IP Library Granted Patent US 9,388,173
Granted Patent B2
US 9,388,173 · App. 14/515,154 · Granted Jul 12, 2016

PRMT5 inhibitors and uses thereof

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Quick Facts
Patent No.
US 9,388,173
App. No.
14/515,154
Granted
Jul 12, 2016
Kind
B2
Abstract

Described herein are compounds of Formula (I), pharmaceutically acceptable salts thereof, and pharmaceutical compositions thereof. Compounds of the present invention are useful for inhibiting PRMT5 activity. Methods of using the compounds for treating PRMT5-mediated disorders are also described.

Claims (68)

1. A compound of formula I:

or a pharmaceutically acceptable salt thereof,

wherein:

represents a single or double bond;

R 1 is hydrogen, R z , or —C(O)R z , wherein R z is optionally substituted C 1-6 alkyl;

L is —O—, —N(R)—, —C(R 2 )(R 3 )—, —O—CR 2 R 3 , —N(R)—CR 2 R 3 —, —O—CR 2 R 3 —O—, —N(R)—CR 2 R 3 —O, —N(R)—CR 2 R 3 —N(R)—, —O—CR 2 R 3 —N(R)—, —CR 2 R 3 —O—, —CR 2 R 3 —N(R)—, —O—CR 2 R 3 —CR 9 R 10 —, —N(R)—CR 2 R 3 —CR 9 R 10 —, —CR 2 R 3 —CR 9 R 10 —O—, —CR 2 R 3 —CR 9 R 10 —N(R)—, or —CR 2 R 3 —CR 9 R 10 —;

each R is independently hydrogen or optionally substituted C 1-6 aliphatic;

R 2 and R 3 are independently selected from the group consisting of hydrogen, halo, —CN, —NO 2 , optionally substituted aliphatic, optionally substituted carbocyclyl; optionally substituted phenyl, optionally substituted heterocyclyl, optionally substituted heteroaryl, —OR A , —N(R B ) 2 , —SR A , —C(═O)R A , —C(O)OR A , —C(O)SR A , —C(O)N(R B ) 2 , —C(O)N(R B )N(R B ) 2 , —OC(O)R A , —OC(O)N(R B ) 2 , —NR B C(O)R A , —NR B C(O)N(R B ) 2 , —NR B C(O)N(R B )N(R B ) 2 , —NR B C(O)OR A , —SC(O)R A , —C(═NR B )R A , —C(═NNR B )R A , —C(═NOR A )R A , —C(═NR B )N(R B ) 2 , —NR B C(═NR B )R B , —C(═S)R A , —C(═S)N(R B ) 2 , —NR B C(═S)R A , —S(O)R A , —OS(O) 2 R A , —SO 2 R A , —NR B SO 2 R A , and —SO 2 N(R B ) 2 ; or R 2 and R 3 are taken together with their intervening atoms to form an optionally substituted carbocyclic or heterocyclic ring;

each R A is independently selected from the group consisting of hydrogen, optionally substituted aliphatic, optionally substituted carbocyclyl, optionally substituted heterocyclyl, optionally substituted aryl, and optionally substituted heteroaryl;

each R B is independently selected from the group consisting of hydrogen, optionally substituted aliphatic, optionally substituted carbocyclyl, optionally substituted heterocyclyl, optionally substituted aryl, and optionally substituted heteroaryl, or two R B groups are taken together with their intervening atoms to form an optionally substituted heterocyclic ring;

Ring A is phenyl;

R 4 is -L 1 -Cy;

L 1 is a bond;

Cy is an optionally substituted, monocyclic, aromatic ring selected from the group consisting of optionally substituted phenyl and optionally substituted 6-membered heteroaryl having 1-3 heteroatoms independently selected from nitrogen, oxygen, and sulfur;

R 5 , R 6 , R 7 , and R 8 are independently hydrogen, halo, or optionally substituted aliphatic;

R 9 and R 10 are independently selected from the group consisting of hydrogen, halo, —CN, —NO 2 , optionally substituted aliphatic, optionally substituted carbocyclyl; optionally substituted phenyl, optionally substituted heterocyclyl, optionally substituted heteroaryl, —OR A , —N(R B ) 2 , —SR A , —C(═O)R A , —C(O)OR A , —C(O)SR A , —C(O)N(R B ) 2 , —C(O)N(R B )N(R B ) 2 , —OC(O)R A , —OC(O)N(R B ) 2 , —NR B C(O)R A , —NR B C(O)N(R B ) 2 , —NR B C(O)N(R B )N(R B ) 2 , —NR B C(O)OR A , —SC(O)R A , —C(═NR B )R A , —C(═NNR B )R A , —C(═NOR A )R A , —C(═NR B )N(R B ) 2 , —NR B C(═NR B )R B , —C(═S)R A , —C(═S)N(R B ) 2 , —NR B C(═S)R A , —S(O)R A , —OS(O) 2 R A , —SO 2 R A , —NR B SO 2 R A , and —SO 2 N(R B ) 2 ; or R 9 and R 10 are taken together with their intervening atoms to form an optionally substituted carbocyclic or heterocyclic ring;

each R y is independently selected from the group consisting of halo, —CN, —NO 2 , optionally substituted aliphatic, optionally substituted carbocyclyl; optionally substituted aryl, optionally substituted heterocyclyl, optionally substituted heteroaryl, —OR A , —N(R B ) 2 , —SR A , —C(═O)R A , —C(O)OR A , —C(O)SR A , —C(O)N(R B ) 2 , —C(O)N(R B )N(R B ) 2 , —OC(O)R A , —OC(O)N(R B ) 2 , —NR B C(O)R A , —NR B C(O)N(R B ) 2 , —NR B C(O)N(R B )N(R B ) 2 , —NR B C(O)OR A , —SC(O)R A , —C(═NR B )R A , —C(═NNR B )R A , —C(═NOR A )R A , —C(═NR B )N(R B ) 2 , —NR B C(═NR B )R B , —C(═S)R A , —C(═S)N(R B ) 2 , —NR B C(═S)R A , —S(O)R A , —OS(O) 2 R A , —SO 2 R A , —NR B SO 2 R A , and —SO 2 N(R B ) 2 ;

each R x is independently selected from the group consisting of halo, —CN, optionally substituted aliphatic, —OR′, and —N(R″) 2 ;

R′ is hydrogen or optionally substituted aliphatic;

each R″ is independently hydrogen or optionally substituted aliphatic, or two R″ are taken together with their intervening atoms to form a heterocyclic ring;

n is 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, or 10, as valency permits;

m is 0, 1, 2, 3, or 4, as valency permits; and

p is 1;

wherein each instance of aliphatic is independently an alkyl, alkenyl, alkynyl, cycloalkyl, or cycloalkenyl group.

2. The compound of claim 1 , wherein L is —O—.

3. The compound of claim 1 , wherein R 1 is hydrogen.

4. The compound of claim 1 , wherein n is 0, 1, or 2.

5. The compound of claim 1 , wherein L is —N(R)— or —C(R 2 )(R 3 )—.

6. The compound of claim 1 , wherein the compound is of formula V:

or a pharmaceutically acceptable salt thereof, wherein X 1 , X 2 , X 3 , and X 4 are independently selected from the group consisting of CH and CR y .

7. The compound of claim 1 , wherein Cy is optionally substituted phenyl.

8. The compound of claim 1 , wherein Cy is optionally substituted 6-membered heteroaryl having 1-3 heteroatoms independently selected from nitrogen, oxygen, and sulfur.

9. A pharmaceutical composition comprising a compound of claim 1 or a pharmaceutically acceptable salt thereof, and a pharmaceutically acceptable excipient.

10. The compound of claim 1 selected from the group consisting of:

and pharmaceutically acceptable salts thereof.

11. A pharmaceutical composition comprising a compound of claim 10 or a pharmaceutically acceptable salt thereof, and a pharmaceutically acceptable excipient.

12. The compound of claim 1 , wherein the compound is of formula (I′):

or a pharmaceutically acceptable salt thereof,

wherein:

R 1 is hydrogen or C 1-4 alkyl;

L is —O—, —N(R)—, —C(R 2 )(R 3 )—, —CR 2 R 3 —O—, or —CR 2 R 3 —N(R)—;

each R is independently hydrogen or C 1-4 alkyl;

R 2 and R 3 are independently selected from the group consisting of hydrogen, halo, and C 1-4 alkyl;

Ring A is phenyl;

R 4 is -L 1 -Cy;

L 1 is a bond;

Cy is an optionally substituted, monocyclic, aromatic ring selected from the group consisting of optionally substituted phenyl and optionally substituted 6-membered heteroaryl having 1-3 heteroatoms independently selected from nitrogen, oxygen, and sulfur;

R 5 , R 6 , R 7 , and R 8 are independently hydrogen, halo, or C 1-4 alkyl;

each R y is independently selected from the group consisting of halo and C 1-4 alkyl;

each R x is independently selected from the group consisting of halo, —CN, C 1-4 alkyl, —OR′, and —N(R″) 2 ;

R′ is hydrogen or C 1-4 alkyl;

each R″ is independently hydrogen or C 1-4 alkyl, or two R″ are taken together with their intervening atoms to form a heterocyclic ring;

n is 0, 1, 2, or 3, as valency permits;

m is 0, 1, 2, or 3 as valency permits; and

p is 1.

13. The compound of claim 12 , wherein L is —O— or —N(R)—.

14. The compound of claim 12 , wherein R 1 is hydrogen.

15. The compound of claim 1 , wherein n is 0.

16. The compound of claim 12 , wherein R 5 , R 6 , R 7 , and R 8 are hydrogen.

17. The compound of claim 12 , wherein the compound is of formula V:

or a pharmaceutically acceptable salt thereof, wherein X 1 , X 2 , X 3 , and X 4 are independently selected from the group consisting of CH and CR Y .

18. The compound of claim 12 , wherein Cy is optionally substituted phenyl.

19. The compound of claim 12 , wherein Cy is optionally substituted 6-membered heteroaryl having 1-3 heteroatoms independently selected from nitrogen, oxygen, and sulfur.

20. A compound selected from the group consisting of:

and pharmaceutically acceptable salts thereof.

21. A pharmaceutical composition comprising a compound of claim 20 or a pharmaceutically acceptable salt thereof, and a pharmaceutically acceptable excipient.

22. The compound of claim 8 , wherein Cy is optionally substituted pyridyl or optionally substituted pyrimidyl.

23. The compound of claim 19 , wherein Cy is optionally substituted pyridyl or optionally substituted pyrimidyl.

Assignments (3)
TERMINATION AND RELEASE OF SECURITY INTEREST IN PATENTS AT REEL/FRAME: 051057/0848 Recorded Aug 13, 2022
From: BIOPHARMA CREDIT PLC
To: EPIZYME, INC.
Reel/Frame 061165/0501 →
SECURITY INTEREST Recorded Nov 19, 2019
From: EPIZYME, INC.
To: BIOPHARMA CREDIT PLC
Reel/Frame 051057/0848 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Dec 23, 2014
From: DUNCAN, KENNETH W.; CHESWORTH, RICHARD; MUNCHHOF, MICHAEL JOHN; JIN, LEI
To: EPIZYME, INC.
Reel/Frame 034577/0408 →