Detecting a substrate
This disclosure is directed to a system and method for detecting a surface of a substrate within a scanner.
1. A method comprising:
providing a system comprising
a picker comprising a picker tip,
a slide holder comprising a substrate comprising a target analyte, and
a position detector comprising
a sensor fixed at a set distance in at least one axis relative to the slide holder, and
a target plate fixed at a set distance in at least one axis relative to the picker tip;
driving the picker towards the substrate and the target plate towards the sensor;
contacting the substrate with the picker tip; and
overtraveling the substrate with the picker tip.
2. The method of claim 1 , wherein the sensor is fixed the set distance along the z-axis relative to the slide holder, and wherein the target plate is fixed the set distance along the z-axis relative to the picker tip.
3. The method of claim 1 , wherein the driving, contact, and overtraveling steps are performed along the z-axis.
4. The method of claim 1 , further comprising locating the substrate along the first axis by determining a position along the first axis at which one of the following occurs:
(i) a current or voltage output obtained by the position detector during the overtraveling step is not equal to a current or voltage output obtained by the position detector during the driving step,
(ii) a difference between a current or voltage output obtained by the position detector during the driving step and a current or voltage output obtained by the position detector during the overtraveling step is greater than or equal to a pre-determined threshold,
(iii) a less-than-expected current or voltage output is obtained by the position detector when the picker is instructed to travel from a second position to a third position, wherein the picker contacts the substrate thereby not moving the full distance between the second and third positions, wherein an expected value is obtained when the picker moves from a first position to the second position during the driving step, and wherein the first and second positions are equal in distance to the second and third positions, or
(iv) a deviation from current or voltage outputs obtained by the position detector during the driving step and the overtraveling step, wherein the deviation is a current or voltage output obtained by the position detector during the contacting step.
5. The method of claim 4 , further comprising isolating the target analyte from the substrate with the picker.
6. The method of claim 1 , the system further comprising a piezoelectric motor to perform at least one of the driving, contacting, and overtraveling steps with the picker along the z-axis.
7. The method of claim 1 , the system further comprising a deflection detector on a side of the substrate opposite the picker tip.
8. The method of claim 1 , the system further comprising at least one motor to perform at least one of the driving, contacting, and overtraveling steps with the picker along at least one axis.
9. The method of claim 1 , further comprising isolating the target analyte from the substrate with the picker.
10. The method of claim 9 , wherein the target analyte is a cell, an ova, a circulating tumor cell, a fetal cell, a trophoblast, a nucleated red blood cell, a fetal white blood cell, a fetal red blood cell, a circulating endothelial cell, an immune cell, a naïve B cell, a memory B cell, a naïve T cell, a memory T cell, a liposome, a protein, a nucleic acid, a biological molecule, a naturally occurring microscopic unit having an enclosed membrane, an artificially prepared microscopic unit having an enclosed membrane, a parasite, a microorganism, or an inflammatory cell.
11. The method of claim 1 , wherein the target analyte is a cell, an ova, a circulating tumor cell, a fetal cell, a trophoblast, a nucleated red blood cell, a fetal white blood cell, a fetal red blood cell, a circulating endothelial cell, an immune cell, a naïve B cell, a memory B cell, a naïve T cell, a memory T cell, a liposome, a protein, a nucleic acid, a biological molecule, a naturally occurring microscopic unit having an enclosed membrane, an artificially prepared microscopic unit having an enclosed membrane, a parasite, a microorganism, or an inflammatory cell.
12. The method of claim 1 , wherein the sensor is inductive, mechanical, capacitive, optical, or acoustic.
13. The method of claim 1 , wherein the sensor is an encoder.
14. The method of claim 1 , further comprising withdrawing the picker a set amount after the contacting step.