IP Library Granted Patent US 9,757,434
Granted Patent B2
US 9,757,434 · App. 14/495,478 · Granted Sep 12, 2017

FXa variant compositions

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Quick Facts
Patent No.
US 9,757,434
App. No.
14/495,478
Granted
Sep 12, 2017
Kind
B2
Abstract

Compositions are provided comprising recombinant variants of the human clotting Factor Xa. Such compositions include a wide variety of isoforms and post-translational modifications of FXa and are useful for treating subjects in need of hemostasis.

Claims (114)

1. A composition with pro-coagulant activity comprising:

a first recombinant FXa variant protein wherein the light chain and heavy chain protein sequences respectively consist of amino acids 1 to 140 and 146 to 386 of the amino acid sequence of SEQ ID NO:1;

and a second recombinant FXa variant protein selected from the group consisting of:

(i) a recombinant FXa variant protein wherein the light chain and heavy chain protein sequences respectively consist of amino acids 1 to 139 and 146 to 386 of the amino acid sequence of SEQ ID NO:1,

(ii) a recombinant FXa variant protein wherein the light chain and heavy chain protein sequences respectively consist of amino acids 1 to 141 and 146 to 386 of the amino acid sequence of SEQ ID NO:1,

(iii) a recombinant FXa variant protein wherein the light chain and heavy chain protein sequences respectively consist of amino acids 1 to 142 and 146 to 386 of the amino acid sequence of SEQ ID NO:1,

(iv) a recombinant FXa variant protein wherein the light chain and heavy chain protein sequences respectively consist of amino acids 1 to 143 and 146 to 386 of the amino acid sequence of SEQ ID NO:1,

(v) a recombinant FXa variant protein wherein the light chain and heavy chain protein sequences respectively consist of amino acids 1 to 140 and 146 to 384 of the amino acid sequence of SEQ ID NO:1,

(vi) a recombinant FXa variant protein wherein the light chain and heavy chain protein sequences respectively consist of amino acids 1 to 141 and 146 to 384 of the amino acid sequence of SEQ ID NO:1,

(vii) a recombinant FXa variant protein wherein the light chain and heavy chain protein sequences respectively consist of amino acids 1 to 142 and 146 to 384 of the amino acid sequence of SEQ ID NO:1; and

(viii) a recombinant FXa variant protein wherein the light chain and heavy chain protein sequences respectively consist of amino acids 1 to 143 and 146 to 384 of the amino acid sequence of SEQ ID NO:1.

2. The composition of claim 1 , wherein a light chain of at least one of said recombinant FXa variant proteins comprises β-hydroxy Asp 63 and an O-linked hexose.

3. The composition of claim 1 , wherein a light chain of at least one of said recombinant FXa variant proteins comprises 10 Gla residues.

4. The composition of claim 1 , wherein a light chain of at least one of said recombinant FXa variant proteins comprises 11 Gla residues.

5. The composition of claim 1 , wherein a light chain of at least one of said recombinant FXa variant proteins comprises β-hydroxy Asp 63 , an O-linked hexose, and 10 or 11 Gla residues.

6. The composition of claim 1 , wherein said composition comprises:

(i) a first recombinant FXa variant protein wherein the light chain and heavy chain protein sequences respectively consist of amino acids 1 to 140 and 146 to 386 of the amino acid sequence of SEQ ID NO:1,

(ii) a second recombinant FXa variant protein wherein the light chain and heavy chain protein sequences respectively consist of amino acids 1 to 139 and 146 to 386 of the amino acid sequence of SEQ ID NO:1,

(iii) a third recombinant FXa variant protein wherein the light chain and heavy chain protein sequences respectively consist of amino acids 1 to 141 and 146 to 386 of the amino acid sequence of SEQ ID NO:1; and

(iv) a fourth recombinant FXa variant protein wherein the light chain and heavy chain protein sequences respectively consist of amino acids 1 to 142 and 146 to 386 of the amino acid sequence of SEQ ID NO:1.

7. The composition of claim 6 , wherein a light chain of each of said first, second, third, and fourth recombinant FXa variant proteins comprises β-hydroxy Asp 63 , an O-linked hexose, and at least 10 Gla residues.

8. The composition of claim 7 , wherein a light chain of each of said first, third, and fourth recombinant FXa variant proteins comprises β-hydroxy Asp 63 , an O-linked hexose, and 11 Gla residues.

9. A composition with pro-coagulant activity comprising:

a first recombinant FXa variant protein wherein the light chain and heavy chain protein sequence respectively consist of amino acids 1 to 140 and 146 to 398 of the amino acid sequence of SEQ ID NO:1;

and a second recombinant FXa variant protein selected from the group consisting of:

(i) a recombinant FXa variant protein wherein the light chain and heavy chain protein sequence respectively consist of amino acids 1 to 139 and 146 to 398 of the amino acid sequence of SEQ ID NO:1,

(ii) a recombinant FXa variant protein wherein the light chain and heavy chain protein sequence respectively consist of amino acids 1 to 141 and 146 to 398 of the amino acid sequence of SEQ ID NO:1,

(iii) a recombinant FXa variant protein wherein the light chain and heavy chain protein sequence respectively consist of amino acids 1 to 141 and 146 to 399 of the amino acid sequence of SEQ ID NO:1,

(iv) a recombinant FXa variant protein wherein the light chain and heavy chain protein sequence respectively consist of amino acids 1 to 142 and 146 to 398 of the amino acid sequence of SEQ ID NO:1,

(v) a recombinant FXa variant protein wherein the light chain and heavy chain protein sequences respectively consist of amino acids 1 to 140 and 146 to 399 of the amino acid sequence of SEQ ID NO:1, and

(vi) a recombinant FXa variant protein wherein the light chain and heavy chain protein sequences respectively consist of amino acids 1 to 142 and 146 to 399 of the amino acid sequence of SEQ ID NO:1.

10. The composition of claim 9 , wherein a light chain of at least one of said recombinant FXa variant proteins comprises β-hydroxy Asp 63 and an O-linked hexose.

11. The composition of claim 9 , wherein a light chain of at least one of said recombinant FXa variant proteins comprises 10 Gla residues.

12. The composition of claim 9 , wherein a light chain of at least one of said recombinant FXa variant proteins comprises 11 Gla residues.

13. The composition of claim 9 , wherein a light chain of at least one of said recombinant FXa variant proteins comprises β-hydroxy Asp 63 , an O-linked hexose, and 10 or 11 Gla residues.

14. The composition of claim 9 , wherein a heavy chain of at least one of said recombinant FXa variant proteins comprises one core-1 O-linked glycan.

15. The composition of claim 14 , wherein the core-1 O-linked glycan is mono-sialylated.

16. The composition of claim 14 , wherein the core-1 O-linked glycan is di-sialylated.

17. The composition of claim 9 , wherein a heavy chain of at least one of said recombinant FXa variant proteins comprises two core-1 O-linked glycans.

18. The composition of claim 17 , wherein both core-1 O-linked glycans are mono-sialylated.

19. The composition of claim 17 , wherein both core-1 O-linked glycans are di-sialylated.

20. The composition of claim 17 , wherein one of said core-1 O-linked glycans is mono-sialylated and the second of said core-1 O-linked glycans is di-sialylated.

21. A composition with pro-coagulant activity comprising:

(i) a first recombinant FXa variant protein wherein the light chain and heavy chain protein sequences respectively consist of amino acids 1 to 140 and 146 to 398 of the amino acid sequence of SEQ ID NO: 1,

(ii) a second recombinant FXa variant protein wherein the light chain and heavy chain protein sequences respectively consist of amino acids 1 to 139 and 146 to 398 of the amino acid sequence of SEQ ID NO: 1,

(iii) a third recombinant FXa variant protein wherein the light chain and heavy chain protein sequences respectively consist of amino acids 1 to 141 and 146 to 398 of the amino acid sequence of SEQ ID NO: 1; and

(iv) a fourth recombinant FXa variant protein wherein the light chain and heavy chain protein sequences respectively consist of amino acids 1 to 141 and 146 to 399 of the amino acid sequence of SEQ ID NO: 1.

22. The composition of claim 21 , wherein a light chain of each of said first, second, third, and fourth recombinant FXa variant proteins comprises β-hydroxy Asp 63 , an O-linked hexose, and at least 10 Gla residues.

23. The composition of claim 22 , wherein a light chain of each of said first, second, third, and fourth recombinant FXa variant proteins comprises β-hydroxy Asp 63 , an O-linked hexose, and 11 Gla residues.

24. The composition of claim 21 , wherein a heavy chain of each of said first, second, third, and fourth recombinant FXa variant proteins comprises one core-1 O-linked glycan.

25. The composition of claim 24 , wherein the core-1 O-linked glycan is di-sialylated.

26. A composition with pro-coagulant activity comprising:

a first recombinant FXa variant protein wherein the light chain and heavy chain protein sequences respectively consist of amino acids 1 to 141 and 146 to 399 of the amino acid sequence of SEQ ID NO:1;

and a second recombinant FXa variant protein selected from the group consisting of:

(i) a recombinant FXa variant protein wherein the light chain and heavy chain protein sequences respectively consist of amino acids 1 to 140 and 146 o 399 of the amino acid sequence of SEQ ID NO:1; and

(ii) a recombinant FXa variant protein wherein the light chain and heavy chain protein sequences respectively consist of amino acids 1 to 141 and 146 to 398 of the amino acid sequence of SEQ ID NO:1.

27. The composition of claim 26 , wherein a light chain of each of said first and second recombinant FXa variant proteins comprises β-hydroxy Asp 63 , an O-linked hexose, and at least 10 Gla residues.

28. The composition of claim 27 , wherein a light chain of each of said first and second recombinant FXa variant proteins comprises β-hydroxy Asp 63 , an O-linked hexose, and 11 Gla residues.

29. The composition of claim 26 , wherein a heavy chain of each of said first and second recombinant FXa variant proteins comprises two core-1 O-linked glycans.

30. The composition of claim 29 , wherein both core-1 O-linked glycans are di-sialylated.

31. A composition with pro-coagulant activity comprising two or more recombinant FXa variant proteins selected from the group consisting of:

(a) a recombinant FXa variant protein wherein the light chain and heavy chain protein sequences respectively consist of amino acids 1 to 139 and 146 to 386 of the amino acid sequence of SEQ ID NO:1,

(b) a recombinant FXa variant protein wherein the light chain and heavy chain protein sequences respectively consist of amino acids 1 to 140 and 146 to 386 of the amino acid sequence of SEQ ID NO:1;

(c) a recombinant FXa variant protein wherein the light chain and heavy chain protein sequences respectively consist of amino acids 1 to 141 and 146 to 386 of the amino acid sequence of SEQ ID NO:1,

(d) a recombinant FXa variant protein wherein the light chain and heavy chain protein sequences respectively consist of amino acids 1 to 142 and 146 to 386 of the amino acid sequence of SEQ ID NO:1,

(e) a recombinant FXa variant protein wherein the light chain and heavy chain protein sequences respectively consist of amino acids 1 to 143 and 146 to 386 of the amino acid sequence of SEQ ID NO:1,

(f) a recombinant FXa variant protein wherein the light chain and heavy chain protein sequences respectively consist of amino acids 1 to 140 and 146 to 384 of the amino acid sequence of SEQ ID NO:1,

(g) a recombinant FXa variant protein wherein the light chain and heavy chain protein sequences respectively consist of amino acids 1 to 141 and 146 to 384 of the amino acid sequence of SEQ ID NO:1,

(h) a recombinant FXa variant protein wherein the light chain and heavy chain protein sequences respectively consist of amino acids 1 to 142 and 146 to 384 of the amino acid sequence of SEQ ID NO:1, and

(i) a recombinant FXa variant protein wherein the light chain and heavy chain protein sequences respectively consist of amino acids 1 to 143 and 146 to 384 of the amino acid sequence of SEQ ID NO:1.

32. The composition of claim 31 , wherein the light chains of said recombinant FXa variant proteins comprise β-hydroxy Asp 63 and an O-linked hexose.

33. The composition of claim 31 , wherein the light chains of said recombinant FXa variant proteins comprise β-hydroxy Asp 63 , an O-linked hexose, and 10 or 11 Gla residues.

34. The composition of claim 31 , comprising 3, 4, 5, 6, 7, 8, or all 9 recombinant FXa variant proteins selected from among (a)-(i).

35. A composition with pro-coagulant activity comprising two or more recombinant FXa variant proteins selected from the group consisting of:

(a) a recombinant FXa variant protein wherein the light chain and heavy chain protein sequence respectively consist of amino acids 1 to 139 and 146 to 398 of the amino acid sequence of SEQ ID NO:1,

(b) a recombinant FXa variant protein wherein the light chain and heavy chain protein sequence respectively consist of amino acids 1 to 140 and 146 to 398 of the amino acid sequence of SEQ ID NO:1;

(c) a recombinant FXa variant protein wherein the light chain and heavy chain protein sequence respectively consist of amino acids 1 to 141 and 146 to 398 of the amino acid sequence of SEQ ID NO:1,

(d) A recombinant FXa variant protein wherein the light chain and heavy chain protein sequence respectively consist of amino acids 1 to 142 and 146 to 398 of the amino acid sequence of SEQ ID NO:1,

(e) a recombinant FXa variant protein wherein the light chain and heavy chain protein sequences respectively consist of amino acids 1 to 140 and 146 to 399 of the amino acid sequence of SEQ ID NO:1,

(f) a recombinant FXa variant protein wherein the light chain and heavy chain protein sequences respectively consist of amino acids 1 to 141 and 146 to 399 of the amino acid sequence of SEQ ID NO:1, and

(g) a recombinant FXa variant protein wherein the light chain and heavy chain protein sequences respectively consist of amino acids 1 to 142 and 146 to 399 of the amino acid sequence of SEQ ID NO:1.

36. The composition of claim 35 , wherein the light chains of said recombinant FXa variant proteins comprise β-hydroxy Asp 63 and an O-linked hexose.

37. The composition of claim 35 , wherein the light chains of said recombinant FXa variant proteins comprise β-hydroxy Asp 63 , an O-linked hexose, and 10 or 11 Gla residues.

38. The composition of claim 35 , wherein the heavy chains of said recombinant FXa variant proteins comprise one or two core-1 O-linked glycans.

39. The composition of claim 38 , wherein at least one of said core-1 O-linked glycans is mono-sialylated or di-sialylated.

40. The composition of claim 35 , comprising 3, 4, 5, 6, or all 7 recombinant FXa variant proteins selected from among (a)-(g).

41. A composition with pro-coagulant activity comprising:

(a) a recombinant FXa variant protein wherein the light chain and heavy chain protein sequences respectively consist of amino acids 1 to 139 and 146 to 386 of the amino acid sequence of SEQ ID NO:1,

(b) a recombinant FXa variant protein wherein the light chain and heavy chain protein sequences respectively consist of amino acids 1 to 140 and 146 to 386 of the amino acid sequence of SEQ ID NO:1;

(c) a recombinant FXa variant protein wherein the light chain and heavy chain protein sequences respectively consist of amino acids 1 to 141 and 146 to 386 of the amino acid sequence of SEQ ID NO:1,

(d) a recombinant FXa variant protein wherein the light chain and heavy chain protein sequences respectively consist of amino acids 1 to 142 and 146 to 386 of the amino acid sequence of SEQ ID NO:1,

(e) a recombinant FXa variant protein wherein the light chain and heavy chain protein sequences respectively consist of amino acids 1 to 143 and 146 to 386 of the amino acid sequence of SEQ ID NO:1,

(f) a recombinant FXa variant protein wherein the light chain and heavy chain protein sequences respectively consist of amino acids 1 to 140 and 146 to 384 of the amino acid sequence of SEQ ID NO:1,

(g) a recombinant FXa variant protein wherein the light chain and heavy chain protein sequences respectively consist of amino acids 1 to 141 and 146 to 384 of the amino acid sequence of SEQ ID NO:1,

(h) a recombinant FXa variant protein wherein the light chain and heavy chain protein sequences respectively consist of amino acids 1 to 142 and 146 to 384 of the amino acid sequence of SEQ ID NO:1,

(i) a recombinant FXa variant protein wherein the light chain and heavy chain protein sequences respectively consist of amino acids 1 to 143 and 146 to 384 of the amino acid sequence of SEQ ID NO:1,

(j) a recombinant FXa variant protein wherein the light chain and heavy chain protein sequence respectively consist of amino acids 1 to 139 and 146 to 398 of the amino acid sequence of SEQ ID NO:1,

(k) a recombinant FXa variant protein wherein the light chain and heavy chain protein sequence respectively consist of amino acids 1 to 140 and 146 to 398 of the amino acid sequence of SEQ ID NO:1;

(l) a recombinant FXa variant protein wherein the light chain and heavy chain protein sequence respectively consist of amino acids 1 to 141 and 146 to 398 of the amino acid sequence of SEQ ID NO:1,

(m) a recombinant FXa variant protein wherein the light chain and heavy chain protein sequence respectively consist of amino acids 1 to 142 and 146 to 398 of the amino acid sequence of SEQ ID NO:1,

(n) a recombinant FXa variant protein wherein the light chain and heavy chain protein sequences respectively consist of amino acids 1 to 140 and 146 to 399 of the amino acid sequence of SEQ ID NO:1,

(o) a recombinant FXa variant protein wherein the light chain and heavy chain protein sequences respectively consist of amino acids 1 to 141 and 146 to 399 of the amino acid sequence of SEQ ID NO:1, and

(p) a recombinant FXa variant protein wherein the light chain and heavy chain protein sequences respectively consist of amino acids 1 to 142 and 146 to 399 of the amino acid sequence of SEQ ID NO:1.

42. The composition of claim 41 , wherein the light chains of said recombinant FXa variant proteins comprise β-hydroxy Asp 63 , an O-linked hexose, and 10 or 11 Gla residues.

43. The composition of claim 41 , wherein the heavy chains of said recombinant FXa variant proteins comprise one or two core-1 O-linked glycans.

44. The composition of claim 42 , wherein at least one of said core-1 O-linked glycans is mono-sialylated or di-sialylated.

45. The composition of claim 31 further comprising two or more recombinant FXa variant proteins selected from the group consisting of:

(a) a recombinant FXa variant protein wherein the light chain and heavy chain protein sequence respectively consist of amino acids 1 to 139 and 146 to 398 of the amino acid sequence of SEQ ID NO:1,

(b) a recombinant FXa variant protein wherein the light chain and heavy chain protein sequence respectively consist of amino acids 1 to 140 and 146 to 398 of the amino acid sequence of SEQ ID NO:1;

(c) a recombinant FXa variant protein wherein the light chain and heavy chain protein sequence respectively consist of amino acids 1 to 141 and 146 to 398 of the amino acid sequence of SEQ ID NO:1,

(d) A recombinant FXa variant protein wherein the light chain and heavy chain protein sequence respectively consist of amino acids 1 to 142 and 146 to 398 of the amino acid sequence of SEQ ID NO:1,

(e) a recombinant FXa variant protein wherein the light chain and heavy chain protein sequences respectively consist of amino acids 1 to 140 and 146 to 399 of the amino acid sequence of SEQ ID NO:1,

(f) a recombinant FXa variant protein wherein the light chain and heavy chain protein sequences respectively consist of amino acids 1 to 141 and 146 to 399 of the amino acid sequence of SEQ ID NO:1, and

(g) a recombinant FXa variant protein wherein the light chain and heavy chain protein sequences respectively consist of amino acids 1 to 142 and 146 to 399 of the amino acid sequence of SEQ ID NO:1.

Assignments (1)
ASSIGNEE ADDRESS CORRECTION Recorded Mar 20, 2023
From: PFIZER INC.
To: PFIZER INC.
Reel/Frame 063119/0087 →