IP Library Granted Patent US 10,822,399
Granted Patent B2
US 10,822,399 · App. 15/117,432 · Granted Nov 3, 2020

IgA multi-specific binding molecules

Inventors: Bruce Keyt (Hillsborough, CA); Leonard George Presta (San Francisco, CA); Fen Zhang (San Francisco, CA); Stephen F. Carroll (Walnut Creek, CA)
Assignee: IGM Biosciences, Inc.
C07K16/1282A61K47/68A61K47/6841C07K16/1018C07K16/1027A61K2039/505C07K2317/24C07K2317/31
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Quick Facts
Patent No.
US 10,822,399
App. No.
15/117,432
Granted
Nov 3, 2020
Kind
B2
Abstract

The present invention concerns IgA multi-specific binding molecules. In particular, the invention concerns multi-specific, including bispecific, binding molecules comprising IgA heavy chain sequences, and methods for their preparation and use.

Claims (49)

1. A dimeric bispecific IgA antibody comprising two binding units in end-to-end configuration and a J-chain, wherein each binding unit is bispecific, each having the same two binding specificities, AB, AB, wherein each binding unit comprises two IgA heavy chain constant region sequences each comprising at least a CA3 domain, two light chain constant region sequences, two heavy chain variable region (V H ) sequences, and two light chain variable region (V L ) sequences, wherein the V H and V L combine to form two V H V L antigen-binding regions each binding to a different epitope, wherein an asymmetric interface exists between the two IgA heavy chain constant regions in each binding unit via a knob-into-hole modification comprising:

(a) (i) a knob modification comprising a substitution of L220 with M and T236 with W; and

(ii) a hole modification comprising:

(1) a substitution of L220 with K, R, or W;

(2) a substitution of T236 with G; and/or

(3) a substitution of T282 with I, V, or L;

(b) (i) a knob modification comprising a substitution of L220 with M, H, F, or Y, T236 with F, and T282 with G; and

(ii) a hole modification comprising:

(1) a substitution of L220 with K, R, or W;

(2) a substitution of T236 with V or I; and/or

(3) a substitution of T282 with V;

(c) (i) a knob modification comprising a substitution of L220 with M, T236 with Y, and T282 with G; and

(ii) a hole modification comprising:

(1) a substitution of L220 with K, R, or W; and/or

(2) a substitution of T236 with V;

(d) (i) a knob modification comprising a substitution of L220 with F, Y, or M, T236 with S, L238 with F, and T282 with S; and

(ii) a hole modification comprising:

(1) a substitution of L220 with K, R, or W; and/or

(2) a substitution of T236 with S;

(e) (i) a knob modification comprising a substitution of L220 with W; and

(ii) a hole modification comprising:

(1) a substitution of L220 with K or R; and/or

(2) a substitution of T236 with G; or

(f) (i) a knob modification comprising a substitution of T234 with S and I284 with For W; and

(ii) a hole modification comprising:

(1) a substitution of L220 with K, R, or W;

(2) a substitution of L238 with G or A;

(3) a substitution of A280 with M; and/or

(4) a substitution of T282 with S;

wherein the amino acid numbering corresponds to SEQ ID NO: 2.

2. The dimeric bispecific IgA antibody of claim 1 , wherein the asymmetric interface between the two IgA heavy chain constant regions in each binding unit further comprises a salt-bridge charge modification, wherein the salt-bridge charge modification comprises:

(A) one of the two IgA heavy chain constant regions comprising a substitution of H218 with D or E and the other of the two IgA heavy chain constant regions comprising a substitution of E225 with K or R; or

(B) one of the two IgA heavy chain constant regions comprising a substitution of E225 with K or R, R240 with D or E, or R286 with D or E and the other of the two IgA heavy chain constant regions comprising a substitution of E225 with K or R, R240 with D or E, or R286 with D,

wherein the amino acid numbering corresponds to SEQ ID NO: 2.

3. The dimeric bispecific IgA antibody of claim 1 or claim 2 , wherein the correct association of the light chains and their cognate heavy chains is achieved by exchange of heavy-chain and light-chain domains within the antigen binding fragment (Fab) of one half of each bispecific antibody binding unit via crossover of the VH and VL domains.

4. The dimeric bispecific IgA antibody of claim 1 or claim 2 , wherein the IgA heavy chain constant regions are IgA1 heavy chain constant regions.

5. The dimeric bispecific IgA antibody of claim 1 or claim 2 , wherein the IgA heavy chain constant regions are IgA2 heavy chain constant regions.

6. The dimeric bispecific IgA antibody of claim 1 or claim 2 , wherein the J chain comprises the sequence of SEQ ID NO: 3.

7. The dimeric bispecific IgA antibody of claim 2 , wherein the heavy chain constant regions are human IgA2 constant regions comprising SEQ ID NO: 4 and SEQ ID NO: 5, respectively, and wherein the light chain constant regions each comprise SEQ ID NO: 6.

8. The dimeric bispecific IgA antibody of claim 3 , wherein the heavy chain constant regions are human IgA2 constant regions comprising SEQ ID NO: 4 and SEQ ID NO: 8, respectively, and wherein the light chain constant regions comprise SEQ ID NO: 6 and SEQ ID NO: 9, respectively.

9. The dimeric bispecific IgA antibody of claim 1 or claim 2 , which specifically binds to two different antigens of a respiratory syncytial virus (RSV).

10. The dimeric bispecific IgA antibody of claim 9 , which binds to RSV F and RSV G.

11. The dimeric bispecific IgA antibody of claim 10 , wherein each binding unit comprises the heavy chains SEQ ID NO: 10 and SEQ ID NO: 12, respectively and the light chains SEQ ID NO: 11 and SEQ ID NO: 13, respectively.

12. The dimeric bispecific IgA antibody of claim 1 or claim 2 , which specifically binds to two different hemagglutinin (HA) antigens of influenza A virus.

13. The dimeric bispecific IgA antibody of claim 12 , wherein each binding unit comprises the heavy chains SEQ ID NO: 14 and SEQ ID NO: 16, respectively and the light chains SEQ ID NO: 15 and SEQ ID NO: 17, respectively.

14. The dimeric bispecific IgA antibody of claim 1 or claim 2 , which specifically binds to two different antigens of Clostridium difficile ( C. difficile ).

15. The dimeric bispecific IgA antibody of claim 14 , which binds to Toxin A and Toxin B of C. difficile.

16. The dimeric bispecific IgA antibody of claim 15 , wherein each binding unit comprises the heavy chains SEQ ID NO: 18 and SEQ ID NO: 20, respectively and the light chains SEQ ID NO: 19 and SEQ ID NO: 21, respectively.

17. A pharmaceutical composition comprising an effective amount of the dimeric bispecific IgA antibody of claim 1 or claim 2 in admixture with a pharmaceutically acceptable carrier.

Assignments (7)
RELEASE OF SECURITY INTEREST Recorded Dec 3, 2018
From: IGM BIOSCIENCES, INC.
To: IGM BIOSCIENCES A/S
Reel/Frame 047663/0525 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Sep 10, 2018
From: IGM BIOSCIENCES A/S
To: IGM BIOSCIENCES, INC.
Reel/Frame 047044/0938 →
CORRECTIVE ASSIGNMENT TO CORRECT THE ASSIGNEE NAME PREVIOUSLY RECORDED AT REEL: 044846 FRAME: 0591. ASSIGNOR(S) HEREBY CONFIRMS THE SECURITY INTEREST. Recorded Feb 22, 2018
From: IGM BIOSCIENCES A/S
To: IGM BIOSCIENCES, INC.
Reel/Frame 045415/0838 →
CORRECTIVE ASSIGNMENT TO CORRECT THE ASSIGNEE NAME PREVIOUSLY RECORDED AT REEL: 044841 FRAME: 0203. ASSIGNOR(S) HEREBY CONFIRMS THE ASSIGNMENT . Recorded Feb 22, 2018
From: IGM BIOSCIENCES, INC.
To: IGM BIOSCIENCES A/S
Reel/Frame 045415/0858 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Feb 6, 2018
From: IGM BIOSCIENCES, INC
To: IGM BISOSCIENCES A/S
Reel/Frame 044841/0203 →
SECURITY INTEREST Recorded Feb 6, 2018
From: IGM BIOSCIENCES A/S
To: IGM BISOSCIENCES, INC.
Reel/Frame 044846/0591 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Jan 17, 2018
From: KEYT, BRUCE; PRESTA, LEONARD GEORGE; ZHANG, FEN; CARROLL, STEPHEN F.
To: IGM BIOSCIENCES, INC.
Reel/Frame 044639/0165 →
Continuity (2)
Provisional Application 61937984 · Feb 10, 2014
Related Publication 20160368971A1 · Dec 22, 2016
Cited By (1)
US 12,486,336