IP Library Granted Patent US 10,005,817
Granted Patent B2
US 10,005,817 · App. 14/646,246 · Granted Jun 26, 2018

Peptide pharmaceuticals

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Quick Facts
Patent No.
US 10,005,817
App. No.
14/646,246
Granted
Jun 26, 2018
Kind
B2
Abstract

Described herein are methods of syntheses and therapeutic uses of covalently modified peptides and/or proteins. The covalently modified peptides and/or proteins allow for improved pharmaceutical properties of peptide and protein-based therapeutics.

Claims (166)

1. A peptide product comprising a surfactant X covalently attached to a peptide, the peptide comprising a linker amino acid U and at least three other amino acids:

wherein X is

wherein:

A is a hydrophobic group which is a substituted or unsubstituted C 8 -C 20 alkyl group, a substituted or unsubstituted alkoxyaryl group, a substituted or unsubstituted aralkyl group, or a steroid nucleus-containing moiety, and which is attached to a saccharide at the C-1 position of the saccharide via an O- or S-glycosidic bond; and

B is a hydrophilic saccharide group covalently attached to the peptide via the carboxy terminus of the peptide or a side chain of the linker amino acid U.

2. The peptide product of claim 1 , wherein the saccharide is selected from glucose, galactose, mannose, melibiose, maltose, glucuronic acid, galacturonic acid, diglucuronic acid, mannouronic acid, melibiouronic acid and maltouronic acid.

3. The peptide product of claim 1 , wherein the surfactant is a 1-alkyl glycoside class surfactant.

4. The peptide product of claim 1 , wherein the hydrophilic group of the surfactant is attached to the peptide via an amide bond.

5. The peptide product of claim 1 , wherein the surfactant X comprises 1-eicosyl beta-D-glucuronic acid, 1-octadecyl beta-D-glucuronic acid, 1-hexadecyl beta-D-glucuronic acid, 1-tetradecyl beta D-glucuronic acid, 1-dodecyl beta D-glucuronic acid, 1-decyl beta-D-glucuronic acid, 1-octyl beta-D-glucuronic acid, 1-eicosyl beta-D-diglucuronic acid, 1-octadecyl beta-D-diglucuronic acid, 1-hexadecyl beta-D-diglucuronic acid, 1-tetradecyl beta-D-diglucuronic acid, 1-dodecyl beta-D-diglucuronic acid, 1-decyl beta-D-diglucuronic acid, 1-octyl beta-D-diglucuronic acid, 1-eicosyl beta-D-melibiouronic acid, 1-octadecyl beta-D-melibiouronic acid, 1-hexadecyl beta-D-melibiouronic acid, 1-tetradecyl beta-D-melibiouronic acid, 1-dodecyl beta-D-melibiouronic acid, 1-decyl beta-D-melibiouronic acid, 1-octyl beta-D-melibiouronic acid, or functionalized 1-ecosyl beta-D-glucose, 1-octadecyl beta-D-glucose, 1-hexadecyl beta-D-glucose, 1-tetradecyl beta-D-glucose, 1-dodecyl beta-D-glucose, 1-decyl beta-D-glucose, 1-octyl beta-D-glucose, 1-eicosyl beta-D-maltoside, 1-octadecyl beta-D-maltoside, 1-hexadecyl beta-D-maltoside, tetradecyl maltoside, 1-dodecyl beta-D-maltoside, 1-decyl beta-D-maltoside, 1-octyl beta-D-maltoside, 1-eicosyl beta-D-melibiose, 1-octadecyl beta-D-melibiose, 1-hexadecyl beta-D-melibiose, 1-tetradecyl beta-D-melibiose, 1-dodecyl beta-D-melibiose, 1-decyl beta-D-melibiose, or 1-octyl beta-D-melibiose.

6. The peptide product of claim 1 , wherein the peptide is an opioid peptide.

7. The peptide product of claim 6 , wherein the peptide product has a structure of Formula IA:

aa 1 -aa 2 -aa 3 -aa 4 -aa 5 -Z Formula IA

wherein:

each of aa 1 , aa 2 , aa 3 , aa 4 , and aa 5 is independently absent, a D- or L-natural or unnatural amino acid, an N-alkylated amino acid, an N-acetylated amino acid, a CαR 3 amino acid, a Ψ-amino acid, or a linker amino acid U covalently attached to the surfactant X;

Z is OH, NH 2 or —NHR 3 ;

each R 3 is independently substituted or unsubstituted C 1 -C 12 branched or straight chain alkyl, a PEG chain of less than 10 Da, or a substituted or unsubstituted aralkyl chain;

provided that one, or at least one, of aa 1 , aa 2 , aa 3 , aa 4 , and aa 5 is the linker amino acid U covalently attached to the surfactant X; and

further provided that not all of aa 1 , aa 2 , aa 3 , aa 4 , and aa 5 are absent.

8. A peptide product having a structure of Formula II:

aa 1 -aa 2 -aa 3 -aa 4 -aa 5 -Z Formula II

wherein:

each of aa 1 , aa 2 , aa 3 , aa 4 , and aa 5 is independently a D- or L-natural or unnatural amino acid, an N-alkylated amino acid, an N-acetylated amino acid, a CαR 3 amino acid, a Ψ-amino acid, or a linker amino acid U covalently attached to a surfactant X, or aa 5 can be absent;

Z is —OH, —NH 2 or —NHR 3 ;

each R 3 is independently substituted or unsubstituted C 1 -C 12 branched or straight chain alkyl, a PEG chain of less than 10 Da, or a substituted or unsubstituted aralkyl chain; and

X is

wherein:

A is a hydrophobic group which is a substituted or unsubstituted C 1 -C 30 alkyl group, a substituted or unsubstituted alkoxyaryl group, a substituted or unsubstituted aralkyl group, or a steroid nucleus-containing moiety, and which is attached to a saccharide at the C-1 position of the saccharide via an O- or S-glycosidic bond; and

B is a hydrophilic saccharide group covalently attached to the peptide via the carboxy terminus of the peptide or a side chain of a linker amino acid U;

provided that one, or at least one, of aa1, aa2, aa3, aa4, and aa5 is a linker amino acid U covalently attached to the surfactant X; and

further provided that at least aa 1 , aa 2 , aa 3 , and am are present.

9. The peptide product of claim 8 , wherein the peptide product has a structure of Formula III:

(SEQ. ID. NO. 1)

aa 1 -aa 2 -aa 3 -aa 4 -aa 5 -Z Formula III

wherein:

aa 1 is Tyr, Dmt, N—R 3 -Tyr, N—R 3 -Dmt, N—(R 3 ) 2 -Tyr, or N—(R 3 ) 2 -Dmt;

aa 2 is Pro, D-Arg, D-U(X), D-Ala, D-Cit, Tic, or Tic(Ψ[CH2-NH]);

aa 3 is Phe, Trp, Tmp, D- or L-Nal(1), D- or L-Nal(2), CαMePhe, or Ψ-Phe;

aa 4 is Phe, Tmp, D- or L-Nal(1), D- or L-Nal(2), U(X), or D- or L-CαMeU(X);

aa 5 is absent or Pro, Aib, U(X), or D- or L-CαMeU(X); and

U is a linker amino acid covalently attached to the surfactant X and is a dibasic or diacidic natural or unnatural amino acid, a natural or unnatural amino acid comprising a thiol, an unnatural amino acid comprising a —N 3 group, an unnatural amino acid comprising an acetylenic group, or an unnatural amino acid comprising a —NH—C(═O)—CH 2 —Br or a —(CH 2 ) m -maleimide group, wherein m is 1-10.

10. The peptide product of claim 9 , wherein X has the structure:

wherein:

A is a substituted or unsubstituted C 1 -C 30 alkyl chain, a substituted or unsubstituted alkoxyaryl group, a substituted or unsubstituted aralkyl group, or a steroid nucleus containing moiety;

R 1b , R 1c , and R 1d are each, independently at each occurrence, H, a protecting group, or a substituted or unsubstituted C 1 -C 30 alkyl group;

W 1 is independently, at each occurrence, —CH 2 —, —CH 2 —O—, —(C═O), —(C═O)—O—, —(C═O)—NH—, —(C═S)—, —(C═S)—NH—, or —CH 2 —S—;

W 2 is —O— or —S—;

R 2 is a bond, C 2 -C 4 -alkene, C 2 -C 4 -alkyne, or —(CH 2 ) m -maleimide;

m is 1-10; and

n is 1, 2 or 3.

11. The peptide product of claim 10 , wherein X has the structure:

12. The peptide product of claim 10 , wherein X has the structure:

wherein:

(1) A is a substituted or unsubstituted C 1 -C 30 alkyl group, or a steroid nucleus containing moiety;

R 1b , R 1c , and R 1d are each, independently at each occurrence, H, a protecting group, or a substituted or unsubstituted C 1 -C 30 alkyl group;

W 1 is —(C═O)—NH—;

W 2 is —O—; and

R 2 is a bond, or

(2) A is a substituted or unsubstituted C 1 -C 30 alkyl group;

R 1b , R 1c , and R 1d are H;

W 1 is —(C═O)—NH—;

W 2 is —O—; and

R 2 is a bond.

13. The peptide product of claim 10 , wherein A is a substituted or unsubstituted C 1 -C 20 alkyl group.

14. The peptide product of claim 9 , (SEQ. ID. NO. 149)

wherein:

U is a dibasic natural or unnatural amino acid;

X is a surfactant of the 1-alkyl glycoside class wherein 1-alkyl is substituted or unsubstituted C 1 -C 20 alkyl or a substituted or unsubstituted aralkyl group;

Z is NH 2 ;

aa 1 is Tyr, Dmt, Nα-Me-Tyr, Nα-Me-Dmt, N,Nα-diMe-Tyr, or N,Nα-diMe-Dmt;

aa 2 is Pro, D-Arg, D-U(X), D-Ala, D-Cit, Tic, or Tic(Ψ[CH2-NH]);

aa 3 is Phe, Trp, Tmp, D- or L-Nal(1), D- or L-Nal(2), CaMePhe, or W-Phe;

aa 4 is Phe, Tmp, D- or L-Nal(1), D- or L-Nal(2), U(X), or D- or L-CαMeU(X); and

aa 5 is absent or Pro, Aib, U(X), or D- or L-CαMeU(X).

15. The peptide product of claim 14 , (SEQ. ID. NO. 150)

wherein:

X is comprised of 1-alkyl glucuronic acid or 1-alkyl diglucuronic acid;

Z is NH 2 ;

aa 1 is Dmt;

aa 2 is Pro, D-Lys(X), Tic, or Tic(Ψ[CH2-NH]);

aa 3 is Phe, Tmp, D- or L-Nal(1), D- or L-Nal(2), or W-Phe;

aa 4 is Phe, D- or L-Nal(1), D- or L-Nal(2), or Lys(X); and

aa 5 is absent or Pro, Aib, Lys(X), or D- or L-CαMeLys(X).

16. The peptide product of claim 15 ,

wherein:

(1) aa 1 is Dmt; (SEQ. ID. NO. 151)

aa 2 is Pro;

aa 3 is Phe or Tmp;

aa 4 is Phe or Lys(X); and

aa 5 is absent or Aib, Lys(X), or D- or L-CαMeLys(X); or

(2) aa 1 is Dmt; (SEQ. ID. NO. 152)

aa 2 is Pro;

aa 3 is Phe or Tmp;

aa 4 is Phe or Lys(X); and

aa 5 is absent or Lys(X).

17. The peptide product of claim 9 , (SEQ. ID. NO. 153) wherein:

U is a dibasic natural or unnatural amino acid;

X is a surfactant of the 1-alkyl glycoside class wherein the 1-alkyl group of the 1-alkyl glycoside is substituted or unsubstituted C 1-20 alkyl or a substituted or unsubstituted aralkyl group;

aa 1 is Tyr, Dmt, N—R 3 -Tyr, N—R 3 -Dmt, N—(R 3 ) 2 -Tyr, or N—(R 3 ) 2 -Dmt;

aa 2 is D-Arg, D-Cit or D-U(X);

aa 3 is Phe, Trp, D- or L-Nal(1), D- or L-Nal(2), or Tmp;

aa 4 is Phe, Tmp, D- or L-Nal(1), D- or L-Nal(2), U(X), or D- or L-CαMeU(X); and

aa 5 is absent or Pro or U(X).

18. The peptide product of claim 17 , (SEQ. ID. NO. 154)

wherein:

X is a surfactant of the 1-alkyl glucuronic acid or 1-alkyl diglucuronic acid class;

aa 1 is Dmt, Nα-Me-Dmt, or N,Nα-diMe-Dmt;

aa 2 is D-Arg, D-Cit, D-Lys(X), or D-Orn(X);

aa 3 is Phe or Tmp;

aa 4 is Phe, Tmp, Lys(X), or Orn(X); and

aa 5 is absent or Pro, Lys(X), or Orn(X).

19. The peptide product of claim 9 ,

wherein:

(1) U is a dibasic natural or unnatural amino acid; (SEQ. ID. NO. 155)

X is a surfactant of the 1-alkyl glycoside class wherein 1-alkyl is substituted or unsubstituted C 1 -C 20 alkyl or a substituted or unsubstituted aralkyl group;

Z is NH 2 ;

aa 1 is Tyr, Dmt, N—R 3 -Tyr, N—R 3 -Dmt, N—(R 3 ) 2 -Tyr, or N—(R 3 ) 2 -Dmt;

aa 2 is Tic or Tic(Ψ[CH2-NH]);

aa 3 is Phe, Tmp, or Ψ-Phe when aa 2 is Tic(Ψ[CH2-NH]);

aa 4 is Phe, Tmp, D- or L-Nal(1), D- or L-Nal(2), or U(X); and

aa 5 is absent or Pro, Aib, or U(X); or

(2) X is a surfactant of the 1-alkyl glucuronic acid or 1-alkyl diglucuronic acid class; (SEQ. ID. NO. 156)

aa 1 is Tyr, Dmt, Nα-Me-Tyr, Nα-Me-Dmt, N,Nα-diMe-Tyr, or N,Nα-diMe-Dmt;

aa 2 is Tic or Tic(Ψ[CH2-NH]);

aa 3 is Phe, Tmp, or Ψ-Phe when aa 2 is Tic(Ψ[CH2-NH]);

aa 4 is Phe, Tmp, D- or L-Nal(1), D- or L-Nal(2), Lys(X), or Orn(X); and

aa 5 is absent or Aib, Lys(X), or Orn(X); or

(3) X comprises 1-alkyl glucuronic acid or 1-alkyl diglucuronic acid; (SEQ. ID. NO. 157)

aa 2 is Tic or Tic(Ψ[CH2-NH]);

aa 3 is Phe or Ψ-Phe;

aa 4 is Lys(X); and

aa 5 is absent.

20. The peptide product of claim 19 , (SEQ. ID. NO. 158)

wherein:

X is comprised of 1-alkyl glucuronic acid;

aa 2 is Tic;

aa 3 is Phe;

aa 4 is Lys(X); and

aa 5 is absent.

21. The peptide product of claim 20 , which is selected from:

(SEQ. ID. NO. 78)

H-Dmt-Tic-Phe-Lys(N-epsilon-1-methyl beta-D-

glucuronyl)-NH 2 ;

(SEQ. ID. NO. 80)

H-Dmt-Tic-Phe-Lys(N-epsilon-1-octyl beta-D-

glucuronyl)-NH 2 ;

(SEQ. ID. NO. 81)

H-Dmt-Tic-Phe-Lys(N-epsilon-1-decyl beta-D-

glucyronyl)-NH 2 ;

(SEQ. ID. NO. 79)

H-Dmt-Tic-Phe-Lys(N-epsilon-1-dodecyl beta-D-

glucuronyl)-NH 2 ;

(SEQ. ID. NO. 160)

H-Dmt-Tic-Phe-Lys(N-epsilon-1-tetradecyl beta-D-

glucuronyl)-NH 2 ;

(SEQ. ID. NO. 82)

H-Dmt-Tic-Phe-Lys(N-epsilon-1-hexadecyl beta-D-

glucuronyl)-NH 2 ;

(SEQ. ID. NO. 83)

H-Dmt-Tic-Phe-Lys(N-epsilon-1-octadecyl beta-D-

glucuronyl)-NH 2 ; and

(SEQ. ID. NO. 84)

H-Dmt-Tic-Phe-Lys(N-epsilon-1-eicosyl beta-D-

glucuronyl)-NH 2 .

22. A pharmaceutical composition comprising a therapeutically effective amount of a peptide product of claim 1 or a pharmaceutically acceptable salt thereof, and at least one pharmaceutically acceptable carrier or excipient.

23. The peptide product of claim 8 , which is used in the treatment of pain.

24. The peptide product of claim 1 , which displays improved duration of action, bioavailability, stability, receptor binding potency or cellular activation potency in comparison to the unmodified peptide not covalently attached to the surfactant X.

Assignments (4)
SECURITY INTEREST Recorded May 14, 2025
From: ALTIMMUNE, INC.; SPITFIRE PHARMA, LLC
To: HERCULES CAPITAL, INC., AS AGENT
Reel/Frame 071108/0692 →
AFFIDAVIT OF ADDRESS CHANGE Recorded Feb 19, 2025
From: MEDERIS DIABETES, LLC
To: MEDERIS DIABETES LLC
Reel/Frame 070266/0875 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Jul 20, 2019
From: EUMEDERIS PHARMACEUTICALS INC.
To: MEDERIS DIABETES INC.
Reel/Frame 049809/0925 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Jun 24, 2015
From: NESTOR, JOHN J.
To: EUMEDERIS PHARMACEUTICALS, INC.
Reel/Frame 036016/0858 →
Cited By (2)
US 12,257,229 US 12,551,535