Process for producing at least one metabolite of interest by conversion of a pentose in a microorganism
Disclosed is a process for producing at least one metabolite of interest by conversion of a pentose in a microorganism. The process includes at least: (i) an operation of culturing a recombinant microorganism expressing a synthetic pathway for pentose assimilation which includes at least the following steps: a) phosphorylation in position 1 of a pentose chosen from (D)-xylulose and/or (L)-ribulose, b) cleavage of the pentose-1-phosphate obtained at the end of step a), in order to obtain glycolaldehyde and dihydroxyacetone phosphate (DHAP), and (ii) an operation of recovering the at least one metabolite of interest obtained at the end of the culturing operation (i). Also disclosed is an associated microorganism.
1. Process for producing at least one of ethylene glycol and glycolic acid by converting pentose in a microorganism, said process comprising:
(i) an operation of culturing a recombinant microorganism comprising means for expressing a synthetic pathway for pentose assimilation, the operation comprising at least the following steps:
a) phosphorylation in position 1 of a pentose comprising at least one of (D)-Xylulose, and (L)-Ribulose, wherein the phosphorylation is catalyzed by a recombinantly expressed enzyme selected from the group consisting of ketohexokinase C (KhkC), rhamnulose kinase (rhaB) and fuculose kinase (fuc),
b) cleavage of the pentose-1-phosphate obtained at the end of step a) in order to obtain glycolaldehyde and dihydroxyacetone phosphate (DHAP), wherein the cleavage is catalyzed by an aldolase selected from the group consisting of aldolase B (Aldo-B) and fructose-1,6 bisphosphate aldolase (FbaB), and at least one of the following steps: c) reduction of the glycolaldehyde obtained at the end of step
b) to ethylene glycol, wherein the reduction is catalyzed by
a glycolaldehyde reductase selected from the group consisting of aldehyde reductase (YqhD), glycerol dehydrogenase (GldA) and propane-1,2-diol oxidoreductase (FucO), and
c′) oxidation of the glycolaldehyde obtained at the end of step b) to glycolic acid, wherein the oxidation step c′) is catalyzed by a glycolaldehyde dehydrogenase consisting of the lactaldehyde dehydrogenase (AldA);
(ii) an operation of recovering said at least one of ethylene glycol and glycolic acid obtained at the end of the culturing operation (i).
2. Process for producing at least one metabolite of interest according to claim 1 , wherein:
the step a) is catalyzed by ketohexokinase C, and
the step b) is catalyzed by at least one of aldolase B (Aldo-B) and fructose 1,6 bisphosphate aldolase B.
3. Process for producing at least one metabolite of interest according to claim 1 , wherein the microorganism is cultured on a carbon medium containing at least one of (D)-Xylose and (L)-Arabinose.
4. Process for producing at least one metabolite of interest according to claim 3 , wherein the culture medium comprises a biomass hydrolysate comprising hemicellulose.
5. Process for producing at least one metabolite of interest according to claim 1 , wherein said synthetic pathway for pentose assimilation comprises, prior to step a), at least one of the following steps:
a step of converting (D)-Xylose into (D)-Xylulose, and
a step of converting (L)-Arabinose into (L)-Ribulose.
6. Process for producing at least one metabolite of interest according to claim 1 , wherein the recombinant microorganism is selected from E. coli, S. cerevisiae and Scheffersomyces stipitis.
7. Process for producing at least one metabolite of interest according to claim 1 , wherein the recombinant microorganism consists in a microorganism whose endogenous kinase activities of at least one of (D)-xylulose-5 kinase and (L)-ribulose-5 kinase were suppressed, wherein the suppression is defined by a residual kinase activity of less than 20% of the endogenous activity.