Ethanol production in microorganisms
The present disclosure relates to methods and compositions for engineering photoautotrophic organisms to convert carbon dioxide and light into fatty acid esters and other molecules, including biofuels. The molecules are then secreted by the organism into a growth medium.
1. A method for production of ethanol, comprising: culturing an engineered photosynthetic microbe in a culture medium in the presence of light and inorganic carbon, wherein said engineered photosynthetic microbe comprising a recombinant pyruvate decarboxylase nucleic acid sequence encoding a pyruvate decarboxylase having EC 4.1.1.1 and a recombinant alcohol dehydrogenase nucleic acid sequence encoding an alcohol dehydrogenase having EC 1.1.1.1 or EC 1.1.1.2, wherein the expression level of the alcohol dehydrogenase and the expression level of the pyruvate decarboxylase are regulated by separate promoters, wherein the expression level of alcohol dehydrogenase in the engineered photosynthetic microbe is greater than the expression level of alcohol dehydrogenase in a control engineered photosynthetic microbe comprising a recombinant alcohol dehydrogenase nucleic acid sequence and a recombinant pyruvate decarboxylase nucleic acid sequence regulated together by a single promoter, and wherein the engineered photosynthetic microbe produces ethanol in an amount greater than a non-engineered photosynthetic microbe, when cultured under identical conditions.
2. The method of claim 1 , wherein different promoters are used to achieve differential expression of each recombinant nucleic acid sequence.
3. The method of claim 2 , wherein one of the recombinant nucleic acid sequences is modulated by an inducible promoter and one of the recombinant nucleic acid sequences is modulated by a constitutive promoter.
4. The method of claim 3 , wherein the expression of the recombinant alcohol dehydrogenase nucleic acid sequence is modulated by a constitutive promoter.
5. The method of claim 3 , wherein the expression of the recombinant pyruvate decarboxylase nucleic acid sequence is modulated by a chemically-affected promoter.
6. The method of claim 5 , wherein the expression of the recombinant pyruvate decarboxylase nucleic acid sequence is modulated by an ammonia-repressible promoter.
7. The method of claim 6 , wherein the inducible promoter is nirA.
8. The method of claim 1 , wherein the recombinant alcohol dehydrogenase nucleic acid sequence and the recombinant pyruvate decarboxylase nucleic acid sequence are encoded by (1) the same plasmid, or (2) the same chromosome, or (3) separate plasmids, or (4) separately on a chromosome and a plasmid.
9. The method of claim 1 , wherein the activity of alcohol dehydrogenase is varied by controlling the level of a co-factor required by alcohol dehydrogenase.
10. The method of claim 1 , wherein the photosynthetic microbe is a thermophilic cyanobacterium or a cyanobacterium.
11. The method of claim 1 , wherein the recombinant alcohol dehydrogenase gene encodes a Moorella alcohol dehydrogenase.
12. An engineered photosynthetic microbe comprising a recombinant pyruvate decarboxylase nucleic acid sequence encoding a pyruvate decarboxylase having EC 4.1.1.1 and a recombinant alcohol dehydrogenase nucleic acid sequence encoding an alcohol dehydrogenase having EC 1.1.1.1 or EC 1.1.1.2, wherein the expression level of the alcohol dehydrogenase and the expression level of the pyruvate decarboxylase are regulated by separate promoters, wherein the expression level of alcohol dehydrogenase in the engineered photosynthetic microbe is greater than the expression level of alcohol dehydrogenase in a control engineered photosynthetic microbe comprising a recombinant alcohol dehydrogenase nucleic acid sequence and a recombinant pyruvate decarboxylase nucleic acid sequence regulated together by a single promoter, and wherein the engineered photosynthetic microbe produces ethanol in an amount greater than a non-engineered photosynthetic microbe, when cultured under identical conditions.
13. The engineered photosynthetic microbe of claim 12 , wherein the expression of alcohol dehydrogenase is driven by different promoters.
14. The engineered photosynthetic microbe of claim 12 , wherein the photosynthetic microbe lacks a functioning lactate dehydrogenase gene or lactate dehydrogenase enzyme activity.
15. The engineered photosynthetic microbe of claim 12 , wherein the photosynthetic microbe is a thermophile, a cyanobacterium, or a strain of Synechococcus.
16. The engineered photosynthetic microbe of claim 13 , wherein one of the recombinant nucleic acid sequences are modulated by an inducible promoter and one of the recombinant nucleic acid sequences is modulated by a constitutive promoter.
17. The engineered photosynthetic microbe of claim 16 , wherein the expression of the recombinant alcohol dehydrogenase nucleic acid sequence is modulated by a constitutive promoter.
18. The engineered photosynthetic microbe of claim 16 , wherein the expression of the recombinant pyruvate decarboxylase nucleic acid sequence is modulated by a chemically-affected promoter.
19. The engineered photosynthetic microbe of claim 18 , wherein the expression of the recombinant pyruvate decarboxylase nucleic acid sequence is modulated by an ammonia-repressible promoter.
20. The engineered photosynthetic microbe of claim 12 , wherein the recombinant alcohol dehydrogenase nucleic acid sequence and the recombinant pyruvate decarboxylase nucleic acid sequence are encoded by (1) the same plasmid, or (2) the same chromosome, or (3) separate plasmids, or (4) separately on a chromosome and a plasmid.