Substituted 6, 5-fused bicyclic heteroaryl compounds

1. A compound of Formula (I) or a pharmaceutically acceptable salt thereof:

wherein

X 1 is NR 7 ;

X 2 is N, NR 8 , CR 8 , O, or S;

X 3 is NR 8 , CR 8 , O, or S;

X 4 is C;

Y 1 is CH;

Y 2 is CR 6 ;

Y 3 is CR 11 ;

each of R 5 , R 9 , and R 10 , independently, is H or C 1 -C 6 alkyl optionally substituted with one or more substituents selected from the group consisting of halo, hydroxyl, COOH, C(O)O—C 1 -C 6 alkyl, cyano, C 1 -C 6 alkoxyl, amino, mono-C 1 -C 6 alkylamino, di-C 1 -C 6 alkylamino, C 3 -C 8 cycloalkyl, C 6 -C 10 aryl, 4 to 12-membered heterocycloalkyl, and 5- or 6-membered heteroaryl;

each R 6 independently is H, halo, OR a , —NR a R b , —C(O)R a , —C(O)OR a , —C(O)NR a R b , —NR b C(O)R a , —S(O) 2 R a , —S(O) 2 NR a R b , or R S2 , in which each of R a and R b , independently is H or R S3 and each of R S2 and R S3 , independently, is C 1 -C 6 alkyl, C 2 -C 6 alkenyl, C 2 -C 6 alkynyl, C 3 -C 8 cycloalkyl, C 6 -C 10 aryl, 4 to 7-membered heterocycloalkyl, or 5 to 6-membered heteroaryl; or R a and R b , together with the N atom to which they are attached, form a 4 to 7-membered heterocycloalkyl ring having 0 or 1 additional heteroatoms to the N atom; and each of R S2 , R S3 , and the 4 to 7-membered heterocycloalkyl ring containing R a and R b , is optionally substituted with one or more -Q 2 -T 2 , wherein Q 2 is a bond or C 1 -C 3 alkyl linker each optionally substituted with halo, cyano, hydroxyl or C 1 -C 6 alkoxy, and T 2 is H, halo, cyano, —OR c , —NR c R d , —(NR c R d R d′ ) + A − , —C(O)R c , —C(O)OR c , —C(O)NR c R d , —NR d C(O)R c , —NR d C(O)OR c , —S(O) 2 R c , —S(O) 2 NR c R d , or R S4 , in which each of R c , R d , and R d′ , independently is H or R S5 , A − is a pharmaceutically acceptable anion, each of R S4 and R S5 , independently, is C 1 -C 6 alkyl, C 3 -C 8 cycloalkyl, C 6 -C 10 aryl, 4 to 7-membered heterocycloalkyl, or 5 to 6-membered heteroaryl, or R c and R d , together with the N atom to which they are attached, form a 4 to 7-membered heterocycloalkyl ring having 0 or 1 additional heteroatoms to the N atom, and each of R S4 , R S5 , and the 4 to 7-membered heterocycloalkyl ring containing R c and R d , is optionally substituted with one or more -Q 3 -T 3 , wherein Q 3 is a bond or C 1 -C 3 alkyl linker each optionally substituted with halo, cyano, hydroxyl or C 1 -C 6 alkoxy, and T 3 is selected from the group consisting of H, halo, cyano, C 1 -C 6 alkyl, C 3 -C 8 cycloalkyl, C 6 -C 10 aryl, 4 to 7-membered heterocycloalkyl, 5 to 6-membered heteroaryl, OR e , COOR e , —S(O) 2 R e , —NR e R f , and —C(O)NR e R f , each of R e and R f independently being H or C 1 -C 6 alkyl optionally substituted with OH, O—C 1 -C 6 alkyl, or NH—C 1 -C 6 alkyl; or -Q 3 -T 3 is oxo; or -Q 2 -T 2 is oxo; or any two neighboring -Q 2 -T 2 , together with the atoms to which they are attached form a 5- or 6-membered ring optionally containing 1-4 heteroatoms selected from N, O and S and optionally substituted with one or more substituents selected from the group consisting of halo, hydroxyl, COOH, C(O)O—C 1 -C 6 alkyl, cyano, C 1 -C 6 alkoxyl, amino, mono-C 1 -C 6 alkylamino, di-C 1 -C 6 alkylamino, C 3 -C 8 cycloalkyl, C 6 -C 10 aryl, 4 to 7-membered heterocycloalkyl, and 5 to 6-membered heteroaryl; provided that -Q 2 -T 2 is not H;

each R 7 independently is -Q 4 -T 4 , in which Q 4 is a bond, C 1 -C 4 alkyl linker, or C 2 -C 4 alkenyl linker, each linker optionally substituted with halo, cyano, hydroxyl or C 1 -C 6 alkoxy, and T 4 is H, halo, cyano, NR g R h , —OR g , —C(O)R g , —C(O)OR g , —C(O)NR g R h , —C(O)NR g OR h ,

—NR g C(O)R h , —S(O) 2 R g , or R S6 , in which each of R g and R h , independently is H or R S7 , each of R S6 and R S7 , independently is C 1 -C 6 alkyl, C 3 -C 8 cycloalkyl, C 6 -C 10 aryl, 4 to 7-membered heterocycloalkyl, or 5 to 6-membered heteroaryl, and each of R S6 and R S7 is optionally substituted with one or more -Q 5 -T 5 , wherein Q 5 is a bond, C(O), C(O)NR k , NR k C(O), NR k , S(O) 2 , NR k S(O) 2 , or C 1 -C 3 alkyl linker, R k being H or C 1 -C 6 alkyl, and T 5 is H, halo, C 1 -C 6 alkyl, C 2 -C 6 alkenyl, C 2 -C 6 alkynyl, hydroxyl, cyano, C 1 -C 6 alkoxyl, amino, mono-C 1 -C 6 alkylamino, di-C 1 -C 6 alkylamino, C 3 -C 8 cycloalkyl, C 6 -C 10 aryl, 4 to 7-membered heterocycloalkyl, or 5 to 6-membered heteroaryl and T 5 is optionally substituted with one or more substituents selected from the group consisting of halo, C 1 -C 6 alkyl, hydroxyl, cyano, C 1 -C 6 alkoxyl, amino, mono-C 1 -C 6 alkylamino, di-C 1 -C 6 alkylamino, C 3 -C 8 cycloalkyl, C 6 -C 10 aryl, 4 to 7-membered heterocycloalkyl, and 5 to 6-membered heteroaryl except when T 5 is H, halo, hydroxyl, or cyano; or -Q 5 -T 5 is oxo; provided that -Q 4 -T 4 is not H; and

each of R 8 and R 11 , independently, is H, halo, hydroxyl, COOH, cyano, R S8 , OR S8 , or COOR S8 , in which R S8 is C 1 -C 6 alkyl, C 2 -C 6 alkenyl, C 2 -C 6 alkynyl, amino, mono-C 1 -C 6 alkylamino, or di-C 1 -C 6 alkylamino, and R S8 is optionally substituted with one or more substituents selected from the group consisting of halo, hydroxyl, COOH, C(O)O—C 1 -C 6 alkyl, cyano, C 1 -C 6 alkoxyl, amino, mono-C 1 -C 6 alkylamino, and di-C 1 -C 6 alkylamino;

X is

 and

n is 0, 1, 2, 3, 4, or 5;

provided that at most one of X 2 and X 3 is O or S, at least one of X 1 , X 2 , and X 3 is N or NR 7 , and X 1 , X 2 , X 3 , X 4 , Y 1 , Y 2 , and Y 3 are assigned such that the

 moiety in Formula (I) is a bicyclic heteroaryl system.

2. The compound of claim 1 , wherein the compound is of Formula (Ia):

wherein R 7 is -Q 4 -T 4 , wherein Q 4 is a bond or methyl linker, T 4 is C 1 -C 6 alkyl optionally substituted with one or more -Q 5 -T 5 , C 3 -C 8 cycloalkyl optionally substituted with one or more -Q 5 -T 5 , or 4- to 14-membered heterocycloalkyl optionally substituted with one or more -Q 5 -T 5 .

3. The compound of claim 2 , wherein R 7 is tetrahydropyranyl, piperidine substituted by 1, 2, or 3 C 1-4 alkyl groups, or cyclohexyl substituted by N(C 1-4 alkyl) 2 wherein one or both of the C 1-4 alkyl is optionally substituted with C 1-6 alkoxyl.

4. The compound of claim 1 , wherein R 7 is sec-butyl, cyclopentyl, or iso-propyl.

5. The compound claim 1 , wherein R 6 is

6. The compound of claim 1 , wherein the compound is selected from those in Tables 2 and 3 and pharmaceutically acceptable salts thereof.

7. A pharmaceutical composition comprising a compound of claim 1 or a pharmaceutically acceptable salt thereof and a pharmaceutically acceptable carrier.