Isolated T cell receptors and methods of use therefor
Provided are isolated TCRs, TCR-like molecules, and portions thereof that bind to phosphopeptide-HLA-A2 complexes. The isolated TCRs, TCR-like molecules, or portions are optionally soluble TCRs, TCR-like molecules, or portions. Also provided are isolated nucleic acids encoding the disclosed TCRs, TCR-like molecules, or portions; host cells that contain the disclosed TCRs, TCR-like molecules, or portions; pharmaceutical compositions that include the disclosed TCRs, TCR-like molecules, portions, nucleic acids, and/or T cells; kits; and methods of using the same.
1. An isolated T cell receptor (TCR), or portion thereof, that specifically binds to a phosphopeptide-HLA-A2 complex, wherein the phosphopeptide has the amino acid sequence set forth in SEQ ID NO: 12, and the isolated TCR, or portion thereof, comprises:
an alpha chain variable domain comprising a CDR1 region sequence comprising amino acids 48-53 of SEQ ID NO: 14, a CDR2 region sequence comprising amino acids 71-77 of SEQ ID NO: 14, and a CDR3 region sequence comprising amino acids 112-121 of SEQ ID NO: 14; and
a beta chain variable domain comprising a CDR1 region sequence comprising amino acids 56-60 of SEQ ID NO: 16, a CDR2 region sequence comprising amino acids 78-83 of SEQ ID NO: 16, and a CDR3 region sequence comprising amino acids 121-129 of SEQ ID NO: 16.
2. The isolated TCR, or portion thereof, of claim 1 , wherein the alpha chain variable domain comprises an amino acid sequence at least 95% identical to amino acids 22-132 of SEQ ID NO: 14.
3. The isolated TCR, or portion thereof, of claim 1 , wherein the beta chain variable domain comprises an amino acid sequence at least 95% identical to amino acids 30-138 of SEQ ID NO: 16.
4. The isolated TCR, or portion thereof, of claim 1 , wherein the alpha chain variable domain comprises an amino acid sequence at least 95% identical to amino acids 22-132 of SEQ ID NO: 14, and wherein the beta chain variable domain comprises an amino acid sequence at least 95% identical to amino acids 30-138 of SEQ ID NO: 16.
5. The isolated TCR, or portion thereof, of claim 1 , wherein the alpha chain variable domain comprises the amino acid sequence of amino acids 22-132 of SEQ ID NO: 14, and wherein the beta chain variable domain comprises the amino acid sequence of amino acids 30-138 of SEQ ID NO: 16.
6. An isolated TCR alpha chain, or portion thereof, comprising an alpha chain variable domain comprising a CDR1 region sequence comprising amino acids 48-53 of SEQ ID NO: 14, a CDR2 region sequence comprising amino acids 71-77 of SEQ ID NO: 14, and a CDR3 region sequence comprising amino acids 112-121 of SEQ ID NO: 14.
7. The isolated TCR alpha chain, or portion thereof, of claim 6 , wherein the alpha chain variable domain comprises an amino acid sequence at least 95% identical to amino acids 22-132 of SEQ ID NO: 14.
8. The isolated TCR alpha chain, or portion thereof, of claim 6 , wherein the alpha chain variable domain comprises the amino acid sequence of amino acids 22-132 of SEQ ID NO: 14.
9. An isolated TCR beta chain, or portion thereof, comprising a beta chain variable domain comprising a CDR1 region sequence comprising amino acids 56-60 of SEQ ID NO: 16, a CDR2 region sequence comprising amino acids 78-83 of SEQ ID NO: 16, and a CDR3 region sequence comprising amino acids 121-129 of SEQ ID NO: 16.
10. The isolated TCR beta chain, or portion thereof, of claim 9 , wherein the beta chain variable domain comprises an amino acid sequence at least 95% identical to amino acids 30-138 of SEQ ID NO: 16.
11. The isolated TCR beta chain, or portion thereof, of claim 9 , wherein the beta chain variable domain comprises the amino acid sequence of amino acids 30-138 of SEQ ID NO: 16.
12. The isolated TCR, or portion thereof, of claim 1 , wherein the isolated TCR, or portion thereof, is conjugated to an active agent.
13. The isolated TCR, or portion thereof, of claim 12 , wherein the active agent is a detectable label selected from the group consisting of biotin, streptavidin, an enzyme or catalytically active fragment thereof, a radionuclide, a nanoparticle, a paramagnetic metal ion, and a fluorescent, phosphorescent, or chemiluminescent molecule.
14. The isolated TCR, or portion thereof, of claim 12 , wherein the active agent is an immunostimulatory molecule.
15. The isolated TCR, or portion thereof, of claim 14 , wherein the immunostimulatory molecule is a CD3 agonist wherein said CD3 agonist is an anti-CD3 antibody.
16. The isolated TCR, or portion thereof, of claim 12 , wherein the active agent is a therapeutic agent selected from the group consisting of an alkylating agent, an antimetabolite, a natural product having pharmacological activity, a mitotic inhibitor, an antibiotic, a cytotoxic agent, and a chemotherapeutic agent.
17. The isolated TCR, or portion thereof, of claim 1 , wherein the isolated TCR, or portion thereof, is humanized, comprises a human constant domain, or both.
18. A pharmaceutical composition comprising the isolated TCR, or portion thereof, of claim 1 .
19. The pharmaceutical composition of claim 18 , wherein the pharmaceutical composition further comprises an adjuvant selected from the group consisting of montanide ISA-51, QS-21, tetanus helper peptides, GM-CSF, cyclophosamide, bacillus Calmette-Guerin (BCG), corynbacterium parvum, levamisole, azimezone, isoprinisone, dinitrochlorobenezene (DNCB), keyhole limpet hemocyanins (KLH), Freund's adjuvant (complete and incomplete), mineral gels, aluminum hydroxide (Alum), lysolecithin, pluronic polyols, polyanions, peptides, oil emulsions, dinitrophenol, diphtheria toxin (DT).
20. A kit comprising:
(i) a cytokine and/or an adjuvant; and
(ii) a composition comprising the isolated TCR, or portion thereof, of claim 1 .