IP Library Patent Application 14893706
Patent Application
App. No. 14/893,706

MODULAR PROTEIN DRUG CONJUGATE THERAPEUTIC

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Patent No.
US None
App. No.
14/893,706
Abstract

The invention provides modular antibody-therapeutic agent conjugates and antibody-detectable-agent conjugates, and methods of using said conjugates in therapeutic and diagnostic procedures.

Claims (62)

1 . A conjugate comprising:

(a) a polypeptide active agent conjugation module to which one or more active agents are covalently bound, the one or more active agents selected from therapeutic agents and diagnostic agents; and

(b) a polypeptide targeting module comprising two Fc polypeptides and one or more antigen-binding domains, said targeting module covalently bound to said active agent conjugation module.

2 . The conjugate according to claim 1 , wherein said one or more active agents are therapeutic agents.

3 . The conjugate according to claim 2 , wherein said one or more therapeutic agents are selected from Maytansinoids, Auristatins, Dolastatins, Calicheaminicin, Vinca Alkaloids, kinase inhibitors, alkylating agents and purine analogs.

4 . (canceled)

5 . The conjugate according to claim 1 , wherein said targeting module is free from covalently bound active agent.

6 . (canceled)

7 . (canceled)

8 . (canceled)

9 . The conjugate according to claim 1 , wherein said active agent is bound to a cysteine, lysine, or an analog or modified version thereof.

10 . The conjugate according to claim 1 , wherein said active agent conjugation module comprises albumin or an albumin fragment.

11 . The conjugate according to claim 10 , wherein said albumin fragment comprises amino acids 381 to 585 of wild type Albumin.

12 . (canceled)

13 . The conjugate according to claim 1 , wherein a linker is interposed in said conjugate between said active agent and said active agent conjugation module; between said active agent conjugation module and said targeting module, or a combination thereof.

14 . (canceled)

15 . The conjugate according to claim 1 , wherein said targeting module is a one-armed antibody.

16 . The conjugate according to claim 15 , wherein said one-armed antibody comprises a heterodimeric Fc domain fused to a single Fab arm.

17 . (canceled)

18 . A method of treating a disease in a subject in need of such treatment, said method comprising: administering to said subject therapeutically effective amount of a conjugate according to claim 2 .

19 . (canceled)

20 . (canceled)

21 . A conjugate comprising:

(a) a polypeptide therapeutic agent conjugation module to which one or more therapeutic agents are covalently bound, said therapeutic agent conjugation module comprising albumin or an albumin fragment; and

(b) a polypeptide targeting module comprising two Fc polypeptides and one or more antigen-binding domains, said targeting module covalently bound to said therapeutic agent conjugation module, wherein at least one of said antigen-binding domains specifically binds to HER2/neu.

22 . The conjugate according to claim 21 , wherein said targeting module is a one-armed antibody comprising antigen-binding domain sequences of trastuzumab.

23 . The conjugate according to claim 21 , wherein said two Fc polypeptides form a heterodimeric Fc domain.

24 . The conjugate according to claim 21 , wherein said one or more therapeutic agents comprise a maytansoid, and said therapeutic agent conjugation module is an albumin fragment.

25 . The conjugate according to claim 21 , wherein said therapeutic agent conjugation module is covalently bound to the C-terminus or the N-terminus of said targeting module.

26 . (canceled)

27 . The conjugate according to claim 21 , wherein a linker is interposed in said conjugate between said therapeutic agent and said therapeutic agent conjugation module; between said therapeutic agent conjugation module and said targeting module, or a combination thereof.

28 . The conjugate according to claim 21 , wherein said conjugate comprises:

Heavy Chain A (SEQ. ID. NO.: 12), Heavy Chain B (SEQ. ID. NO.: 14), and light chain (SEQ. ID. NO.: 16).

29 . (canceled)

30 . (canceled)

31 . The conjugate according to claim 1 , wherein said active agent conjugation module is covalently bound to the C-terminus or the N-terminus of said targeting module.

32 . The conjugate according to claim 1 , wherein said active agent conjugation module comprises a lysine rich polypeptide.

33 . The conjugate according to claim 1 , wherein said active agent conjugation module comprises a fragment of albumin, a ubiquitin or a cell penetrating peptide.

34 . The conjugate according to claim 1 , wherein said targeting module comprises two Fc polypeptides and one antigen-binding domain.

35 . The conjugate according to claim 34 , wherein said antigen-binding domain is a Fab fragment or scFv.

36 . The conjugate according to claim 1 , wherein said two Fc polypeptides form a heterodimeric Fc domain.

37 . The conjugate according to claim 36 , wherein said heterodimeric Fc domain comprises one or more amino acid modifications in at least one CH3 sequence compared to a wild-type CH3 sequence.

38 . The conjugate according to claim 37 , wherein the heterodimeric Fc domain comprises the amino acid modifications:

(a) A:L231Y_F405A_Y407V, B:T366L_K392M_T394W;

(b) A:L231Y_F405A_Y407V, B:T366L_K392L_T394W;

(c) A:T350V_L351Y_F405A_Y407V, B:T350V_T366L_K392L_T394W;

(d) A:T350V_L351Y_F405A_Y407V, B:T350V_T366L_K392M_T394W, or

(e) A:T350V_L351Y_S400E_F405A_Y407V, B:T350V_T366L_N390R_K392M_T394W,

wherein the amino acid numbering is EU-numbering.

39 . The conjugate according to claim 1 , wherein the targeting module binds to a tumor-associated antigen.

40 . The conjugate according to claim 39 , wherein the tumor-associated antigen is an ErbB receptor associated antigen.

41 . The conjugate according to claim 21 , wherein said targeting module comprises two Fc polypeptides and one antigen-binding domain.

42 . The conjugate according to claim 41 , wherein said antigen-binding domain is a Fab fragment or scFv.

43 . The conjugate according to claim 23 , wherein said heterodimeric Fc domain comprises one or more amino acid modifications in at least one CH3 sequence compared to a wild-type CH3 sequence.

44 . The conjugate according to claim 43 , wherein the heterodimeric Fc domain comprises the amino acid modifications:

(a) A:L351Y_F405A_Y407V, B:T366L_K392M_T394W;

(b) A:L531Y_F405A_Y407V, B:T366L_K392L_T394W;

(c) A:T350V_L351Y_F405A_Y407V, B:T350V_T366L_K392L_T394W;

(d) A:T350V_L351Y_F405A_Y407V, B:T350V_T366L_K392M_T394W, or

(e) A:T350V_L351Y_S400E_F405A_Y407V, B:T350V_T366L_N390R_K392M_T394W,

wherein the amino acid numbering is EU-numbering.

45 . A method of treating cancer in a subject in need of such treatment, said method comprising: administering to said subject a therapeutically effective amount of a conjugate according to claim 21 .

Assignments (3)
RELEASE OF SECURITY INTEREST Recorded Jul 12, 2017
From: PERCEPTIVE CREDIT OPPORTUNITIES FUND, L.P.; PCOF PHOENIX II FUND, LP
To: ZYMEWORKS INC.
Reel/Frame 042982/0190 →
SECURITY AGREEMENT Recorded Jun 7, 2016
From: ZYMEWORKS INC.
To: PERCEPTIVE CREDIT OPPORTUNITIES FUND, L.P.; PCOF PHONENIX II FUND, LP
Reel/Frame 038990/0609 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Nov 24, 2015
From: DIXIT, SURJIT BHIMARAO; NG, GORDON YIU KON; BOONE, THOMAS C.; GRESSER, MICHAEL JOSEPH
To: ZYMEWORKS INC.
Reel/Frame 037132/0632 →