Polypeptide substrate for the detection of von Williebrand factor cleaving protease ADAMTS13
View Patent ↗In a first aspect, there is provided an isolated polypeptide substrate for a disintegrin-like and metallopeptidase with thrombospondin type-1 motif, 13 (ADAMTS13) that is from 45 to 70 amino acids in length and has an amino acid sequence that is substantially similar to part of the von Willebrand factor A2 domain sequence set forth in SEQ ID NO: 2, with one or more of the following modifications: (i) the amino acid corresponding to position 1599 of SEQ ID NO: 2 is mutated from Q to K; (ii) the amino acid corresponding to position 1610 of SEQ ID NO: 2 is mutated from N to C; and (iii) the amino acids corresponding to Q1624 to R1641 of SEQ ID NO: 2 are deleted. In another aspect, there is provided an ADAMTS13 polypeptide substrate that is from 50 to 75 amino acids in length and has an amino acid sequence that is substantially similar to part of the von Willebrand factor A2 domain sequence set forth in SEQ ID NO: 2, with one or more of the following modifications: (i) the amino acid corresponding to position 1599 of SEQ ID NO: 2 is mutated from Q to K; (ii) the amino acid corresponding to position 1610 of SEQ ID NO: 2 is mutated from N to C; (iii) the amino acid corresponding to position 1629 of SEQ ID NO: 2 is mutated from G to E; and (iv) the amino acids corresponding to G1631 to R1641 of SEQ ID NO: 2 are deleted.
1. An isolated polypeptide substrate for a disintegrin-like and metallopeptidase with thrombospondin type-1 motif, 13 (ADAMTS13), wherein said polypeptide substrate is from 45 to 70 amino acids in length and comprises:
(a) the amino acid sequence set forth in SEQ ID NO:7; or
(b) an amino acid sequence that is substantially similar to SEQ ID NO:7, wherein:
(i) the amino acid corresponding to position 4 of SEQ ID NO:7 is lysine (K); and
(ii) the amino acid corresponding to position 15 of SEQ ID NO:7 is cysteine (C).
2. The polypeptide substrate of claim 1 comprising the amino acid sequence set forth in SEQ ID NO:7.
3. The polypeptide substrate of claim 1 , wherein said polypeptide substrate comprises a detectable label.
4. A kit comprising a polypeptide substrate of claim 1 and one or more calibrators containing a known concentration of ADAMTS13 activity and/or one or more positive controls for ADAMTS13 activity.
5. An isolated polypeptide substrate for a disintegrin-like and metallopeptidase with thrombospondin type-1 motif, 13 (ADAMTS13), wherein said polypeptide substrate is from 50 to 75 amino acids in length and comprises:
(a) the amino acid sequence set forth in SEQ ID NO:1; or
(b) an amino acid sequence that is substantially similar to SEQ ID NO:1, wherein:
(i) the amino acid corresponding to position 4 of SEQ ID NO:1 is lysine (K);
(ii) the amino acid corresponding to position 15 of SEQ ID NO:1 is cysteine (C); and
(iii) the amino acid corresponding to position 34 of SEQ ID NO:1 is glutamic acid (E).
6. The polypeptide substrate of claim 5 , wherein the amino acid at the N-terminus of said polypeptide substrate is aspartic acid (D).
7. The polypeptide substrate of claim 5 , wherein the amino acid at the C-terminus of said polypeptide substrate is arginine (R).
8. The polypeptide substrate of claim 5 , comprising the amino acid sequence set forth in SEQ ID NO:1.
9. The polypeptide substrate of claim 5 , wherein said polypeptide substrate comprises a detectable label.
10. The polypeptide substrate of claim 9 , wherein said detectable label comprises a fluorophore and a quencher.
11. The polypeptide substrate of claim 10 , wherein:
(i) said fluorophore is attached to cysteine (C) corresponding to position 15 of SEQ ID NO:1;
and said quencher is attached to lysine (K) corresponding to position 4 of SEQ ID NO:1; or
(ii) said quencher is attached to cysteine (C) corresponding to position 15 of SEQ ID NO:1; and
said fluorophore is attached to lysine (K) corresponding position 4 of SEQ ID NO:1.
12. A method for measuring ADAMTS13 activity in a sample comprising: contacting said sample with a polypeptide substrate of claim 5 .
13. The method of claim 12 wherein said measuring ADAMTS13 activity comprises detecting cleavage of said polypeptide substrate.
14. The method of claim 12 , wherein said polypeptide substrate is attached to a solid support.
15. The method of claim 12 , wherein said sample is a biological fluid or a tissue sample.
16. The method of claim 15 , wherein said biological fluid is a blood sample or a plasma sample.
17. The method of claim 12 , wherein said sample is obtained from a human subject.
18. A kit comprising a polypeptide substrate of claim 5 and one or more calibrators containing a known concentration of ADAMTS13 activity and/or one or more positive controls for ADAMTS13 activity.
19. The kit of claim 18 further comprising at least one of: a specimen diluent, a substrate buffer, and instructions for using said kit.
20. A method for cleaving a polypeptide comprising: contacting said polypeptide substrate of claim 5 with an ADAMTS13 protease.