Environmentally sensitive compositions and methods of use thereof
An environmentally sensitive membrane binding polypeptide, pH (low)-sensitive membrane peptide (pHLIP) has improved insertion kinetics balanced with solubility to selectively target acidic tissues.
1. An environmentally sensitive composition comprising a pH-triggered membrane peptide comprising
(a) at least 8 contiguous amino acids of SEQ ID NO:40, 285, 287, or 288, wherein,
(b) at least 6 of the contiguous 8 amino acids of said membrane peptide are non-polar,
(c) at least one of the at least 8 amino acids of said membrane peptide is protonatable, and
(d) the peptide has a higher affinity to a membrane lipid bilayer at pH 5.0 compared to at pH 8.0.
2. The composition of claim 1 , further comprising a single flanking domain at an N-terminus or at a C-terminus of said membrane peptide.
3. The composition of claim 2 , further comprising a first flanking domain at said C-terminus and a second flanking domain at said N-terminus.
4. The composition of claim 3 , further comprising a cargo attached to one of said flanking domains, wherein said cargo is selected from a therapeutic, diagnostic, radiation-enhancing, radiation-sensitizing, imaging, gene regulation, cytotoxic, apoptotic, or research reagent.
5. The composition of claim 4 , wherein said cargo is attached to said flanking region via a thiol linkage.
6. The composition of claim 1 , wherein one or more atoms are replaced by a radioactive isotope or a stable isotope.
7. The composition of claim 1 , wherein one or more of the amino acid side chains are chemically modified to render them radioactive or detectable by probing radiation.
8. The composition of claim 1 , comprising one or more cargoes attached to said peptide used as a therapeutic, diagnostic, imaging, immune activation, gene regulation or cell function regulation agent, radiation-enhancing agent, radiation-sensitizing agent, or as a research tool.
9. The composition of claim 1 , for use as an agent to deliver a functional cargo across cell membranes to cells in a diseased tissue with a naturally acidic extracellular environment or in a tissue with an artificially induced acidic extracellular environment relative to normal physiological pH.
10. The composition of claim 9 , wherein said diseased tissue is selected from the group consisting of inflamed tissue, ischemic tissue, arthritic tissue, tissue infected with a microorganism, and atherosclerotic tissue.
11. The composition of claim 1 , for use as an agent to deliver a functional cargo to cell surfaces in a diseased tissue with a naturally acidic extracellular environment or in a tissue with an artificially induced acidic extracellular environment relative to normal physiological pH.
12. The composition of claim 4 , wherein said cargo comprises phalloidin, phallo toxin, amanitin toxin, a DNA intercalator, or a peptide nucleic acid.
13. The composition of claim 1 , wherein said sequence comprises residues 15-22 of SEQ ID NO: 40.
14. The composition of claim 4 , wherein said cargo comprises a dye, a fluorescent protein, a nanoparticle, or a radioactive isotope.
15. The composition of claim 14 , wherein the dye is a fluorescent dye.
16. The composition of claim 14 ,
(a) comprising a dye selected from the group consisting of rhodamine, Alexa750, or Cy5.5;
(b) comprising a fluorescent protein, wherein the fluorescent protein is green fluorescent protein;
(c) comprising a nanoparticle that comprises gold; or
(d) comprising a radioactive isotope selected from the group consisting of Fluorine-18, Copper-64, Thallium-201, Iodine-123, Gallium-67, Strontium-82, Cadmium-113, Tellurium-123, Cobalt-60, or Technetium-99m.
17. The composition of claim 8 , comprising a magnetic resonance, positron emission tomography, single photon emission computed tomography, or fluorescence imaging agent.
18. The composition of claim 8 , comprising a positron emission tomography agent.
19. The composition of claim 18 , wherein said positron emission tomography agent comprises a Copper-64 or Fluorine-18 radioactive isotope.
20. A diagnostic conjugate comprising the composition of claim 1 and a pharmaceutically acceptable detectable marker linked thereto.
21. The conjugate of claim 20 , wherein said detectable marker comprises a dye.
22. The conjugate of claim 21 , wherein the dye comprises a fluorescent dye.
23. The conjugate of claim 20 , wherein said detectable marker comprises a nanoparticle.
24. A therapeutic conjugate comprising the composition of claim 1 , further comprising a first cargo comprising a cytotoxic agent and a second cargo comprising a hydrophobicity-balancing cargo.
25. The conjugate of claim 24 , wherein said cytotoxic agent is selected from the group consisting of phalloidin, phallo toxin, amanitin toxin, a boron-containing compound, and a DNA intercalator.
26. A method of guiding surgical tumor excision, comprising administering to an anatomical site comprising a tumor the conjugate of claim 4 , removing a primary tumor from said site, detecting residual tumor cells by binding of said conjugate to said residual tumor cells, and excising said residual tumor cells.
27. A method of determining the aggressiveness of a primary tumor, comprising contacting said tumor with the composition of claim 1 , wherein an increased level of binding of said composition compared to a control level of binding indicates an increased risk of metastasis from said primary tumor.
28. A method of preferentially inhibiting proliferation of tumor cells, comprising administering to a subject suffering from a tumor the composition of claim 1 , wherein tumor cells are preferentially inhibited compared to normal non-tumor cells.