IP Library Granted Patent US 9,249,415
Granted Patent B2
US 9,249,415 · App. 14/699,140 · Granted Feb 2, 2016

Complement component C5 iRNA compositions and methods of use thereof

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Quick Facts
Patent No.
US 9,249,415
App. No.
14/699,140
Granted
Feb 2, 2016
Kind
B2
Abstract

The invention relates to iRNA, e.g., double-stranded ribonucleic acid (dsRNA), compositions targeting the complement component C5 gene, and methods of using such iRNA, e.g., dsRNA, compositions to inhibit expression of C5 and to treat subjects having a complement component C5-associated disease, e.g., paroxysmal nocturnal hemoglobinuria.

Claims (38)

1. A double-stranded ribonucleic acid (dsRNA) agent for inhibiting expression of complement component C5, wherein said dsRNA agent comprises a sense strand and an antisense strand, the antisense strand comprising a region of complementarity which comprises at least 17 contiguous nucleotides differing by no more than 3 nucleotides from the nucleotide sequence of 5′-UAUUAUAAAAAUAUCUUGCUUUU-3′ (SEQ ID NO:113), and wherein said dsRNA agent comprises at least one modified nucleotide.

2. A double-stranded ribonucleic acid (dsRNA) agent for inhibiting expression of complement component C5, wherein said dsRNA agent comprises a sense strand and an antisense strand, the antisense strand comprising a region of complementarity which comprises at least 17 contiguous nucleotides differing by no more than 3 nucleotides from the nucleotide sequence of 5′-UAUUAUAAAAAUAUCUUGCUUUU-3′ (SEQ ID NO:113),

wherein substantially all of the nucleotides of said sense strand and substantially all of the nucleotides of said antisense strand are modified nucleotides, and

wherein said sense strand is conjugated to a ligand attached at the 3′-terminus.

3. The dsRNA agent of claim 2 , wherein all of the nucleotides of said sense strand and all of the nucleotides of said antisense strand are modified nucleotides.

4. The dsRNA agent of claim 2 , wherein the modified nucleotide is selected from the group consisting of a 3′-terminal deoxy-thymine (dT) nucleotide, a 2′-O-methyl modified nucleotide, a 2′-fluoro modified nucleotide, a 2′-deoxy-modified nucleotide, a locked nucleotide, an abasic nucleotide, a 2′-amino-modified nucleotide, a 2′-alkyl-modified nucleotide, a morpholino nucleotide, a phosphoramidate, a non-natural base comprising nucleotide, a nucleotide comprising a 5′-phosphorothioate group, and a terminal nucleotide linked to a cholesteryl derivative or a dodecanoic acid bisdecylamide group.

5. The dsRNA agent of claim 4 , wherein the modified nucleotide is a 2′-O-methyl nucleotide or a 2′-fluoro nucleotide.

6. The dsRNA agent of claim 1 , wherein the region of complementarity is between 19 and 23 nucleotides in length.

7. The dsRNA agent of claim 1 , wherein each strand is no more than 30 nucleotides in length.

8. The dsRNA agent of claim 1 , wherein at least one strand comprises a 3′ overhang of at least 2 nucleotides.

9. The dsRNA agent of claim 1 , wherein said agent further comprises at least one phosphorothioate or methylphosphonate internucleotide linkage.

10. The dsRNA agent of claim 1 , further comprising a ligand.

11. The dsRNA agent of claim 10 , wherein the ligand is conjugated to the 3′ end of the sense strand of the agent.

12. The dsRNA agent of claim 11 , wherein the ligand is an N-acetylgalactosamine (GalNAc) derivative.

13. The dsRNA agent of claim 12 , wherein the ligand is

14. The dsRNA agent of claim 13 , wherein the agent is conjugated to the ligand as shown in the following schematic

and, wherein X is O or S.

15. The dsRNA agent of claim 14 , wherein the X is O.

16. The dsRNA agent of claim 1 , wherein the region of complementarity consists of the nucleotide sequence of 5′-UAUUAUAAAAAUAUCUUGCUUUU-3′ (SEQ ID NO:113).

17. The dsRNA agent of claim 1 , wherein the agent comprises a sense strand comprising the nucleotide sequence of 5′-AAGCAAGAUAUUUUUAUAAUA-3′ (SEQ ID NO:62), and an antisense strand comprising the nucleotide sequence of 5′-UAUUAUAAAAAUAUCUUGCUUUU-3′ (SEQ ID NO:113).

18. The dsRNA agent of claim 17 , wherein the sense strand comprises 5′-asasGfcAfaGfaUfAfUfuUfuuAfuAfaua-3′ (SEQ ID NO:2876) and the antisense strand comprises 5′-usAfsUfuAfuaAfaAfauaUfcUfuGfcuususudTdT-3′ (SEQ ID NO:2889),

wherein a, g, c and u are 2′-O-methyl (2′-OMe) A, G, C, and U, respectively; Af, Gf, Cf and Uf are 2′-fluoro A, G, C and U, respectively; dT is a deoxy-thymine nucleotide; and s is a phosphorothioate linkage.

19. A double-stranded ribonucleic acid (dsRNA) agent for inhibiting expression of complement component C5, wherein said dsRNA agent comprises a sense strand and an antisense strand, wherein the sense strand comprises 5′-asasGfcAfaGfaUfAfUfuUfuuAfuAfaua-3′ (SEQ ID NO:2876) and the antisense strand comprises 5′-usAfsUfuAfuaAfaAfauaUfcUfuGfcuususudTdT-3′ (SEQ ID NO:2889),

wherein a, g, c and u are 2′-O-methyl (2′-OMe) A, G, C, and U, respectively; Af, Gf, Cf and Uf are 2′-fluoro A, G, C and U, respectively; dT is a deoxy-thymine nucleotide; and s is a phosphorothioate linkage; and

wherein said sense strand is conjugated at the 3′-terminus to the ligand

20. A cell comprising the dsRNA agent of claim 19 .

21. A pharmaceutical composition for inhibiting expression of a complement component C5 gene comprising the dsRNA agent of claim 19 .

22. A method of inhibiting complement component C5 expression in a cell, the method comprising:

(a) contacting the cell with the dsRNA agent of claim 19 ; and

(b) maintaining the cell produced in step (a) for a time sufficient to obtain degradation of the mRNA transcript of a complement component C5 gene, thereby inhibiting expression of the complement component C5 gene in the cell.

23. The method of claim 22 , wherein said cell is within a subject.

24. The method of claim 22 , wherein the subject is a human.

25. A method of treating a subject having a disease or disorder that would benefit from a reduction in complement component C5 expression, the method comprising administering to the subject a therapeutically effective amount of the dsRNA agent of claim 19 , thereby treating said subject.

26. The method of claim 25 , wherein the disorder is a complement component C5-associated disease.

27. A method of preventing at least one symptom in a subject having or prone to having a disease or disorder that would benefit from a reduction in complement component C5 expression, the method comprising administering to the subject a prophylactically effective amount of the dsRNA agent of claim 19 , thereby preventing at least one symptom in the subject having or prone to having a disorder that would benefit from a reduction in C5 expression.

28. The method of claim 22 , further comprising contacting the cell with an anti-complement component C5 antibody, or antigen-binding fragment thereof.

29. The method of claim 25 , further comprising administering to the subject an anti-complement component C5 antibody, or antigen-binding fragment thereof.

30. The method of claim 27 , further comprising administering to the subject an anti-complement component C5 antibody, or antigen-binding fragment thereof.

Assignments (2)
SECURITY INTEREST Recorded Oct 1, 2025
From: ALNYLAM PHARMACEUTICALS, INC.; SIRNA THERAPEUTICS, INC.
To: BANK OF AMERICA, N.A.
Reel/Frame 072996/0337 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Oct 7, 2015
From: FITZGERALD, KEVIN; BUTLER, JAMES; BETTENCOURT, BRIAN; BORODOVSKY, ANNA; KUCHIMANCHI, SATYANARAYANA; CHARISSE, KLAUS; MANOHARAN, MUTHIAH; MAIER, MARTIN; RAJEEV, KALLANTHOTTATHIL G.; FOSTER, DONALD
To: ALNYLAM PHARMACEUTICALS, INC.
Reel/Frame 036746/0561 →