-2-phenylcyclopropanamine;

Ethyl 4-((4-(((trans-2-phenylcyclopropyl)amino)methyl)piperidin-1-yl)methyl)benzoate;

trans-N-((1-(4-(Methylsulfonyl)benzyl)piperidin-4-yl)methyl)-2-phenylcyclopropanamine;

2-((4-(((trans-2-Phenylcyclopropyl)amino)methyl)piperidin-1-yl)methyl)benzonitrile;

trans-2-Phenyl-N-((1-(2-(trifluoromethyl)benzyl)piperidin-4-yl)methyl)cyclopropanamine;

trans-N-((1-((5-Methylisoxazol-3-yl)methyl)piperidin-4-yl)methyl)-2-phenylcyclopropanamine;

trans-N-((1-((1H-Pyrazol-4-yl)methyl)piperidin-4-yl)methyl)-2-phenylcyclopropanamine;

N-(4-((4-(((trans-2-Phenylcyclopropyl)amino)methyl)piperidin-1-yl)methyl)phenyl)acetamide;

4-((4-(((trans-2-Phenylcyclopropyl)amino)methyl)piperidin-1-yl)methyl)benzo[c][1,2]oxaborol-1(3H)-ol;

5-((4-(((trans-2-Phenylcyclopropyl)amino)methyl)piperidin-1-yl)methyl)benzo[c][1,2]oxaborol-1(3H)-ol;

(4-((4-(((trans-2-phenylcyclopropyl)amino)methyl)piperidin-1-yl)methyl)phenyl)boronic acid;

2-((4-(((trans-2-Phenylcyclopropyl)amino)methyl)piperidin-1-yl)methyl)benzoic acid;

3-((4-(((trans-2-Phenylcyclopropyl)amino)methyl)piperidin-1-yl)methyl)benzoic acid;

4-((4-(((trans-2-(4-Bromophenyl)cyclopropyl)amino)methyl)piperidin-1-yl)methyl)benzoic acid;

4-((4-(((trans-2-(4-Chlorophenyl)cyclopropyl)amino)methyl)piperidin-1-yl)methyl)benzoic acid;

4-((4-(((trans-2-(3,4-Dichlorophenyl)cyclopropyl)amino)methyl)piperidin-1-yl)methyl)benzoic acid;

4-((4-(((trans-2-(4-(Trifluoromethyl)phenyl)cyclopropyl)amino)methyl)piperidin-1-yl)methyl)benzoic acid;

4-((4-(((trans-2-(3,4-Dimethoxyphenyl)cyclopropyl)amino)methyl)piperidin-1-yl)methyl)benzoic acid;

4-((4-(((trans-2-(4-Acetamidophenyl)cyclopropyl)amino)methyl)piperidin-1-yl)methyl)benzoic acid;

4-((4-(((trans-2-(4-Benzamidophenyl)cyclopropyl)amino)methyl)piperidin-1-yl)methyl)benzoic acid;

trans-2-Phenyl-N-((1-phenylpiperidin-4-yl)methyl)cyclopropanamine;

Ethyl 4-(((trans-2-phenylcyclopropyl)amino)methyl)piperidine-1-carboxylate;

trans-4-((4-(((trans-2-Phenylcyclopropyl)amino)methyl)piperidin-1-yl)methyl)cyclohexanecarboxylic acid;

(trans)-N-((1-(Methylsulfonyl)piperidin-4-yl)methyl)-2-phenylcyclopropanamine;

N-ethyl-4-((((trans)-2-phenylcyclopropyl)amino)methyl)piperidine-1-carboxamide;

N-cyclopropyl-4-((((trans)-2-phenylcyclopropyl)amino)methyl)piperidine-1-carboxamide;

N,N-dimethyl-4-((((trans)-2-phenylcyclopropyl)amino)methyl)piperidine-1-carboxamide,

(4-((((trans)-2-phenylcyclopropyl)amino)methyl)piperidin-1-yl)(pyrrolidin-1-yl)methanone;

trans-N-((1-((cyclopropylsulfonyl)piperidin-4-yl)methyl)-2-phenylcyclopropanamine;

trans-N-((1-((isopropylsulfonyl)piperidin-4-yl)methyl)-2-phenylcyclopropanamine;

trans-N-((1-(3,5-dimethylisoxazol-4-yl)sulfonyl)piperidin-4-yl)methyl)-2-phenylcyclopropanamine;

trans-N-((1-((1,2-dimethyl-1H-imidazol-4-yl)sulfonyl)piperidin-4-yl)methyl)-2-phenylcyclopropanamine;

(trans)-2-Phenyl-N-(2-(1-(pyridin-2-yl)piperidin-4-yl)ethyl)cyclopropanamine;

6-(4-(2-(((trans)-2-Phenylcyclopropyl)amino)ethyl) piperidin-1-yl) nicotinic acid;

trans-2-phenyl-N-(2-(1-(pyridin-4-yl)piperidin-4-yl)ethyl)cyclopropanamine;

trans-2-phenyl-N-(2-(1-(pyrimidin-4-yl)piperidin-4-yl)ethyl)cyclopropanamine;

trans-2-phenyl-N-(2-(1-phenylpiperidin-4-yl)ethyl)cyclopropanamine;

trans-2-phenyl-N-(2-(1-(pyridin-3-yl)piperidin-4-yl)ethyl)cyclopropanamine;

trans-2-phenyl-N-(2-(1-(pyrimidin-2-yl)piperidin-4-yl)ethyl)cyclopropanamine;

3-Cyano-4-((4-((((trans)-2-phenylcyclopropyl)amino)methyl)piperidin-1-yl)methyl)benzoic acid;

2-fluoro-4-((4-((((trans)-2-phenylcyclopropyl)amino)methyl)piperidin-1-yl)methyl)benzoic acid;

3-fluoro-4-((4-((((trans)-2-phenylcyclopropyl)amino)methyl)piperidin-1-yl)methyl)benzoic acid;

3-chloro-4-((4-((((trans)-2-phenylcyclopropyl)amino)methyl)piperidin-1-yl)methyl)benzoic acid;

3-methoxy-4-((4-((((trans)-2-phenylcyclopropyl)amino)methyl)piperidin-1-yl)methyl)benzoic acid;

2-chloro-4-((4-((((trans)-2-phenylcyclopropyl)amino)methyl)piperidin-1-yl)methyl)benzoic acid;

4-(3-(4-(Cyano(((1R,2S)-2-phenylcyclopropyl)amino)methyl)piperidin-1-yl)propyl)benzoic acid;

4-{3-[4-({[(trans))-2-phenylcyclopropyl]amino}methyl)-1-piperidinyl]propyl}benzoic acid;

4-(4-(4-((((1R,2S)-2-Phenylcyclopropyl)amino)methyl)piperidin-1-yl)butyl)benzoic acid;

4-(4-(4-(Cyano(((1R,2S)-2-phenylcyclopropyl)amino)methyl)piperidin-1-yl)butyl)benzoic acid;

4-(2-(4-((((trans)-2-Phenylcyclopropyl)amino)methyl)piperidin-1-yl)ethyl)benzoic acid;

4-(2-(4-((((1R,2S)-2-phenylcyclopropyl)amino)methyl)piperidin-1-yl)ethyl)benzoic acid;

6-((4-((((trans)-2-Phenylcyclopropyl)amino)methyl)piperidin-1-yl)methyl)-2-naphthoic acid;

6-((4-((((1R,2S)-2-Phenylcyclopropyl)amino)methyl)piperidin-1-yl)methyl)-2-naphthoic acid;

(trans)-N-((1-(4-(1H-Tetrazol-5-yl)benzyl)piperidin-4-yl)methyl)-2-phenylcyclopropanamine;

2-(4-((4-((((trans)-2-Phenylcyclopropyl)amino)methyl)piperidin-1-yl)methyl)benzamido)acetic acid;

N-(4-((4-((((trans)-2-Phenylcyclopropyl)amino)methyl)piperidin-1-yl)methyl)phenyl)methanesulfonamide;

(trans)-N-((1-(3-(1H-Tetrazol-5-yl)propyl)piperidin-4-yl)methyl)-2-phenylcyclopropanamine;

4-((4-(2-(((trans)-2-Phenylcyclopropyl)amino)ethyl)piperidin-1-yl)methyl)benzoic acid;

6-((4-((((trans)-2-Phenylcyclopropyl)amino)methyl)piperidin-1-yl)methyl)nicotinic acid;

2-(4-((4-((((trans)-2-Phenylcyclopropyl)amino)methyl)piperidin-1-yl)methyl)phenyl)acetic acid;

2-((4-((((trans)-2-Phenylcyclopropyl)amino)methyl)piperidin-1-yl)methyl)oxazole-4-carboxylic acid;

2-(4-((4-((((trans)-2-phenylcyclopropyl)amino)methyl)piperidin-1-yl)methyl)phenoxy)acetic acid;

N-(Methylsulfonyl)-4-((4-((((trans)-2-phenylcyclopropyl)amino)methyl)piperidin-1-yl)methyl)benzamide;

4-((4-((((trans)-2-(4-Iodophenyl)cyclopropyl)amino)methyl)piperidin-1-yl)methyl)benzoic acid;

4-((trans)-2-(((1-Benzylpiperidin-4-yl)methyl)amino)cyclopropyl)benzoic acid;

4-((4-((((trans)-2-(4-(1-Methyl-1H-pyrazol-4-yl)phenyl)cyclopropyl)amino)methyl)piperidin-1-yl)methyl)benzoic acid;

4-((4-((((trans)-2-(4-Cyclopropylphenyl)cyclopropyl)amino)methyl)piperidin-1-yl)methyl)benzoic acid;

2-Chloro-4-((4-((((1R,2S)-2-phenylcyclopropyl)amino)methyl)piperidin-1-yl)methyl)benzoic acid;

3-(3-(4-((((trans)-2-Phenylcyclopropyl)amino)methyl)piperidin-1-yl)propyl)benzoic acid; or

2-(4-((4-((((1R,2S)-2-Phenylcyclopropyl)amino)methyl)piperidin-1-yl)methyl)phenyl)acetic acid;

or a pharmaceutically acceptable salt thereof.

11. A pharmaceutical composition comprising the compound or pharmaceutically acceptable salt thereof according to claim 1 and a pharmaceutically acceptable excipient.

12. A pharmaceutical composition comprising the compound or pharmaceutically acceptable salt thereof according to claim 10 and a pharmaceutically acceptable excipient.

Assignments (2)
CHANGE OF ADDRESS Recorded Apr 16, 2025
From: GLAXOSMITHKLINE INTELLECTUAL PROPERTY (NO.2) LIMITED
To: GLAXOSMITHKLINE INTELLECTUAL PROPERTY (NO.2) LIMITED
Reel/Frame 070854/0469 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Sep 19, 2014
From: JOHNSON, NEIL W.; KASPAREC, JIRI; MILLER, WILLIAM HENRY; ROUSE, MEAGAN B.; SUAREZ, DOMINIC; TIAN, XINRONG
To: GLAXOSMITHKLINE INTELLECTUAL PROPERTY (NO.2) LIMITED
Reel/Frame 033774/0657 →
Continuity (5)
Continuation 14007035
Provisional Application 61467524 · Mar 25, 2011
Provisional Application 61514410 · Aug 2, 2011
Provisional Application 61594012 · Feb 2, 2012
Related Publication 20140371176A1 · Dec 18, 2014