IP Library Granted Patent US 10,376,510
Granted Patent B2
US 10,376,510 · App. 14/903,947 · Granted Aug 13, 2019

2,4- or 4,6-diaminopyrimidine compounds as IDH2 mutants inhibitors for the treatment of cancer

Inventors: Zenon D. Konteatis (Chatham, NJ); Janeta Popovici-Muller (Windham, NH); Jeremy M. Travins (Southborough, MA)
Assignee: AGIOS PHARMACEUTICALS, INC.
A61K31/505A61K31/506A61K45/06C07D239/48C07D401/04C07D401/12C07D401/14C07D403/04C07D403/12C07D405/12C07D405/14C07D413/04C07D413/12C07D413/14C07D417/04C07D417/12C07D493/08
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Quick Facts
Patent No.
US 10,376,510
App. No.
14/903,947
Granted
Aug 13, 2019
Kind
B2
Abstract

Provided are compounds of formula (I), wherein: ring A and ring B are each independently an optionally substituted 5-6 membered monocyclic aryl or heteroaryl; one of X, Y and W is CH and the two others are N; and Z is H or —C(R1)(R2)(R3). The compounds are inhibitors of isocitrate dehydronenase 2 (IDH2) mutants useful for treating cancer.

Claims (587)

1. A compound having Formula I or a pharmaceutically acceptable salt or hydrate thereof, wherein:

ring A is an optionally substituted 6-membered monocyclic heteroaryl;

ring B is an optionally substituted 6-membered monocyclic heteroaryl;

W and X are N and Y is CH;

Z is C(R 1 )(R 2 )(R 3 );

R 1 and R 3 are each independently selected from hydrogen, C 1 -C 4 alkyl, C 1 -C 4 haloalkyl, —O—C 1 -C 4 alkyl, and CN, wherein any alkyl portion of R 1 is optionally substituted with —OH, NH 2 , NH(C 1 -C 4 alkyl), or N(C 1 -C 4 alkyl) 2 ;

R 2 is selected from: —(C 1 -C 6 alkyl), —(C 2 -C 6 alkenyl or alkynyl), —(C 1 -C 6 alkylene)-N(R 6 )—(C 1 -C 6 alkylene)-O—(C 1 -C 6 alkyl), —(C 1 -C 6 alkylene)-N(R 6 )—(C 0 -C 6 alkylene)-Q, —(C 0 -C 6 alkylene)-N(R 6 )(R 6 ), alkylene)-N(R 6 )—S(O) 1-2 -(C 1 -C 6 alkyl), —(C 1 -C 6 alkylene)-N(R 6 )—S(O) 1-2 -(C 0 -C 6 alkyl)-Q, —(C 1 -C 6 alkylene)-S(O) 1-2 —N(R 6 )(R 6 ), —(C 1 -C 4 alkylene)-S(O) 1-2 —N(R 6 )—(C 1 -C 6 alkylene)-Q, —C(O)N(R 6 )—(C 1 -C 6 alkylene)-C(O)—(C 0 -C 6 alkylene)-O—(C 1 -C 6 alkyl), —C(O)N(R 6 )—(C 1 -C 6 alkylene)-C(O)—(C 0 -C 6 alkylene)-O—(C 0 -C 6 alkylene)-Q, —(C 1 -C 6 alkylene)-O—C(O)—(C 1 -C 6 alkyl), —(C 1 -C 6 alkylene)-O—C(O)—(C 0 -C 6 alkyl)-Q, —(C 0 -C 6 alkylene)-O—(C 1 -C 6 alkyl), —(C 1 -C 6 alkylene)-O—(C 1 -C 6 alkylene)-Q, —(C 0 -C 6 alkylene)-C(O)—(C 0 -C 6 alkylene)-O—(C 1 -C 6 alkyl), —(C 0 -C 6 alkylene)-C(O)—(C 0 -C 6 alkylene)-O—(C 1 -C 6 alkylene)-Q, —(C 1 -C 6 alkylene)-O—C(O)—(C 1 -C 6 alkyl), —(C 1 -C 6 alkylene)-O—C(O)—(C 0 -C 6 alkylene)-Q, —(C 0 -C 6 alkylene)-C(O)N(R 6 )—(C 1 -C 6 alkyl), —(C 0 -C 6 alkylene)-C(O)N(R 6 )—(C 0 -C 6 alkylene)-Q, —(C 1 -C 6 alkylene)-N(R 6 )C(O)—(C 1 -C 6 alkyl), —(C 1 -C 6 alkylene)-N(R 6 )C(O)—(C 0 -C 6 alkylene)-Q, —(C 0 -C 6 alkylene)-S(O) 0-2 -(C 1 -C 6 alkyl), —(C 0 -C 6 alkylene)-S(O) 0-2 -(C 0 -C 6 alkylene)-Q, —(C 1 -C 6 alkylene)-N(R 6 )—C(O)—N(R 6 )—(C 1 -C 6 alkyl), —(C 0 -C 6 alkylene)-Q, —(C 0 -C 6 alkylene)-C(O)—(C 1 -C 6 alkyl), and —(C 0 -C 6 alkylene)-C(O)—(C 0 -C 6 alkylene)-Q, wherein:

any alkyl or alkylene moiety present in R 2 is optionally substituted with one or more —OH, —O(C 1 -C 4 alkyl) or halo;

any terminal methyl moiety present in R 2 is optionally replaced with —CH 2 OH, CF 3 , —CH 2 F, —CH 2 Cl, C(O)CH 3 , C(O)CF 3 , CN, or CO 2 H;

each R 6 is independently selected from hydrogen and C 1 -C 6 alkyl; and

Q is selected from aryl, heteroaryl, carbocyclyl and heterocyclyl, any of which is optionally substituted; or

R 1 and R 3 are optionally taken together with the carbon atom to which they are attached to form C(═O), or

R 1 and R 2 are optionally taken together to form substituted carbocyclyl or an optionally substituted heterocyclyl.

2. A compound or a pharmaceutically acceptable salt or hydrate thereof having Structural Formula (Ia) wherein:

ring A′ is 6-membered monocyclic heteroaryl optionally substituted with one or two substituents independently selected from chloro, fluoro, —CF 3 , —CHF, —CH 3 , —CH 2 CH 3 , —CF 2 CH 3 , —OH, —OCH 3 , —OCH 2 CH 3 , —NH 2 , —NH(CH 3 ), and —N(CH 3 ) 2 ;

ring B′ is selected from pyridin-2-yl, pyridin-3-yl, pyridin-4-yl, pyrimidin-4-yl, pyrimidin-5-yl and pyrimidin-6-yl, wherein ring B′ is optionally substituted with one to two substituents independently selected from halo; —CN; —OH; C 1 -C 4 alkyl optionally substituted with halo, CN, —OH, or cyclopropyl; —S(O) 2 —C 1 -C 4 alkyl; —S(O)—C 1 -C 4 alkyl; —S(O) 2 —NH—C 1 -C 4 alkyl; —S(O) 2 —N(C 1 -C 4 alkyl) 2 ; —S(O) 2 -azetidin-1-yl; —O—C 1 -C 4 alkyl; —CH 2 —O—CH 3 , morpholin-4-yl, cyclopropyl, —S(O) 2 —NH-cyclopropyl; —C(O)—O—CH 3 ;

W and X are N and Y is CH; and

is selected from C 1 -C 6 alkyl optionally substituted with halo or —OH; —(C 1 alkylene)-aryl, wherein the aryl is optionally substituted with —OH, —CH 2 OH, halo, —OCH 3 or methyl; —(C 0 -C 1 alkylene)-cycloalkyl, wherein the alkylene is optionally substituted with methyl and the cycloalkyl is optionally substituted with halo, —OCH 3 or methyl; saturated heterocyclyl optionally substituted with halo or methyl; —C(O)—C 1 -C 6 alkyl; —C(O)—O—C 1 -C 6 alkyl; —C(O)—(C 0 -C 1 alkylene)-cyclopropyl; and C(O)-benzyl.

3. The compound of claim 1 or a pharmaceutically acceptable salt or hydrate thereof, wherein R 1 is independently selected from hydrogen, —CH 3 , —CH 2 CH 3 , —CH 2 OH, CN, or R 1 and R 3 are taken together to form ═O.

4. The compound of claim 1 or a pharmaceutically acceptable salt or hydrate thereof, wherein R 1 and R 2 are taken together to form carbocyclyl or heterocyclyl, either of which is optionally substituted with up to 3 substituents independently selected from halo, C 1 -C 4 alkyl, C 1 -C 4 haloalkyl, C 1 -C 4 alkoxy, —CN, ═O, —OH, and —C(O)C 1 -C 4 alkyl.

5. The compound of claim 1 or a pharmaceutically acceptable salt or hydrate thereof, wherein R 2 is selected from: —(C 1 -C 4 alkyl) optionally substituted with fluoro or —OH; —(C 0 -C 4 alkylene)-O—(C 1 -C 4 alkyl)- and —(C 0 -C 2 alkylene)-Q, wherein Q is optionally substituted with up to 3 substituents independently selected from C 1 -C 4 alkyl, C 1 -C 4 haloalkyl, C 1 -C 4 alkoxy, ═O, —C(O)—C 1 -C 4 alkyl, —CN, and halo.

6. The compound of claim 5 or a pharmaceutically acceptable salt or hydrate thereof, wherein Q is selected from pyridinyl, tetrahydrofuranyl, cyclobutyl, cyclopropyl, phenyl, pyrazolyl, morpholinyl and oxetanyl, wherein Q is optionally substituted with up to 2 substituents independently selected from C 1 -C 4 alkyl, C 1 -C 4 alkoxy, C 1 -C 4 haloalkyl, ═O, fluoro, chloro, and bromo.

7. The compound of claim 1 or a pharmaceutically acceptable salt or hydrate thereof, wherein R 1 and R 2 are taken together to form cyclopropyl, cyclobutyl, cyclopentyl, cyclohexyl, tetrahydrofuranyl, tetrahydropyranyl, oxetanyl, bicyclo[2.2.1]heptanyl and azetidinyl, any of which is optionally substituted with up to 2 substituents independently selected from C 1 -C 4 alkyl, C 1 -C 4 alkoxy, C 3 -C 6 cycloalkyl, —OH, —C(O)CH 3 , fluoro, and chloro.

8. The compound of claim 1 or a pharmaceutically acceptable salt or hydrate thereof, wherein ring A is selected pyridinyl, pyrimidinyl and pyrazinyl wherein ring A is optionally substituted with up to two substituents independently selected from halo, —C 1 -C 4 alkyl, —C 1 -C 4 haloalkyl, —C 1 -C 4 hydroxyalkyl, —NH—S(O) 2 -(C 1 -C 4 alkyl), —S(O) 2 NH(C 1 -C 4 alkyl), —CN, —S(O) 2 -(C 1 -C 4 alkyl), C 1 -C 4 alkoxy, —NH(C 1 -C 4 alkyl), —OH, —CN, and —NH 2 .

9. The compound of claim 1 or a pharmaceutically acceptable salt or hydrate thereof, wherein ring B is selected from pyridinyl, pyrimidinyl, pyridazinyl, and pyrazinyl, wherein ring B is optionally substituted with up to two substituents independently selected from halo, —C 1 -C 4 alkyl, —C 2 -C 4 alkynyl, —C 1 -C 4 haloalkyl, —C 1 -C 4 hydroxyalkyl, C 3 -C 6 cycloalkyl, —(C 0 -C 2 alkylene)-O—C 1 -C 4 alkyl, —O—(C 1 -C 4 alkylene)-C 3 -C 6 cycloalkyl, —NH—S(O) 2 -(C 1 -C 4 alkyl), —S(O) 2 NH(C 1 -C 4 alkyl), —S(O) 2 —NH—(C 3 -C 6 cycloalkyl), —S(O) 2 -(saturated heterocyclyl), —CN, —S(O) 2 -(C 1 -C 4 alkyl), —NH(C 1 -C 4 alkyl), —N(C 1 -C 4 alkyl) 2 , —OH, C(O)—O—(C 1 -C 4 alkyl), saturated heterocyclyl, and —NH 2 .

10. The compound of claim 1 or a pharmaceutically acceptable salt or hydrate thereof, wherein ring A is selected from 6-aminopyridin-2-yl, 6-chloropyridin-2-yl and 6-trifluoromethylpyridin-2-yl.

11. The compound of claim 1 or a pharmaceutically acceptable salt or hydrate thereof, wherein ring B is selected from pyridin-2-yl, 4-chloropyridin-2-yl, 4-trifluoromethylpyridin-2-yl, 4-cyanopyridin-2-yl, 4-isopropylpyridin-2-yl, 6-chloropyridin-2-yl, 4-(1-cyanocyclopropyl)pyridin-2-yl, 4-difluoromethylpyridin-2-yl, 4-(1,1-difluoroethyl)pyridine-2-yl, 2-(morpholin-4-yl)pyridin-4-yl, 2-dimethylaminopyridin-4-yl, 5-chloropyridin-3-yl, 5-cyanopyridin-3-yl, 5-cyanopyridin-3-yl, 5-cyanopyridin-4-yl, 5-fluoropyridin-3-yl, 5-trifluoromethypyridin-3-yl, 6-chloropyridin-4-yl, 6-cyanopyridin-4-yl, 6-cyclopropylpyridin-4-yl, 6-ethoxypyridin-4-yl, 6-fluoropyridin-3-yl, 6-fluoropyridin-4-yl, 6-methylpyridin-4-yl, 6-trifluoromethylpyridin-4-yl, pyridin-4-yl, pyrimidin-4-yl and 6-(trifluoromethyl)pyrimidin-4-yl.

12. A compound or a pharmaceutically acceptable salt or hydrate thereof, having Structural Formula (Ia) wherein:

ring A′ is 6-membered monocyclic heteroaryl optionally substituted with one or two substituents independently selected from chloro, fluoro, —CF 3 , —CHF 2 , —CH 3 , —CH 2 CH 3 , —CF 2 CH 3 , —OH, —OCH 3 , —OCH 2 CH 3 , —NH 2 , —NH(CH 3 ), and —N(CH 3 ) 2 ;

ring B′ is selected from pyridin-2-yl, pyridin-3-yl, pyridin-4-yl, pyrimidin-4-yl, pyrimidin-5-yl and pyrimidin-6-yl, wherein ring B′ is optionally substituted with one to two substituents independently selected from halo; —CN; —OH; C 1 -C 4 alkyl optionally substituted with halo, CN, —OH, or cyclopropyl; —S(O) 2 —C 1 -C 4 alkyl; —S(O)—C 1 -C 4 alkyl; —S(O) 2 —NH—C 1 -C 4 alkyl; —S(O) 2 —N(C 1 -C 4 alkyl) 2 ; —S(O) 2 -azetidin-1-yl; —O—C 1 -C 4 alkyl; —CH 2 —O—CH 3 , morpholin-4-yl, cyclopropyl, —S(O) 2 —NH-cyclopropyl; —C(O)—O—CH 3 ;

W and X are N and Y is CH; and

the moiety represented by

is selected from 2-hydroxycyclopentyl, 2-methylcyclopropyl, 3,3-difluorocyclobutyl, —(CH 2 ) 3 CH 3 , —CH(CH 3 )—C(CH 3 ) 3 , —CH(CH 3 )—CH 2 OCH 3 , —C(O)—C(CH 3 ) 3 , —C(O)—CH(CH 3 ) 2 , —C(O)—CH 2 (CH)(CH 3 ) 2 , —C(O)-cyclopropyl, —C(O)—OC(CH 3 ) 3 , —C(O)—OCH 2 CH(CH 3 ) 2 , —C(O)—OCH 2 CH 3 , —C(O)—OCH(CH 3 ) 2 , —CH(CH 3 )—CH(CH 3 ) 2 , —CH(CH 3 )—CH 2 CH 3 , —CH 2 C(CH 3 ) 2 —CH 2 OH, —CH 2 C(OH)(CH 3 ) 2 , CH 2 C(CH 3 ) 3 , —CH 2 CF 3 , —CH 2 CH(CH 3 ) 2 , —CH(CH 3 ) 2 , —CH 2 CH(CH 3 )—CH 2 CH 3 , —CH 2 CH 2 CH(CH 3 ) 2 , —CH 2 -cyclopropyl,

cyclobutyl, cyclohexyl, cyclopentyl, cyclopropyl, isopropyl, oxetan-3-yl, bicyclo[12.2.1]heptanyl, tetrahydropyran-4-yl, and tetrahydropyran-3-yl.

13. A pharmaceutical composition comprising a compound of claim 1 or a pharmaceutically acceptable salt or hydrate thereof, and a pharmaceutically acceptable carrier.

14. The pharmaceutical composition of claim 13 , further comprising a second therapeutic agent useful in the treatment of cancer.

15. A compound or a pharmaceutically acceptable salt or hydrate thereof selected from the group consisting of:

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Assignments (5)
CORRECTIVE ASSIGNMENT TO CORRECT THE ASSIGNEE NAME SERVIER PHARMACEUTICALS LLC BY REMOVAL OF COMMA AND UPDATING ZIP CODE TO 02210 PREVIOUSLY RECORDED ON REEL 056224 FRAME 0921. ASSIGNOR(S) HEREBY CONFIRMS THE CORRECTIVE ASSIGNMENT. Recorded Oct 28, 2021
From: AGIOS PHARMACEUTICALS, INC.
To: SERVIER PHARMACEUTICALS LLC
Reel/Frame 057970/0314 →
CORRECTIVE ASSIGNMENT TO CORRECT THE APPLICATION NO. 10,172,864 TO THE CORRECT APP NO. 61/160,253 PREVIOUSLY RECORDED ON REEL 056179 FRAME 0417. ASSIGNOR(S) HEREBY CONFIRMS THE ASSIGNMENT. Recorded May 12, 2021
From: AGIOS PHARMACEUTICALS, INC.
To: SERVIER PHARMACEUTICALS, LLC
Reel/Frame 056224/0921 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded May 7, 2021
From: AGIOS PHARMACEUTICALS, INC.
To: SERVIER PHARMACEUTICALS, LLC
Reel/Frame 056179/0417 →
CORRECTIVE ASSIGNMENT TO CORRECT THE ASSIGNEE NAME PREVIOUSLY RECORDED AT REEL: 039454 FRAME: 0408. ASSIGNOR(S) HEREBY CONFIRMS THE ASSIGNMENT. Recorded Jun 24, 2019
From: KONTEATIS, ZENON D.; POPOVICI-MULLER, JANETA; TRAVINS, JEREMY
To: AGIOS PHARMACEUTICALS, INC.
Reel/Frame 049563/0665 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Aug 16, 2016
From: KONTEATIS, ZENON D.; POPOVICI-MULLER, JANETA; TRAVINS, JEREMY M.
To: AGIOS PHARMACEUTICALS, INC
Reel/Frame 039454/0408 →
Continuity (2)
Provisional Application 61845286 · Jul 11, 2013
Related Publication 20160158230A1 · Jun 9, 2016
Cited By (1)
US 12,433,895