IP Library Granted Patent US 10,189,784
Granted Patent B2
US 10,189,784 · App. 15/129,815 · Granted Jan 29, 2019

N-(5-((aryl or heteroaryl)methyloxy)pentyl)-substituted iminosugars as inhibitors of glucosylceramide synthase

Inventors: Herman Steven Overkleeft (Netherlands, NL); Stan Van Boeckel (Netherlands, NL); Johannes Maria Franciscus Gerardus Aerts (Netherlands, NL); Amar Ghisaidoobe (Netherlands, NL); Richard Van Den Berg (Netherlands, NL)
Assignees: ACADEMISCH MEDISCH CENTRUM; UNIVERSITEIT LEIDEN
C07D211/40
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Quick Facts
Patent No.
US 10,189,784
App. No.
15/129,815
Granted
Jan 29, 2019
Kind
B2
Abstract

Deoxynojirimycin and deoxygalactonojirimycin derivatives according to the present invention are N-alkylated D-galacto, D-gluco- or L-ido-deoxynojirimycin with a linear methyloxypentyl group bearing various sidegroups and a non-fused bicyclic aromatic group (“X”) on the methyloxy-carbon. These compounds display an increased inhibitory potency towards GCS, and/or an increased inhibitory potency towards GBA2, and/or a decreased inhibitory potency towards GBA1, relative to known deoxynojirimycin derivatives of the same (D-gluco, L-ido or D-galacto) configuration. Therefore, compounds of the present invention are effective in the treatment of diseases which are associated with an irregular level of cytosolic or lysosomal glucosylceramide and/or higher glycosphingolipids, such as a lysosomal storage disorder, such as Gaucher disease, Fabry disease, Tay-Sachs disease, Sandhoff disease, GM1 gangliosidosis, Sialidosis, Niemann Pick disease type C and AMRF, or a symptom of one of the diseases collectively classed as metabolic syndrome, such as obesity, insulin resistance, hyperlipidemia, hypercholesterolemia, polycystic kidney disease, type II diabetes and chronic inflammation, or a neurodenegerative disorder, such as Parkinson disease or Lewy-body dementia.

Claims (56)

1. A compound of general structure I or Ia:

wherein:

each of R 19 -R 26 is independently selected from H, F, Me or Et;

R 27 and R 28 is independently selected from the group consisting of H, F, CF 3 and C 1 -C 8 linear or branched alkyl;

X is:

wherein

Y 1 -Y 5 are independently selected from the group of C and N-atoms provided that not more than two of Y 1 -Y 5 are a N-atom, and provided that if one or two of Y 1 -Y 5 is a N-atom, the R-group attached to that N-atom is void;

Y 6 -Y 9 are independently selected from the group of C-, S-, N- and O-atoms and comprise at least one of an S-, N- or O-atom, provided that Y 6 -Y 9 comprises at most one S-atom, at most one N-atom and/or at most one O-atom, and provided that if one of Y 6 -Y 9 is a S- or

O-atom, the R-group attached to any S-, N- and/or O-atom is void, and provided that if none of Y 6 -Y 9 is a S- or O-atom, the R-group attached to any N-atom is selected from the group consisting of H, C 1 -C 8 linear or branched alkyl, IV and V, and provided that O and S-atoms are not concomitantly present;

one of R 1 -R 9 is

and the remaining of R 1 -R 9 are independently selected from the group consisting of H, F, Cl, Br, I, CN, CF 3 , C 1 -C 8 linear or branched alkyl and C 1 -C 8 linear or branched oxyalkyl;

wherein

Y 10 -Y 14 are independently selected from the group of C- and N-atoms provided that not more than two of Y 10 -Y 14 are a N-atom, and provided that if one or two of Y 10 -Y 14 is a N-atom, the R-group attached to that N-atom is void;

Y 15 -Y 18 are independently selected from the group of C-, S-, N- and O-atoms and Y 19 is selected from the group consisting of a C-atom and a N-atom, provided that Y 15 -Y 19 comprises at most one S-atom, at most one N-atom and/or at most one O-atom, provided that if one of Y 15 -Y 19 is a S- or O-atom, the group attached to any S-, N and/or O-atom is void, and provided that if none of Y 15 -Y 19 is a S- or O-atom, the group attached to any N-atom is selected from the group consisting of H or C 1 -C 8 linear or branched alkyl, and provided that O and S-atoms are not concomitantly present;

R 10 -R 18 are independently selected from the group consisting of H, F, Cl, Br, I, CN, CF 3 , C 1 -C 8 linear or branched alkyl or C 1 -C 8 linear or branched oxyalkyl, and/or wherein two of R 10 -R 18 form a linear or branched fused alkylene or alkylenedioxy ring on two adjacent atoms of Y 10 -Y 18;

or a pharmaceutically acceptable salt, ester, hydrate, and/or solvate thereof.

2. A compound according to claim 1 , wherein X=

wherein each of the group consisting of R 1 -R 4 are independently selected from the group consisting of H, F, Cl, Br, I, CN, CF 3 , and C 1 -C 8 linear or branched alkyl, and R 10 -R 14 are independently selected from the group consisting of H, F, Cl, Br, I, CN, CF 3 , and C 1 -C 8 linear or branched alkyl and/or wherein two of the group consisting of R 10 -R 14 form a linear or branched fused alkylene or alkylenedioxy ring on two adjacent atoms.

3. A compound according to claim 2 , wherein R 27 is H and R 28 is methyl.

4. A compound according to any of claim 3 , wherein the iminosugar moiety has the L-ido configuration IX:

5. A compound according to any of claim 3 , wherein the iminosugar moiety has the D-gluco configuration XI:

6. A compound according to any of claim 5 , selected from the group consisting of

7. A compound according to any of claim 3 , selected from the group consisting of

8. A pharmaceutical composition comprising a compound according to claim 7 and a pharmaceutically acceptable excipient.

9. A method of making a compound according to claim 7 , comprising alkylation of D-gluco or L-ido deoxynojirimycin or D-galactonojirimycin with an alkyl halide of structure

wherein

Z=bromide, iodide, mesylate, tosylate or triflate;

each of R 19 -R 26 is independently selected from H, F, Me or Et;

R 27 and R 28 is independently selected from the group consisting of H, F, CF 3 and C 1 -C 8 linear or branched alkyl;

X is

wherein

Y 1 -Y 5 are independently selected from the group of C and N-atoms provided that not more than two of Y 1 -Y 5 are a N-atom, and provided that if one or two of Y 1 -Y 5 is a N-atom, the R-group attached to that N-atom is void;

Y 6 -Y 9 are independently selected from the group of C-, S-, N- and O-atoms and comprise at least one of an S-, N- or O-atom, provided that Y 6 -Y 9 comprises at most one S-atom, at most one N-atom and/or at most one O-atom, and provided that if one of Y 6 -Y 9 is a S- or O-atom, the R-group attached to any S-, N- and/or O-atom is void, and provided that if none of Y 6 -Y 9 is a S- or O-atom, the R-group attached to any N-atom is selected from the group consisting of H, C 1 -C 8 linear or branched alkyl, IV and V, and provided that O and S-atoms are not concomitantly present;

one of R 1 -R 9 is

and the remaining of R 1 -R 9 are independently selected from the group consisting of H, F, Cl, Br, I, CN, CF 3 , C 1 -C 8 linear or branched alkyl and C 1 -C 8 linear or branched oxyalkyl;

wherein

Y 10 -Y 14 are independently selected from the group of C- and N-atoms provided that not more than two of Y 10 -Y 14 are a N-atom, and provided that if one or two of Y 10 -Y 14 is a N-atom, the R-group attached to that N-atom is void;

Y 15 -Y 18 are independently selected from the group of C-, S-, N- and O-atoms and Y 19 is selected from the group consisting of a C-atom and a N-atom, provided that Y 15 -Y 19 comprises at most one S-atom, at most one N-atom and/or at most one O-atom, provided that if one of Y 15 -Y 19 is a S- or O-atom, the group attached to any S-, N and/or O-atom is void, and provided that if none of Y 15 -Y 19 is a S- or O-atom, the group attached to any N-atom is selected from the group consisting of H or C 1 -C 8 linear or branched alkyl, and provided that O and S-atoms are not concomitantly present;

R 10 -R 18 are independently selected from the group consisting of H, F, Cl, Br, I, CN, CF 3 , C 1 -C 8 linear or branched alkyl or C 1 -C 8 linear or branched oxyalkyl, and/or wherein two of R 10 -R 18 form a linear or branched fused alkylene or alkylenedioxy ring on two adjacent atoms of Y 10 -Y 18 .

10. A method of making a compound according to claim 7 , comprising alkylation of D-gluco or L-ido deoxynojirimycin or D-galactonojirimycin with an alkyl halide of structure

to form an alkylated D-gluco or L-ido deoxynojirimycin or D-galactonojirimycin

wherein

Z=mesylate, tosylate, triflate or halide, preferably Br or I

each of R 19 -R 26 is independently selected from H, F, Me or Et;

R 27 and R 28 is independently selected from the group consisting of H, F, CF 3 and C 1 -C 8 linear or branched alkyl;

T is

wherein

Y 1 -Y 5 are independently selected from the group of C and N-atoms provided that not more than two of Y 1 -Y 5 are a N-atom, and provided that if one or two of Y 1 -Y 5 is a N-atom, the R-group attached to that N-atom is void;

Y 6 -Y 9 are independently selected from the group of C-, S-, N- and O-atoms and comprise at least one of an S-, N- or O-atom, provided that Y 6 -Y 9 comprises at most one S-atom, at most one N-atom and/or at most one O-atom, and provided that if one of Y 6 -Y 9 is a S- or O-atom, the R-group attached to any S-, N- and/or O-atom is void, and provided that if none of Y 6 -Y 9 is a S- or O-atom, the R-group attached to any N-atom is selected from the group consisting of H, C 1 -C 8 linear or branched alkyl, IV and V, and provided that O and S-atoms are not concomitantly present;

one of R 1 -R 9 is a halide mesylate, tosylate or triflate, and the remaining of R 1 -R 9 are independently selected from the group consisting of H, F, Cl, Br, I, CN, CF 3 , C 1 -C 8 linear or branched alkyl and C 1 -C 8 linear or branched oxyalkyl; and

reacting the alkylated D-gluco or L-ido deoxynojirimycin or D-galactonojirimycin with a boronic acid or boronic ester selected from the group consisting of

wherein

Y 10 -Y 14 are independently selected from the group of C- and N-atoms provided that not more than two of Y 10 -Y 14 are a N-atom, and provided that if one or two of Y 10 -Y 14 is a N-atom, the R-group attached to that N-atom is void;

Y 15 -Y 18 are independently selected from the group of C-, S-, N- and O-atoms and Y 19 is selected from the group consisting of a C-atom and a N-atom, provided that Y 15 -Y 19 comprises at most one S-atom, at most one N-atom and/or at most one O-atom, provided that if one of Y 15 -Y 19 is a S- or O-atom, the group attached to any S-, N and/or O-atom is void, and provided that if none of Y 15 -Y 19 is a S- or O-atom, the group attached to any N-atom is selected from the group consisting of H or C 1 -C 8 linear or branched alkyl, and provided that O and S-atoms are not concomitantly present;

R 30 is selected from the group consisting of H, linear or branched alkyl, and an aromatic group according to general structure IV or V;

to form a compound according to claim 7 .

Assignments (3)
CHANGE OF NAME Recorded Sep 11, 2024
From: ACADEMISCH MEDISCH CENTRUM
To: STICHTING AMSTERDAM UMC
Reel/Frame 068942/0762 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Jan 15, 2019
From: VAN DEN BERG, RICHARD
To: ACADEMISCH MEDISCH CENTRUM; UNIVERSITEIT LEIDEN
Reel/Frame 048016/0227 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Nov 7, 2017
From: OVERKLEEFT, HERMAN STEVEN; BOECKEL, STAN VAN; FRANCISCUS GERARDUS AERTS, JOHANNES MARIA; GHISAIDOOBE, AMAR
To: ACADEMISCH MEDISCH CENTRUM; UNIVERSITEIT LEIDEN
Reel/Frame 044055/0412 →
Priority Claims (1)
EP 14162104 · Mar 27, 2014 · regional
Continuity (1)
Related Publication 20170226058A1 · Aug 10, 2017