IP Library Granted Patent US 9,518,040
Granted Patent B2
US 9,518,040 · App. 14/833,689 · Granted Dec 13, 2016

GDF-8 inhibitors

Inventors: Somasekhar Bhamidipati (Foster City, CA); Marina Gelman (San Francisco, CA); Pingyu Ding (Foster City, CA); Rajinder Singh (Belmont, CA); Jeffrey Clough (Redwood City, CA); Todd Kinsella (Redwood City, CA); Donald Payan (Hillsborough, CA)
Assignee: Rigel Pharmaceuticals, Inc.
C07D401/04C07D213/26C07D401/14C07D405/04C07D405/14C07D413/04C07D417/04C07D417/14C07D453/02C07D471/04C07D487/04C07D498/04C07D513/04C07F9/65038
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Quick Facts
Patent No.
US 9,518,040
App. No.
14/833,689
Granted
Dec 13, 2016
Kind
B2
Abstract

Described are GCF-8 inhibitors of the formula (I), and pharmaceutically acceptable salts thereof, wherein n, R 1 , R 2 , R 5 , R 6 , X and Z are defined herein. Also provided are pharmaceutical compositions comprising the same. Such compounds and compositions are useful in methods for inhibiting GDF-8 in a cell and methods for treating a patient suffering from a disease or disorder, wherein the patient would therapeutically benefit from an increase in mass or strength of muscle tissue.

Claims (51)

1. A compound of the formula

or a pharmaceutically acceptable salt thereof, wherein

X is N;

R 1 is halogen, cyano, nitro, C 1-6 alkyl, C 1-6 haloalkyl, C 3-8 cycloalkyl, C 3-8 cycloalkenyl, heterocyclyl, aryl, heteroaryl, —R 10 , or —C 1-6 alkyl-R 10 , wherein

R 10 is —OR, —SR, —NR a R a , —C(O)R, —C(O)OR, —C(O)NR a R a , —S(O) 2 NR a R a , —OC(O)R, —N(R)C(O)R, —OC(O)OR, —O(CH 2 ) m C(O)NR a R a , —N(R)C(O)OR, —N(R)C(O)NR a R a , —N(R)S(O) 2 NR a R a or —N(R)S(O) 2 R;

R 2 is hydrogen, halogen, cyano, nitro, C 1-6 alkyl, C 1-6 haloalkyl, C 3-8 cycloalkyl, C 3-8 cycloalkenyl, heterocyclyl, aryl, heteroaryl, —R 10 , or —C 1-6 alkyl-R 10 , wherein R 10 is —OR, —SR, —NR a R a , —C(O)R, —C(O)OR, —C(O)NR a R a , —S(O) 2 NR a R a , —OC(O)R, —N(R)C(O)R, —OC(O)OR, —O(CH 2 ) m C(O)NR a R a , —N(R)C(O)OR, —N(R)C(O)NR a R a , —N(R)S(O) 2 NR a R a or —N(R)S(O) 2 R;

or when R 1 and R 2 are attached to adjacent carbon atoms they are optionally taken together with the atoms to which they are attached to form a 5- or 6-membered ring optionally substituted with one or two groups that are each independently halogen, oxo, oxime, imino, C 1-6 alkyl, C 1-6 haloalkyl, or R 10 ;

each R a is independently R or, two R a together with the nitrogen atom to which they are attached form a 3-8 membered heterocyclyl group, optionally including 1-4 additional heteroatoms selected from O, N and S and optionally substituted with 1-4 R groups;

each R b is independently halogen, cyano, oxo, C 1-6 alkyl, C 1-6 haloalkyl, or —OR;

m is 0, 1 or 2;

n is 1, 2, 3 or 4;

R 5 and R 6 are each independently hydrogen, halogen, C 1-6 alkyl optionally substituted with 1-3 R b , C 1-6 haloalkyl, C 3-8 cycloalkyl optionally substituted with one or two R b , heteroaryl optionally substituted with one or two R b , aryl optionally substituted with one or two R b , heterocyclyl(C 1-6 alkyl) optionally substituted with one or two Rb, —OR, —SR, —NR a R a , —OC(O)R, —C(O)NR a R a , —OC(O)NR a R a , —C(O)OR, —N(R)C(O)R, —N(R)S(O) 2 R, or R 5 and R 6 are optionally taken together with the atoms to which they are attached to form a 5- or 6-membered ring optionally including 1-3 additional heteroatoms selected from O, N and S and optionally substituted with 1-4 Rb;

Z is (a) a fused bicyclic ring of the formula,

wherein

ring A is a phenyl or 5- or 6-membered heteroaryl,

ring B is a 5- or 6-membered heterocyclyl or 5- or 6-membered heteroaryl;

or (b) pyridinyl or pyrimidinyl,

wherein

Z is optionally substituted by one or two groups that are each independently halogen, C 1-6 alkyl, C 1-6 haloalkyl, C 3-8 cycloalkyl, heterocyclyl, aryl, heteroaryl, C 3-8 cycloalkyl(C 1-6 alkyl), heterocyclyl(C 1-6 alkyl), aryl(C 1-6 alkyl), heteroaryl(C 1-6 alkyl), —R Z , or —C 1-6 alkyl-R Z , wherein the C 3-8 cycloalkyl, heterocyclyl, aryl, heteroaryl, C 3-8 cycloalkyl(C 1-6 alkyl), heterocyclyl(C 1-6 alkyl), aryl(C 1-6 alkyl), and heteroaryl(C 1-6 alkyl) are each optionally substituted by one or two groups that are each independently halogen, C 1-6 alkyl, or R Z ;

and R Z is cyano, —CF 3 , —OR, —SR, —NR a R a , —C(O)R, —C(O)OR, —C(O)NR a R a , —S(O) 2 NR a R a , —S(O) 2 R 0 , —OC(O)R, —N(R)C(O)R, —OC(O)OR, —OC(O)NR a R a , —N(R)C(O)OR, —N(R)C(O)NR a R a , —N(R)S(O) 2 R, or —OP(O)(OR) 2 ;

or Z is (c) phenyl substituted with 1, 2, 3, 4, or 5 groups that are each independently a halogen;

wherein each R is independently hydrogen, C 1-6 alkyl, C 1-6 haloalkyl, C 3-8 cycloalkyl, heterocyclyl, aryl, heteroaryl, heteroaryl(heteroaryl)-, heterocyclyl(aryl)-, heteroaryl(heterocyclyl)-, C 3-8 cycloalkyl(C 1-6 alkyl), heterocyclyl(C 1-6 alkyl), aryl(C 1-6 alkyl), or heteroaryl(C 1-6 alkyl), each optionally substituted by 1-5 groups that are each independently R b , —OR 0 , —SR 0 , —N(R 0 ) 2 , —C(O)R 0 , —C(O)OR 0 , —C(O)N(R 0 ) 2 , —S(O) 2 N(R 0 ) 2 , —OC(O)R 0 , —N(R 0 )C(O)R 0 , —OC(O)OR 0 , —O(CH 2 ) m C(O)N(R 0 ) 2 , —N(R 0 )C(O)OR 0 , —N(R 0 )C(O)N(R 0 ) 2 , or —N(R 0 )S(O) 2 R 0

and each R 0 is independently hydrogen, C 1-6 haloalkyl, C 1-6 alkyl optionally substituted with 1-3 R b , C 3-8 cycloalkyl optionally substituted with one or two R b or, alternatively two R 0 together with a nitrogen atom to which they are bound form a 3-8 membered heterocyclyl group, optionally including 1-4 additional heteroatoms selected from O, N and S and optionally substituted with 0-3 R b and R groups.

2. The compound or pharmaceutically acceptable salt of claim 1 of the formula,

3. The compound or pharmaceutically acceptable salt of claim 1 , wherein R 1 is halogen, cyano, nitro, C 1-6 alkyl, C 1-6 haloalkyl, C 3-8 cycloalkyl, C 3-8 cycloalkenyl, heterocyclyl, aryl, heteroaryl, —R 10 , or —C 1-6 alkyl-R 10 , wherein R 10 is —OR, —SR, —NR 2 , —C(O)R, —C(O)OR, —C(O)NR 2 , —S(O) 2 NR 2 , —OC(O)R, —N(R)C(O)R, —OC(O)OR, —OC(O)NR 2 , —N(R)C(O)OR, —N(R)C(O)NR 2 , or —N(R)S(O) 2 R, and

R 2 is hydrogen, halogen, cyano, nitro, C 1-6 alkyl, C 1-6 haloalkyl, C 3-8 cycloalkyl, C 3-8 cycloalkenyl, heterocyclyl, aryl, heteroaryl, —R 10 , or —C 1-6 alkyl-R 10 , wherein R 10 is —OR, —SR, —NR 2 , —C(O)R, —C(O)OR, —C(O)NR 2 , —S(O) 2 NR 2 , —OC(O)R, —N(R)C(O)R, —OC(O)OR, —OC(O)NR 2 , —N(R)C(O)OR, —N(R)C(O)NR 2 , or —N(R)S(O) 2 R.

4. The compound or pharmaceutically acceptable salt of claim 1 , wherein R 1 is halogen, or C 1-6 alkyl, and R 2 is hydrogen, halogen, or C 1-6 alkyl.

5. The compound or pharmaceutically acceptable salt of claim 1 , wherein R 1 is fluoro and R 2 is methyl.

6. The compound or pharmaceutically acceptable salt of claim 1 , wherein ring A is a phenyl or pyridyl ring.

7. The compound or pharmaceutically acceptable salt of claim 1 , wherein Z is of the formula,

wherein each is optionally substituted by one or two groups that are each independently halogen, C 1-6 alkyl, C 1-6 haloalkyl, C 3-8 cycloalkyl, heterocyclyl, aryl, heteroaryl, C 3-8 cycloalkyl(C 1-6 alkyl), heterocyclyl(C 1-6 alkyl), aryl(C 1-6 alkyl), heteroaryl(C 1-6 alkyl), —R Z , or —C 1-6 alkyl-R Z , wherein the C 3-8 cycloalkyl, heterocyclyl, aryl, heteroaryl, C 3-8 cycloalkyl(C 1-6 alkyl), heterocyclyl(C 1-6 alkyl), aryl(C 1-6 alkyl), and heteroaryl(C 1-6 alkyl) are each optionally substituted by one to four groups that are each independently C 1-6 alkyl or —R Z .

8. The compound or pharmaceutically acceptable salt of claim 1 , wherein Z is of the formula,

wherein each is optionally substituted by one or two groups that are each independently halogen, C 1-6 alkyl, C 1-6 haloalkyl, C 3-8 cycloalkyl, heterocyclyl, aryl, heteroaryl, C 3-8 cycloalkyl(C 1-6 alkyl), heterocyclyl(C 1-6 alkyl), aryl(C 1-6 alkyl), heteroaryl(C 1-6 alkyl), —R Z , or —C 1-6 alkyl-R Z , wherein the C 3-8 cycloalkyl, heterocyclyl, aryl, heteroaryl, C 3-8 cycloalkyl(C 1-6 alkyl), heterocyclyl(C 1-6 alkyl), aryl(C 1-6 alkyl), and heteroaryl(C 1-6 alkyl) are each optionally substituted by one to four groups that are each independently C 1-6 alkyl or —R Z .

9. The compound or pharmaceutically acceptable salt of claim 1 , wherein Z is

wherein R Z1 is hydrogen, C 1-6 alkyl, C 1-6 haloalkyl, or —C 1-6 alkyl-R Z ; and

R Z2 is hydrogen, halogen, or C 1-6 alkyl.

10. The compound or pharmaceutically acceptable salt of claim 1 , wherein Z is

wherein

Q is —O—, —S—, or —N(R Z1 )—; and

R Z1 is hydrogen, C 1-6 alkyl, C 1-6 haloalkyl, or —C 1-6 alkyl-R Z ; and

R Z2 is hydrogen, halogen, or C 1-6 alkyl.

11. The compound or pharmaceutically acceptable salt of claim 1 , wherein Z is phenyl substituted with 1, 2, 3, 4, or 5 groups that are each independently halogen.

12. The compound or pharmaceutically acceptable salt of any one of claim 1 , wherein Z is pyridinyl or pyrimidinyl optionally substituted by one or two groups that are each independently halogen, C 1-6 alkyl, C 1-6 haloalkyl, C 3-8 cycloalkyl, heterocyclyl, aryl, heteroaryl, C 3-8 cycloalkyl(C 1-6 alkyl), heterocyclyl(C 1-6 alkyl), aryl(C 1-6 alkyl), heteroaryl(C 1-6 alkyl), —R Z , or —C 1-6 alkyl-R Z , wherein the C 3-8 cycloalkyl, heterocyclyl, aryl, heteroaryl, C 3-8 cycloalkyl(C 1-6 alkyl), heterocyclyl(C 1-6 alkyl), aryl(C 1-6 alkyl), and heteroaryl(C 1-6 alkyl) are each optionally substituted by one or two groups that are each independently halogen, C 1-6 alkyl, or —R Z ; and R Z is cyano, —CF 3 , —OR, —SR, —C(O)R, —C(O)OR, —C(O)NR a R a , —S(O) 2 NR a R a , —S(O) 2 R 0 , —OC(O)R, —N(R)C(O)R, —OC(O)OR, —OC(O)NR a R a , —N(R)C(O)OR, —N(R)C(O)NR a R a , —N(R)S(O) 2 R, or —OP(O)(OR) 2 .

13. The compound of claim 1 that is

5-(2-(6-Methylpyridin-2-yl)pyridin-3-yl)-1H-indazole;

2′-(Benzo[d][1,3]dioxol-5-yl)-6-methyl-2,3′-bipyridine;

6-(6-Methyl-[2,3′-bipyridin]-2′-yl)quinoxaline;

5-(6-Methyl-[2,3′-bipyridin]-2′-yl)-1,3-dihydro-2H-benzo[d]imidazol-2-one;

6-(6-Methyl-[2,3′-bipyridin]-2′-yl)-1H-benzo[d]imidazole;

6-(6-Methyl-[2,3′-bipyridin]-2′-yl)isoquinoline.

14. A pharmaceutical composition comprising a compound or pharmaceutically acceptable salt according to claim 1 and a pharmaceutically acceptable carrier, excipient, or diluent.

Assignments (2)
SECURITY INTEREST Recorded Aug 25, 2022
From: RIGEL PHARMACEUTICALS, INC.
To: MIDCAP FINANCIAL TRUST
Reel/Frame 061327/0712 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Nov 13, 2015
From: BHAMIDIPATI, SOMASEKHAR; GELMAN, MARINA; DING, PINGYU; SINGH, RAJINDER; CLOUGH, JEFFREY; KINSELLA, TODD; PAYAN, DONALD
To: RIGEL PHARMACEUTICALS, INC.
Reel/Frame 037038/0523 →
Continuity (3)
Division 14046834 · Oct 4, 2013
Provisional Application 61710449 · Oct 5, 2012
Related Publication 20160052909A1 · Feb 25, 2016