Method and magnetic resonance apparatus for reconstruction of a three-dimensional image data set from data acquired when a noise object distorted the magnetic field in the apparatus
View Patent ↗In a method for reconstruction of a three-dimensional image data set from magnetic resonance slice data of a target region acquired in target slices while a noise object distorting the magnetic field is present in the target region, for each target slice to be acquired, in addition to a central partition slice corresponding to the respective target slice, location, multiple partition slices adjacent to the central partition slice are acquired in a supplementary encoding direction perpendicular to the slice plane in multiple phase-encoding steps. A correction area and a standard reconstruction area of the target region are determined on the basis of a distortion criterion, obtained by evaluating the slice data that describes the distortion along the supplementary encoding direction. In the standard reconstruction area, only slice data are used, and in the correction area, slice data of partition slices outside the target slice are assigned to target slices in order to correct the distortion.
1. A method for reconstructing a three-dimensional magnetic resonance (MR) image data set from MR slice data, said method comprising:
operating an MR scanner, while an examination subject is situated in the MR scanner, to acquire raw MR data, as slice data, from a plurality of target slices respectively in parallel slice planes in a target region of the examination subject, including producing a magnetic field, with said MR scanner, in said target region, while a noise object is present in the MR scanner that distorts said magnetic field in said target region;
operating said MR scanner to activate a gradient magnetic field that defines a supplementary encoding direction perpendicular to said slice planes, and to acquire said slice data for each respective target slice in said plurality of target slices by acquiring MR data from a central partition slice corresponding to the respective target slice in extent and location and also acquiring MR data from a plurality of partition slices, there being no gaps between any adjacent two of said plurality of partition slices along said supplementary encoding direction, and said plurality of partition slices comprising a first partition slice that is immediately adjacent to said central partition slice along said supplementary encoding direction, by activating said gradient magnetic field in a plurality of phase-encoding steps;
providing said MR data acquired from said target region to a processor and, in said processor, evaluating the slice data to determine a distortion criterion that describes distortion along said supplementary encoding direction resulting from said distortion of said magnetic field by said noise object, and using said distortion criterion to designate a correction area and a standard reconstruction area in said target region;
in said processor, reconstructing an MR image for at least one of said target slices by applying a first reconstruction algorithm for reconstructing first image data in said standard reconstruction area, that uses only slice data of the respective target slice, and by applying a second reconstruction algorithm in said correction area, that uses slice data that are in partition slices outside of the respective target slice to correct for said distortion; and
combining the reconstructed first image data and second image data in a data file representing an MR image of the target region, and making the data file available in electronic form at an output of said processor.
2. A method as claimed in claim 1 comprising, in said processor, Fourier transforming all of said slice data and applying said distortion criterion to all of the Fourier transformed slice data.
3. A method as claimed in claim 1 comprising applying said distortion criterion to said slice data slice-by-slice.
4. A method as claimed in claim 1 wherein the slice data for each target slice represent respective pixels of the respective target slice, and applying said distortion criterion to said slice data pixel-by-pixel for each target slice, and thereby segmenting the slice data of the respective target slice into signal data and noise data.
5. A method as claimed in claim 4 comprising segmenting said slice data dependent on a threshold after Fourier transforming the slice data at least in said supplementary encoding direction.
6. A method as claimed in claim 5 comprising using, as said threshold, a percentage value determined from the slice data of the respective target slice by a statistical analysis of an area within the respective target slice surrounding a respective pixel to which the distortion criterion is being applied.
7. A method as claimed in claim 1 comprising, in said processor, determining said distortion criterion by an analysis of the slice data selected from the group consisting of a histogram analysis and a slice data progression analysis, to slice data segmented in the supplementary encoding direction, and assigning slice data to be in said standard reconstruction area when a component of the slice data, that exceeds a predetermined limit value, is situated in said central partition slice.
8. A magnetic resonance (MR) apparatus comprising:
an MR scanner;
a control computer configured to operate the MR scanner, while an examination subject is situated in the MR scanner, to acquire raw MR data, as slice data, from a plurality of target slices respectively in parallel slice planes in a target region of the examination subject, including producing a magnetic field, with said MR scanner, in said target region, while a noise object is present in the MR scanner that distorts said magnetic field in said target region;
said control computer being configured to operate said MR scanner to activate a gradient magnetic field that defines a supplementary encoding direction perpendicular to said slice planes, and to acquire said slice data for each respective target slice in said plurality of target slices by acquiring MR data from a central partition slice corresponding to the respective target slice in extent and location and also acquiring MR data from a plurality of partition slices, there being no gaps between any adjacent two of said plurality of partition slices along said supplementary encoding direction, and said plurality of partition slices comprising a first partition slice that is immediately adjacent to said central partition slice, along said supplementary encoding direction, by activating said gradient magnetic field in a plurality of phase-encoding steps;
said control computer being configured to evaluate the slice data to determine a distortion criterion that describes said distortion along said supplementary encoding direction resulting from said distortion of said magnetic field by said noise object, and using said distortion criterion to designate a correction area and a standard reconstruction area in said target region;
said control computer being configured to reconstruct an MR image for at least one of said target slices by applying a first reconstruction algorithm for reconstructing first image data in said standard reconstruction area, that uses only slice data of the respective target slice, and by applying a second reconstruction algorithm in said correction area, that uses slice data that are in partition slices outside of the respective target slice to correct for said distortion; and
said control computer being configured to combine the reconstructed first image data and second image data in a data file representing an MR image of the target region, and making the data file available in electronic form at an output of said processor.
9. A non-transitory, computer-readable data storage medium encoded with programming instructions, said storage medium being loaded into a control computer of a magnetic resonance (MR) apparatus that also comprises an MR scanner, said programming instructions causing said control computer to:
operate the MR scanner, while an examination subject is situated in the MR scanner, to acquire raw MR data, as slice data, from a plurality of target slices respectively in parallel slice planes in a target region of the examination subject, including producing a magnetic field, with said MR scanner, in said target region, while a noise object is present in the MR scanner that distorts said magnetic field in said target region;
operate the MR scanner to activate a gradient magnetic field that defines a supplementary encoding direction perpendicular to said slice planes, and to acquire said slice data for each respective target slice in said plurality of target slices by acquiring MR data from a central partition slice corresponding to the respective target slice in extent and location and also acquiring MR data from a plurality of partition slices, there being no gaps between any adjacent two of said plurality of partition slices along said supplementary encoding direction, and said plurality of partition slices comprising a first partition slice that is immediately adjacent to said central partition slice along supplementary encoding direction, by activating said gradient magnetic field in a plurality of phase-encoding steps;
evaluate the slice data to determine a distortion criterion that describes said distortion along said supplementary encoding direction resulting from said distortion of said magnetic field by said noise object, and using said distortion criterion to designate a correction area and a standard reconstruction area in said target region;
reconstruct an MR image for at least one of said target slices by applying a first reconstruction algorithm for reconstructing first image data in said standard reconstruction area, that uses only slice data of the respective target slice, and by applying a second reconstruction algorithm in said correction area, that uses slice data that are in partition slices outside of the respective target slice to correct for said distortion; and
combine the reconstructed first image data and second image data in a data file representing an MR image of the target region, and making the data file available in electronic form at an output of said processor.