Pyrrolopyrimidine nucleosides and analogs thereof
View Patent ↗The present disclosure provides pyrrolopyrimidine nucleoside analogs of the Formula I, Formula IA, Formula IB, or Formula II and phospholipid conjugates and pharmaceutical compositions thereof wherein R c and A are defined herein. Also presented are methods of treating and/or preventing viral infection and/or viral infection-associated disease or disorder with one or more compounds of Formula I, Formula IA, Formula IB, or Formula II.
1. A method of treating a viral infection comprising administering to a subject in need thereof an effective amount of a compound of Formula IB
or a pharmaceutically acceptable salt, solvate, enantiomer, diastereomer, racemate or mixture thereof, wherein:
A is:
X 1 is CR 11 R 12 — or —OCH 2 CH 2 — wherein the oxygen atom is distal to the R IB moiety in A;
R 11 and R 12 are independently hydrogen or C 1 -C 4 alkyl, wherein the alkyl is optionally substituted with one or more halogen, —OH, —SH, or —NH 2 ;
X 2 is absent, —O—, —C(O)O—, or —OCH 2 — wherein the oxygen atom is distal to the R IB moiety in A;
each R IB independently is hydrogen, —C 1 -C 6 alkyl,
or R IB is an amino acid residue bound via the carbonyl group, wherein the alkyl is optionally substituted with one or more halogen, —OH, —SH, or —NH 2 ;
v is 0 or 1;
n is 0, 1, 2, or 3 and when X 2 is —C(O)O—, n is 0;
p is 2, 3, 4, 5, 6, 7, 8, 9, 10, or 11;
q is 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, or 18;
R z is hydrogen, halogen, —C 1 -C 4 alkylthio, —C 1 -C 4 alkoxy, —C 1 -C 4 alkyl, —C 2 -C 4 alkenyl, —C 2 -C 4 alkynyl, aryl, heteroaryl, —C 3 -C 8 cycloalkyl, —C 4 -C 8 cycloalkenyl, or 3- to 5-membered nonaromatic heterocycle, wherein each alkylthio, alkoxy, alkyl, alkenyl, alkynyl, aryl, heteroaryl, cycloalkyl, cycloalkenyl, or heterocycle is optionally substituted with one or more halogen, —OH, —SH, or —NH 2 ;
R a , R b , R x , and R y are each independently selected from the group consisting of hydrogen, halogen, —OH, —SH, —C 1 -C 6 alkoxy, aryloxy, —C 1 -C 6 alkylthio, arylthio, —OC(O)C 1 -C 6 alkyl, —OC(O)aryl, —C 1 -C 6 alkyl, —C 2 -C 6 alkenyl, —C 2 -C 6 alkynyl, aryl, heteroaryl, —C 3 -C 8 cycloalkyl, and —C 4 -C 8 cycloalkenyl, wherein each alkoxy, aryloxy, alkylthio, arylthio, alkyl, aryl, alkenyl, alkynyl, heteroaryl, cycloalkyl, or cycloalkenyl is optionally substituted with one or more halogen, —OH, —SH, or —NH 2 ;
or any two R a or R b , together with the atom to which they are both attached, can combine to form a C 3 -C 8 spirocycloalkyl or 3- to 8-membered spiroheterocycle;
or any two R a or R b , when on adjacent atoms, can combine to form a cis- or trans-carbon-carbon double bond or a carbon-carbon triple bond;
or any two R a or R b , when on adjacent atoms, can combine to form an aryl, heteroaryl, —C 3 -C 10 cycloalkyl, —C 4 -C 10 cycloalkenyl, or 5- to 10-membered ring heterocycle;
or any CR a R b can be replaced by —O—, —S—, —S(O)—, or —SO 2 —;
or any two R x or R y , together with the atom to which they are both attached, can combine to form a —C 3 -C 8 spirocycloalkyl or 3- to 8-membered spiroheterocycle;
or any two R x or R y , when on adjacent atoms, can combine to form a cis- or trans-carbon-carbon double bond or a carbon-carbon triple bond;
or any two R x or R y , when on adjacent atoms, can combine to form an aryl, heteroaryl, —C 3 -C 10 cycloalkyl, —C 4 -C 10 cycloalkenyl, or 5- to 10-membered ring heterocycle;
or any CR x R y can be replaced by —O—, —S—, —S(O)—, or —SO 2 —;
R 1 and R 45 are each independently hydrogen, halogen, —N 3 , —OH, —NH 2 , —SH, —C 1 -C 6 alkyl, —C 3 -C 6 cycloalkyl, —C 2 -C 6 alkenyl, —C 4 -C 8 cycloalkenyl, —C 2 -C 6 alkynyl, —C 8 -C 11 cycloalkynyl, —C 1 -C 6 alkoxy, or —C 1 -C 6 alkylthio wherein each alkyl, cycloalkyl, alkenyl, cycloalkenyl, alkynyl, cycloalkynyl, alkoxy or alkylthio is independently substituted with one or more halogen, —N 3 , —OH, —NH 2 , or —SH;
R 2 , R 3 , R 4 and R 44 are each independently hydrogen, halogen, —N 3 , —OH, —NH 2 , —SH, C 1 -C 6 alkoxy, or —C 1 -C 6 alkylthio, wherein each alkyl, alkoxy, or alkylthio is optionally substituted with one or more halogen, —N 3 , —OH, —NH 2 , or —SH;
or R 3 and one of R 4 and R 44 , together with the atoms to which they are attached can form a carbon-carbon double bond;
R 5 is independently hydrogen, —R IB , M + , aryl, aralkyl, —C 1 -C 6 alkyl, —C 1 -C 6 heteroalkyl, cycloalkyl, non-aromatic heterocyclic ring, or heteroaryl, wherein M + is a cation and wherein each aryl, aralkyl, alkyl, heteroalkyl, cycloalkyl, heterocycle, or heteroaryl is optionally substituted with one or more halogen, —N 3 , —OH, —NH 2 , or —SH, and wherein R 5 is not an amino acid; and
R c is —C 1 -C 6 alkyl, —C 3 -C 6 cycloalkyl, —C 2 -C 6 alkenyl, —C 4 -C 8 cycloalkenyl, —C 2 -C 6 alkynyl, —C 8 -C 12 cycloalkynyl, or aryl, wherein each alkyl, cycloalkyl, alkenyl, cycloalkenyl, or aryl is optionally substituted with one or more halogen, —N 3 , —OH, —NH 2 , or —SH;
wherein the subject exhibits early signs of the infection.
2. The method of claim 1 , wherein the viral infection is norovirus infection.
3. The method of claim 1 , wherein the subject is dosed for five weeks or less.
4. A method of preventing a viral infection comprising administering to a subject in need thereof an effective amount of a compound of Formula IB
or a pharmaceutically acceptable salt, solvate, enantiomer, diastereomer, racemate or mixture thereof, wherein:
A is:
X 1 is —CR 11 R 12 — or —OCH 2 CH 2 — wherein the oxygen atom is distal to the R IB moiety in A;
R 11 and R 12 are independently hydrogen or C 1 -C 4 alkyl, wherein the alkyl is optionally substituted with one or more halogen, —OH, —SH, or —NH 2 ;
X 2 is absent, —O—, —C(O)O—, or —OCH 2 — wherein the oxygen atom is distal to the R IB moiety in A;
each R IB independently is hydrogen, —C 1 -C 6 alkyl,
or R IB is an amino acid residue bound via the carbonyl group, wherein the alkyl is optionally substituted with one or more halogen, —OH, —SH, or —NH 2 ;
v is 0 or 1;
n is 0, 1, 2, or 3 and when X 2 is —C(O)O—, n is 0;
p is 2, 3, 4, 5, 6, 7, 8, 9, 10, or 11;
q is 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, or 18;
R z is hydrogen, halogen, —C 1 -C 4 alkylthio, —C 1 -C 4 alkoxy, —C 1 -C 4 alkyl, —C 2 -C 4 alkenyl, —C 2 -C 4 alkynyl, aryl, heteroaryl, —C 3 -C 8 cycloalkyl, —C 4 -C 8 cycloalkenyl, or 3- to 5-membered nonaromatic heterocycle, wherein each alkylthio, alkoxy, alkyl, alkenyl, alkynyl, aryl, heteroaryl, cycloalkyl, cycloalkenyl, or heterocycle is optionally substituted with one or more halogen, —OH, —SH, or —NH 2 ;
R a , R b , R x , and R y are each independently selected from the group consisting of hydrogen, halogen, —OH, —SH, —C 1 -C 6 alkoxy, aryloxy, —C 1 -C 6 alkylthio, arylthio, —OC(O)C 1 -C 6 alkyl, —OC(O)aryl, —C 1 -C 6 alkyl, —C 2 -C 6 alkenyl, —C 2 -C 6 alkynyl, aryl, heteroaryl, —C 3 -C 8 cycloalkyl, and —C 4 -C 8 cycloalkenyl, wherein each alkoxy, aryloxy, alkylthio, arylthio, alkyl, aryl, alkenyl, alkynyl, heteroaryl, cycloalkyl, or cycloalkenyl is optionally substituted with one or more halogen, —OH, —SH, or —NH 2 ;
or any two R a or R b , together with the atom to which they are both attached, can combine to form a C 3 -C 8 spirocycloalkyl or 3- to 8-membered spiroheterocycle;
or any two R a or R b , when on adjacent atoms, can combine to form a cis- or trans-carbon-carbon double bond or a carbon-carbon triple bond;
or any two R a or R b , when on adjacent atoms, can combine to form an aryl, heteroaryl, —C 3 -C 10 cycloalkyl, —C 4 -C 10 cycloalkenyl, or 5- to 10-membered ring heterocycle;
or any CR a R b can be replaced by —O—, —S—, —S(O)—, or —SO 2 —;
or any two R x or R y , together with the atom to which they are both attached, can combine to form a —C 3 -C 8 spirocycloalkyl or 3- to 8-membered spiroheterocycle;
or any two R x or R y , when on adjacent atoms, can combine to form a cis- or trans-carbon-carbon double bond or a carbon-carbon triple bond;
or any two R x or R y , when on adjacent atoms, can combine to form an aryl, heteroaryl, —C 3 -C 10 cycloalkyl, —C 4 -C 10 cycloalkenyl, or 5- to 10-membered ring heterocycle;
or any CR x R y can be replaced by —O—, —S—, —S(O)—, or —SO 2 —;
R 1 and R 45 are each independently hydrogen, halogen, —N 3 , —OH, —NH 2 , —SH, —C 1 -C 6 alkyl, —C 3 -C 6 cycloalkyl, —C 2 -C 6 alkenyl, —C 4 -C 8 cycloalkenyl, —C 2 -C 6 alkynyl, —C 8 -C 12 cycloalkynyl, —C 1 -C 6 alkoxy, or —C 1 -C 6 alkylthio wherein each alkyl, cycloalkyl, alkenyl, cycloalkenyl, alkynyl, cycloalkynyl, alkoxy or alkylthio is independently substituted with one or more halogen, —N 3 , —OH, —NH 2 , or —SH;
R 2 , R 3 , R 4 and R 44 are each independently hydrogen, halogen, —N 3 , —OH, —NH 2 , —SH, —C 1 -C 6 alkyl, —C 1 -C 6 alkoxy, or —C 1 -C 6 alkylthio, wherein each alkyl, alkoxy, or alkylthio is optionally substituted with one or more halogen, —N 3 , —OH, —NH 2 , or —SH;
or R 3 and one of R 4 and R 44 , together with the atoms to which they are attached can form a carbon-carbon double bond;
R 5 is independently hydrogen, —R IB , M + , aryl, aralkyl, —C 1 -C 6 alkyl, —C 1 -C 6 heteroalkyl, cycloalkyl, non-aromatic heterocyclic ring, or heteroaryl, wherein M + is a cation and wherein each aryl, aralkyl, alkyl, heteroalkyl, cycloalkyl, heterocycle, or heteroaryl is optionally substituted with one or more halogen, —N 3 , —OH, —NH 2 , or —SH, and wherein R 5 is not an amino acid; and
R c is —C 1 -C 6 alkyl, —C 3 -C 6 cycloalkyl, —C 2 -C 6 alkenyl, —C 4 -C 8 cycloalkenyl, —C 2 -C 6 alkynyl, —C 8 -C 12 cycloalkynyl, or aryl, wherein each alkyl, cycloalkyl, alkenyl, cycloalkenyl, or aryl is optionally substituted with one or more halogen, —N 3 , —OH, —NH 2 , or —SH.
5. The method of claim 4 , wherein the viral infection is norovirus infection.
6. The method of claim 4 , wherein the method comprises administering the compound before the subject exhibits signs of the infection.
7. The method of claim 4 , wherein the method comprises administering the compound prior to infection.
8. The method of claim 4 , wherein the subject is in close proximity to others who exhibit signs of the viral infection.
9. A method comprising administering to a subject at risk of a viral infection an effective amount of a compound of Formula D 3
or a pharmaceutically acceptable salt, solvate, enantiomer, diastereomer, racemate or mixture thereof, wherein:
A is:
X 1 is —CR 11 R 12 — or —OCH 2 CH 2 — wherein the oxygen atom is distal to the R IB moiety in A;
R 11 and R 12 are independently hydrogen or C 1 -C 4 alkyl, wherein the alkyl is optionally substituted with one or more halogen, —OH, —SH, or —NH 2 ;
X 2 is absent, —O—, —C(O)O—, or —OCH 2 — wherein the oxygen atom is distal to the R IB moiety in A;
each R IB independently is hydrogen, —C 1 -C 6 alkyl,
or R IB is an amino acid residue bound via the carbonyl group, wherein the alkyl is optionally substituted with one or more halogen, —OH, —SH, or —NH 2 ;
v is 0 or 1;
n is 0, 1, 2, or 3 and when X 2 is —C(O)O—, n is 0;
p is 2, 3, 4, 5, 6, 7, 8, 9, 10, or 11;
q is 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, or 18;
R z is hydrogen, halogen, —C 1 -C 4 alkylthio, —C 1 -C 4 alkoxy, —C 1 -C 4 alkyl, —C 2 -C 4 alkenyl, —C 2 -C 4 alkynyl, aryl, heteroaryl, —C 3 -C 8 cycloalkyl, —C 4 -C 8 cycloalkenyl, or 3- to 5-membered nonaromatic heterocycle, wherein each alkylthio, alkoxy, alkyl, alkenyl, alkynyl, aryl, heteroaryl, cycloalkyl, cycloalkenyl, or heterocycle is optionally substituted with one or more halogen, —OH, —SH, or —NH 2 ;
R a , R b , R x , and R y are each independently selected from the group consisting of hydrogen, halogen, —OH, —SH, —C 1 -C 6 alkoxy, aryloxy, —C 1 -C 6 alkylthio, arylthio, —OC(O)C 1 -C 6 alkyl, —OC(O)aryl, —C 1 -C 6 alkyl, —C 2 -C 6 alkenyl, —C 2 -C 6 alkynyl, aryl, heteroaryl, —C 3 -C 8 cycloalkyl, and —C 4 -C 8 cycloalkenyl, wherein each alkoxy, aryloxy, alkylthio, arylthio, alkyl, aryl, alkenyl, alkynyl, heteroaryl, cycloalkyl, or cycloalkenyl is optionally substituted with one or more halogen, —OH, —SH, or —NH 2 ;
or any two R a or R b , together with the atom to which they are both attached, can combine to form a C 3 -C 8 spirocycloalkyl or 3- to 8-membered spiroheterocycle;
or any two R a or R b , when on adjacent atoms, can combine to form a cis- or trans-carbon-carbon double bond or a carbon-carbon triple bond;
or any two R a or R b , when on adjacent atoms, can combine to form an aryl, heteroaryl, —C 3 -C 10 cycloalkyl, —C 4 -C 10 cycloalkenyl, or 5- to 10-membered ring heterocycle;
or any CR a R b can be replaced by —O—, —S—, —S(O)—, or —SO 2 —;
or any two R x or R y , together with the atom to which they are both attached, can combine to form a —C 3 -C 8 spirocycloalkyl or 3- to 8-membered spiroheterocycle;
or any two R x or R y , when on adjacent atoms, can combine to form a cis- or trans-carbon-carbon double bond or a carbon-carbon triple bond;
or any two R x or R y , when on adjacent atoms, can combine to form an aryl, heteroaryl, —C 3 -C 10 cycloalkyl, —C 4 -C 10 cycloalkenyl, or 5- to 10-membered ring heterocycle;
or any CR x R y can be replaced by —O—, —S—, —S(O)—, or —SO 2 —;
R 1 and R 45 are each independently hydrogen, halogen, —N 3 , —OH, —NH 2 , —SH, —C 1 -C 6 alkyl, —C 3 -C 6 cycloalkyl, —C 2 -C 6 alkenyl, —C 4 -C 8 cycloalkenyl, —C 2 -C 6 alkynyl, —C 8 -C 12 cycloalkynyl, —C 1 -C 6 alkoxy, or —C 1 -C 6 alkylthio wherein each alkyl, cycloalkyl, alkenyl, cycloalkenyl, alkynyl, cycloalkynyl, alkoxy or alkylthio is independently substituted with one or more halogen, —N 3 , —OH, —NH 2 , or —SH;
R 2 , R 3 , R 4 and R 44 are each independently hydrogen, halogen, —N 3 , —OH, —NH 2 , —SH, —C 1 -C 6 alkyl, —C 1 -C 6 alkoxy, or —C 1 -C 6 alkylthio, wherein each alkyl, alkoxy, or alkylthio is optionally substituted with one or more halogen, —N 3 , —OH, —NH 2 , or —SH;
or R 3 and one of R 4 and R 44 , together with the atoms to which they are attached can form a carbon-carbon double bond;
R 5 is independently hydrogen, —R IB , M + , aryl, aralkyl, —C 1 -C 6 alkyl, —C 1 -C 6 heteroalkyl, cycloalkyl, non-aromatic heterocyclic ring, or heteroaryl, wherein M + is a cation and wherein each aryl, aralkyl, alkyl, heteroalkyl, cycloalkyl, heterocycle, or heteroaryl is optionally substituted with one or more halogen, —N 3 , —OH, —NH 2 , or —SH, and wherein R 5 is not an amino acid; and
R c is —C 1 -C 6 alkyl, —C 3 -C 6 cycloalkyl, —C 2 -C 6 alkenyl, —C 4 -C 8 cycloalkenyl, —C 2 -C 6 alkynyl, —C 8 -C 12 cycloalkynyl, or aryl, wherein each alkyl, cycloalkyl, alkenyl, cycloalkenyl, or aryl is optionally substituted with one or more halogen, —N 3 , —OH, —NH 2 , or —SH.
10. A method of preventing a viral infection comprising administering to a subject at risk of a viral infection an effective amount of a compound of Formula IB
or a pharmaceutically acceptable salt, solvate, enantiomer, diastereomer, racemate or mixture thereof, wherein:
A is:
X 1 is —CR 11 R 12 — or —OCH 2 CH 2 — wherein the oxygen atom is distal to the R IB moiety in A;
R 11 and R 12 are independently hydrogen or C 1 -C 4 alkyl, wherein the alkyl is optionally substituted with one or more halogen, —OH, —SH, or —NH 2 ;
X 2 is absent, —O—, —C(O)O—, or —OCH 2 — wherein the oxygen atom is distal to the R IB moiety in A;
each R IB independently is hydrogen, —C 1 -C 6 alkyl,
or R IB is an amino acid residue bound via the carbonyl group, wherein the alkyl is optionally substituted with one or more halogen, —OH, —SH, or —NH 2 ;
v is 0 or 1;
n is 0, 1, 2, or 3 and when X 2 is —C(O)O—, n is 0;
p is 2, 3, 4, 5, 6, 7, 8, 9, 10, or 11;
q is 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, or 18;
R z is hydrogen, halogen, —C 1 -C 4 alkylthio, —C 1 -C 4 alkoxy, —C 1 -C 4 alkyl, —C 2 -C 4 alkenyl, —C 2 -C 4 alkynyl, aryl, heteroaryl, —C 3 -C 8 cycloalkyl, —C 4 -C 8 cycloalkenyl, or 3- to 5-membered nonaromatic heterocycle, wherein each alkylthio, alkoxy, alkyl, alkenyl, alkynyl, aryl, heteroaryl, cycloalkyl, cycloalkenyl, or heterocycle is optionally substituted with one or more halogen, —OH, —SH, or —NH 2 ;
R a , R b , R x , and R y are each independently selected from the group consisting of hydrogen, halogen, —OH, —SH, —C 1 -C 6 alkoxy, aryloxy, —C 1 -C 6 alkylthio, arylthio, —OC(O)C 1 -C 6 alkyl, —OC(O)aryl, —C 1 -C 6 alkyl, —C 2 -C 6 alkenyl, —C 2 -C 6 alkynyl, aryl, heteroaryl, —C 3 -C 8 cycloalkyl, and —C 4 -C 8 cycloalkenyl, wherein each alkoxy, aryloxy, alkylthio, arylthio, alkyl, aryl, alkenyl, alkynyl, heteroaryl, cycloalkyl, or cycloalkenyl is optionally substituted with one or more halogen, —OH, —SH, or —NH 2 ;
or any two R a or R b , together with the atom to which they are both attached, can combine to form a C 3 -C 8 spirocycloalkyl or 3- to 8-membered spiroheterocycle;
or any two R a or R b , when on adjacent atoms, can combine to form a cis- or trans-carbon-carbon double bond or a carbon-carbon triple bond;
or any two R a or R b , when on adjacent atoms, can combine to form an aryl, heteroaryl, —C 3 -C 10 cycloalkyl, —C 4 -C 10 cycloalkenyl, or 5- to 10-membered ring heterocycle;
or any CR a R b can be replaced by —O—, —S—, —S(O)—, or —SO 2 —;
or any two R x or R y , together with the atom to which they are both attached, can combine to form a —C 3 -C 8 spirocycloalkyl or 3- to 8-membered spiroheterocycle;
or any two R x or R y , when on adjacent atoms, can combine to form a cis- or trans-carbon-carbon double bond or a carbon-carbon triple bond;
or any two R x or R y , when on adjacent atoms, can combine to form an aryl, heteroaryl, —C 3 -C 10 cycloalkyl, —C 4 -C 10 cycloalkenyl, or 5- to 10-membered ring heterocycle;
or any CR x R y can be replaced by —O—, —S—, —S(O)—, or —SO 2 —;
R 1 and R 45 are each independently hydrogen, halogen, —N 3 , —OH, —NH 2 , —SH, —C 1 -C 6 alkyl, —C 3 -C 6 cycloalkyl, —C 2 -C 6 alkenyl, —C 4 -C 8 cycloalkenyl, —C 2 -C 6 alkynyl, —C 8 -C 12 cycloalkynyl, —C 1 -C 6 alkoxy, or —C 1 -C 6 alkylthio wherein each alkyl, cycloalkyl, alkenyl, cycloalkenyl, alkynyl, cycloalkynyl, alkoxy or alkylthio is independently substituted with one or more halogen, —N 3 , —OH, —NH 2 , or —SH;
R 2 , R 3 , R 4 and R 44 are each independently hydrogen, halogen, —N 3 , —OH, —NH 2 , —SH, —C 1 -C 6 alkyl, —C 1 -C 6 alkoxy, or —C 1 -C 6 alkylthio, wherein each alkyl, alkoxy, or alkylthio is optionally substituted with one or more halogen, —N 3 , —OH, —NH 2 , or —SH;
or R 3 and one of R 4 and R 44 , together with the atoms to which they are attached can form a carbon-carbon double bond;
R 5 is independently hydrogen, —R IB , M + , aryl, aralkyl, —C 1 -C 6 alkyl, —C 1 -C 6 heteroalkyl, cycloalkyl, non-aromatic heterocyclic ring, or heteroaryl, wherein M + is a cation and wherein each aryl, aralkyl, alkyl, heteroalkyl, cycloalkyl, heterocycle, or heteroaryl is optionally substituted with one or more halogen, —N 3 , —OH, —NH 2 , or —SH, and wherein R 5 is not an amino acid; and
R c is —C 1 -C 6 alkyl, —C 3 -C 6 cycloalkyl, —C 2 -C 6 alkenyl, —C 4 -C 8 cycloalkenyl, —C 2 -C 6 alkynyl, —C 8 -C 12 cycloalkynyl, or aryl, wherein each alkyl, cycloalkyl, alkenyl, cycloalkenyl, or aryl is optionally substituted with one or more halogen, —N 3 , —OH, —NH 2 , or —SH.
11. A method of protecting a subject from a viral infection comprising administering to a subject in need thereof an effective amount of a compound of Formula IB
or a pharmaceutically acceptable salt, solvate, enantiomer, diastereomer, racemate or mixture thereof, wherein:
A is:
X 1 is —CR 11 R 12 — or —OCH 2 CH 2 — wherein the oxygen atom is distal to the R IB moiety in A;
R 11 and R 12 are independently hydrogen or C 1 -C 4 alkyl, wherein the alkyl is optionally substituted with one or more halogen, —OH, —SH, or —NH 2 ;
X 2 is absent, —O—, —C(O)O—, or —OCH 2 — wherein the oxygen atom is distal to the R IB moiety in A;
each R IB independently is hydrogen, —C 1 -C 6 alkyl,
or R IB is an amino acid residue bound via the carbonyl group, wherein the alkyl is optionally substituted with one or more halogen, —OH, —SH, or —NH 2 ;
v is 0 or 1;
n is 0, 1, 2, or 3 and when X 2 is —C(O)O—, n is 0;
p is 2, 3, 4, 5, 6, 7, 8, 9, 10, or 11;
q is 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, or 18;
R z is hydrogen, halogen, —C 1 -C 4 alkylthio, —C 1 -C 4 alkoxy, —C 1 -C 4 alkyl, —C 2 -C 4 alkenyl, —C 2 -C 4 alkynyl, aryl, heteroaryl, —C 3 -C 8 cycloalkyl, —C 4 -C 8 cycloalkenyl, or 3- to 5-membered nonaromatic heterocycle, wherein each alkylthio, alkoxy, alkyl, alkenyl, alkynyl, aryl, heteroaryl, cycloalkyl, cycloalkenyl, or heterocycle is optionally substituted with one or more halogen, —OH, —SH, or —NH 2 ;
R a , R b , R x , and R y are each independently selected from the group consisting of hydrogen, halogen, —OH, —SH, —C 1 -C 6 alkoxy, aryloxy, —C 1 -C 6 alkylthio, arylthio, —OC(O)C 1 -C 6 alkyl, —OC(O)aryl, —C 1 -C 6 alkyl, —C 2 -C 6 alkenyl, —C 2 -C 6 alkynyl, aryl, heteroaryl, —C 3 -C 8 cycloalkyl, and —C 4 -C 8 cycloalkenyl, wherein each alkoxy, aryloxy, alkylthio, arylthio, alkyl, aryl, alkenyl, alkynyl, heteroaryl, cycloalkyl, or cycloalkenyl is optionally substituted with one or more halogen, —OH, —SH, or —NH 2 ;
or any two R a or R b , together with the atom to which they are both attached, can combine to form a —C 3 -C 8 spirocycloalkyl or 3- to 8-membered spiroheterocycle;
or any two R a or R b , when on adjacent atoms, can combine to form a cis- or trans-carbon-carbon double bond or a carbon-carbon triple bond;
or any two R a or R b , when on adjacent atoms, can combine to form an aryl, heteroaryl, —C 3 -C 10 cycloalkyl, —C 4 -C 10 cycloalkenyl, or 5- to 10-membered ring heterocycle;
or any CR a R b can be replaced by —O—, —S—, —S(O)—, or —SO 2 —;
or any two R x or R y , together with the atom to which they are both attached, can combine to form a —C 3 -C 8 spirocycloalkyl or 3- to 8-membered spiroheterocycle;
or any two R x or R y , when on adjacent atoms, can combine to form a cis- or trans-carbon-carbon double bond or a carbon-carbon triple bond;
or any two R x or R y , when on adjacent atoms, can combine to form an aryl, heteroaryl, —C 3 -C 10 cycloalkyl, —C 4 -C 10 cycloalkenyl, or 5- to 10-membered ring heterocycle;
or any CR x R y can be replaced by —O—, —S—, —S(O)—, or —SO 2 —;
R 1 and R 45 are each independently hydrogen, halogen, —N 3 , —OH, —NH 2 , —SH, alkyl, —C 3 -C 6 cycloalkyl, —C 2 -C 6 alkenyl, —C 4 -C 8 cycloalkenyl, —C 2 -C 6 alkynyl, —C 8 -C 12 cycloalkynyl, alkoxy, or —C 1 -C 6 alkylthio wherein each alkyl, cycloalkyl, alkenyl, cycloalkenyl, alkynyl, cycloalkynyl, alkoxy or alkylthio is independently substituted with one or more halogen, —N 3 , —OH, —NH 2 , or —SH;
R 2 , R 3 , R 4 and R 44 are each independently hydrogen, halogen, —N 3 , —OH, —NH 2 , —SH, —C 1 -C 6 alkyl, —C 1 -C 6 alkoxy, or —C 1 -C 6 alkylthio, wherein each alkyl, alkoxy, or alkylthio is optionally substituted with one or more halogen, —N 3 , —OH, —NH 2 , or —SH;
or R 3 and one of R 4 and R 44 , together with the atoms to which they are attached can form a carbon-carbon double bond;
R 5 is independently hydrogen, —R IB , M + , aryl, aralkyl, —C 1 -C 6 alkyl, —C 1 -C 6 heteroalkyl, cycloalkyl, non-aromatic heterocyclic ring, or heteroaryl, wherein M + is a cation and wherein each aryl, aralkyl, alkyl, heteroalkyl, cycloalkyl, heterocycle, or heteroaryl is optionally substituted with one or more halogen, —N 3 , —OH, —NH 2 , or —SH, and wherein R 5 is not an amino acid; and
R c is —C 1 -C 6 alkyl, —C 3 -C 6 cycloalkyl, —C 2 -C 6 alkenyl, —C 4 -C 8 cycloalkenyl, —C 2 -C 6 alkynyl, —C 8 -C 12 cycloalkynyl, or aryl, wherein each alkyl, cycloalkyl, alkenyl, cycloalkenyl, or aryl is optionally substituted with one or more halogen, —N 3 , —OH, —NH 2 , or —SH.
12. A method of reducing a viral infection comprising administering to a subject in need thereof an effective amount of a compound of Formula IB
or a pharmaceutically acceptable salt, solvate, enantiomer, diastereomer, racemate or mixture thereof, wherein:
A is:
X 1 is —CR 11 R 12 — or —OCH 2 CH 2 — wherein the oxygen atom is distal to the R IB moiety in A;
R 11 and R 12 are independently hydrogen or C 1 -C 4 alkyl, wherein the alkyl is optionally substituted with one or more halogen, —OH, —SH, or —NH 2 ;
X 2 is absent, —O—, —C(O)O—, or —OCH 2 — wherein the oxygen atom is distal to the R IB moiety in A;
each R IB independently is hydrogen, —C 1 -C 6 alkyl,
or R IB is an amino acid residue bound via the carbonyl group, wherein the alkyl is optionally substituted with one or more halogen, —OH, —SH, or —NH 2 ;
v is 0 or 1;
n is 0, 1, 2, or 3 and when X 2 is —C(O)O—, n is 0;
p is 2, 3, 4, 5, 6, 7, 8, 9, 10, or 11;
q is 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, or 18;
R z is hydrogen, halogen, —C 1 -C 4 alkylthio, —C 1 -C 4 alkoxy, —C 1 -C 4 alkyl, —C 2 -C 4 alkenyl, —C 2 -C 4 alkynyl, aryl, heteroaryl, —C 3 -C 8 cycloalkyl, —C 4 -C 8 cycloalkenyl, or 3- to 5-membered nonaromatic heterocycle, wherein each alkylthio, alkoxy, alkyl, alkenyl, alkynyl, aryl, heteroaryl, cycloalkyl, cycloalkenyl, or heterocycle is optionally substituted with one or more halogen, —OH, —SH, or —NH 2 ;
R a , R b , R x , and R y are each independently selected from the group consisting of hydrogen, halogen, —OH, —SH, —C 1 -C 6 alkoxy, aryloxy, —C 1 -C 6 alkylthio, arylthio, —OC(O)C 1 -C 6 alkyl, —OC(O)aryl, —C 1 -C 6 alkyl, —C 2 -C 6 alkenyl, —C 2 -C 6 alkynyl, aryl, heteroaryl, —C 3 -C 8 cycloalkyl, and —C 4 -C 8 cycloalkenyl, wherein each alkoxy, aryloxy, alkylthio, arylthio, alkyl, aryl, alkenyl, alkynyl, heteroaryl, cycloalkyl, or cycloalkenyl is optionally substituted with one or more halogen, —OH, —SH, or —NH 2 ;
or any two R a or R b , together with the atom to which they are both attached, can combine to form a C 3 -C 8 spirocycloalkyl or 3- to 8-membered spiroheterocycle;
or any two R a or R b , when on adjacent atoms, can combine to form a cis- or trans-carbon-carbon double bond or a carbon-carbon triple bond;
or any two R a or R b , when on adjacent atoms, can combine to form an aryl, heteroaryl, —C 3 -C 10 cycloalkyl, —C 4 -C 10 cycloalkenyl, or 5- to 10-membered ring heterocycle;
or any CR a R b can be replaced by —O—, —S—, —S(O)—, or —SO 2 —;
or any two R x or R y , together with the atom to which they are both attached, can combine to form a —C 3 -C 8 spirocycloalkyl or 3- to 8-membered spiroheterocycle;
or any two R x or R y , when on adjacent atoms, can combine to form a cis- or trans-carbon-carbon double bond or a carbon-carbon triple bond;
or any two R x or R y , when on adjacent atoms, can combine to form an aryl, heteroaryl, —C 3 -C 10 cycloalkyl, —C 4 -C 10 cycloalkenyl, or 5- to 10-membered ring heterocycle;
or any CR x R y can be replaced by —O—, —S—, —S(O)—, or —SO 2 —;
R 1 and R 45 are each independently hydrogen, halogen, —N 3 , —OH, —NH 2 , —SH, —C 1 -C 6 alkyl, —C 3 -C 6 cycloalkyl, —C 2 -C 6 alkenyl, —C 4 -C 8 cycloalkenyl, —C 2 -C 6 alkynyl, —C 8 -C 12 cycloalkynyl, —C 1 -C 6 alkoxy, or —C 1 -C 6 alkylthio wherein each alkyl, cycloalkyl, alkenyl, cycloalkenyl, alkynyl, cycloalkynyl, alkoxy or alkylthio is independently substituted with one or more halogen, —N 3 , —OH, —NH 2 , or —SH;
R 2 , R 3 , R 4 and R 44 are each independently hydrogen, halogen, —N 3 , —OH, —NH 2 , —SH, —C 1 -C 6 alkyl, —C 1 -C 6 alkoxy, or —C 1 -C 6 alkylthio, wherein each alkyl, alkoxy, or alkylthio is optionally substituted with one or more halogen, —N 3 , —OH, —NH 2 , or —SH;
or R 3 and one of R 4 and R 44 , together with the atoms to which they are attached can form a carbon-carbon double bond;
R 5 is independently hydrogen, —R IB , M + , aryl, aralkyl, —C 1 -C 6 alkyl, —C 1 -C 6 heteroalkyl, cycloalkyl, non-aromatic heterocyclic ring, or heteroaryl, wherein M + is a cation and wherein each aryl, aralkyl, alkyl, heteroalkyl, cycloalkyl, heterocycle, or heteroaryl is optionally substituted with one or more halogen, —N 3 , —OH, —NH 2 , or —SH, and wherein R 5 is not an amino acid; and
R c is —C 1 -C 6 alkyl, —C 3 -C 6 cycloalkyl, —C 2 -C 6 alkenyl, —C 4 -C 8 cycloalkenyl, —C 2 -C 6 alkynyl, —C 8 -C 12 cycloalkynyl, or aryl, wherein each alkyl, cycloalkyl, alkenyl, cycloalkenyl, or aryl is optionally substituted with one or more halogen, —N 3 , —OH, —NH 2 , or —SH.
13. A method of slowing the progression of a viral infection comprising administering to a subject in need thereof an effective amount of a compound of Formula IB
or a pharmaceutically acceptable salt, solvate, enantiomer, diastereomer, racemate or mixture thereof, wherein:
A is:
X 1 is —CR 11 R 12 — or —OCH 2 CH 2 — wherein the oxygen atom is distal to the R IB moiety in A;
R 11 and R 12 are independently hydrogen or C 1 -C 4 alkyl, wherein the alkyl is optionally substituted with one or more halogen, —OH, —SH, or —NH 2 ;
X 2 is absent, —O—, —C(O)O—, or —OCH 2 — wherein the oxygen atom is distal to the R IB moiety in A;
each R IB independently is hydrogen, —C 1 -C 6 alkyl,
or R IB is an amino acid residue bound via the carbonyl group, wherein the alkyl is optionally substituted with one or more halogen, —OH, —SH, or —NH 2 ;
v is 0 or 1;
n is 0, 1, 2, or 3 and when X 2 is —C(O)O—, n is 0;
p is 2, 3, 4, 5, 6, 7, 8, 9, 10, or 11;
q is 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, or 18;
R z is hydrogen, halogen, —C 1 -C 4 alkylthio, —C 1 -C 4 alkoxy, —C 1 -C 4 alkyl, —C 2 -C 4 alkenyl, —C 2 -C 4 alkynyl, aryl, heteroaryl, —C 3 -C 8 cycloalkyl, —C 4 -C 8 cycloalkenyl, or 3- to 5-membered nonaromatic heterocycle, wherein each alkylthio, alkoxy, alkyl, alkenyl, alkynyl, aryl, heteroaryl, cycloalkyl, cycloalkenyl, or heterocycle is optionally substituted with one or more halogen, —OH, —SH, or —NH 2 ;
R a , R b , R x , and R y are each independently selected from the group consisting of hydrogen, halogen, —OH, —SH, —C 1 -C 6 alkoxy, aryloxy, —C 1 -C 6 alkylthio, arylthio, —OC(O)C 1 -C 6 alkyl, —OC(O)aryl, —C 1 -C 6 alkyl, —C 2 -C 6 alkenyl, —C 2 -C 6 alkynyl, aryl, heteroaryl, —C 3 -C 8 cycloalkyl, and —C 4 -C 8 cycloalkenyl, wherein each alkoxy, aryloxy, alkylthio, arylthio, alkyl, aryl, alkenyl, alkynyl, heteroaryl, cycloalkyl, or cycloalkenyl is optionally substituted with one or more halogen, —OH, —SH, or —NH 2 ;
or any two R a or R b , together with the atom to which they are both attached, can combine to form a C 3 -C 8 spirocycloalkyl or 3- to 8-membered spiroheterocycle;
or any two R a or R b , when on adjacent atoms, can combine to form a cis- or trans-carbon-carbon double bond or a carbon-carbon triple bond;
or any two R a or R b , when on adjacent atoms, can combine to form an aryl, heteroaryl, —C 3 -C 10 cycloalkyl, —C 4 -C 10 cycloalkenyl, or 5- to 10-membered ring heterocycle;
or any CR a R b can be replaced by —O—, —S—, —S(O)—, or —SO 2 —;
or any two R x or R y , together with the atom to which they are both attached, can combine to form a —C 3 -C 8 spirocycloalkyl or 3- to 8-membered spiroheterocycle;
or any two R x or R y , when on adjacent atoms, can combine to form a cis- or trans-carbon-carbon double bond or a carbon-carbon triple bond;
or any two R x or R y , when on adjacent atoms, can combine to form an aryl, heteroaryl, —C 3 -C 10 cycloalkyl, —C 4 -C 10 cycloalkenyl, or 5- to 10-membered ring heterocycle;
or any CR x R y can be replaced by —O—, —S—, —S(O)—, or —SO 2 —;
R 1 and R 45 are each independently hydrogen, halogen, —N 3 , —OH, —NH 2 , —SH, —C 1 -C 6 alkyl, —C 3 -C 6 cycloalkyl, —C 2 -C 6 alkenyl, —C 4 -C 8 cycloalkenyl, —C 2 -C 6 alkynyl, —C 8 -C 11 cycloalkynyl, —C 1 -C 6 alkoxy, or —C 1 -C 6 alkylthio wherein each alkyl, cycloalkyl, alkenyl, cycloalkenyl, alkynyl, cycloalkynyl, alkoxy or alkylthio is independently substituted with one or more halogen, —N 3 , —OH, —NH 2 , or —SH;
R 2 , R 3 , R 4 and R 44 are each independently hydrogen, halogen, —N 3 , —OH, —NH 2 , —SH, —C 1 -C 6 alkyl, —C 1 -C 6 alkoxy, or —C 1 -C 6 alkylthio, wherein each alkyl, alkoxy, or alkylthio is optionally substituted with one or more halogen, —N 3 , —OH, —NH 2 , or —SH;
or R 3 and one of R 4 and R 44 , together with the atoms to which they are attached can form a carbon-carbon double bond;
R 5 is independently hydrogen, —R IB , M + , aryl, aralkyl, —C 1 -C 6 alkyl, —C 1 -C 6 heteroalkyl, cycloalkyl, non-aromatic heterocyclic ring, or heteroaryl, wherein M + is a cation and wherein each aryl, aralkyl, alkyl, heteroalkyl, cycloalkyl, heterocycle, or heteroaryl is optionally substituted with one or more halogen, —N 3 , —OH, —NH 2 , or —SH, and wherein R 5 is not an amino acid; and
R c is —C 1 -C 6 alkyl, —C 3 -C 6 cycloalkyl, —C 2 -C 6 alkenyl, —C 4 -C 8 cycloalkenyl, —C 2 -C 6 alkynyl, cycloalkynyl, or aryl, wherein each alkyl, cycloalkyl, alkenyl, cycloalkenyl, or aryl is optionally substituted with one or more halogen, —N 3 , —OH, —NH 2 , or —SH.
14. A method of delaying the onset of a viral infection comprising administering to a subject in need thereof an effective amount of a compound of Formula IB
or a pharmaceutically acceptable salt, solvate, enantiomer, diastereomer, racemate or mixture thereof, wherein:
A is:
X 1 is —CR 11 R 12 — or —OCH 2 CH 2 — wherein the oxygen atom is distal to the R IB moiety in A;
R 11 and R 12 are independently hydrogen or C 1 -C 4 alkyl, wherein the alkyl is optionally substituted with one or more halogen, —OH, —SH, or —NH 2 ;
X 2 is absent, —O—, —C(O)O—, or —OCH 2 — wherein the oxygen atom is distal to the R IB moiety in A;
each R IB independently is hydrogen, —C 1 -C 6 alkyl,
or R IB is an amino acid residue bound via the carbonyl group, wherein the alkyl is optionally substituted with one or more halogen, —OH, —SH, or —NH 2 ;
v is 0 or 1;
n is 0, 1, 2, or 3 and when X 2 is —C(O)O—, n is 0;
p is 2, 3, 4, 5, 6, 7, 8, 9, 10, or 11;
q is 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, or 18;
R z is hydrogen, halogen, —C 1 -C 4 alkylthio, —C 1 -C 4 alkoxy, —C 1 -C 4 alkyl, —C 2 -C 4 alkenyl, —C 2 -C 4 alkynyl, aryl, heteroaryl, —C 3 -C 8 cycloalkyl, —C 4 -C 8 cycloalkenyl, or 3- to 5-membered nonaromatic heterocycle, wherein each alkylthio, alkoxy, alkyl, alkenyl, alkynyl, aryl, heteroaryl, cycloalkyl, cycloalkenyl, or heterocycle is optionally substituted with one or more halogen, —OH, —SH, or —NH 2 ;
R a , R b , R x , and R y are each independently selected from the group consisting of hydrogen, halogen, —OH, —SH, —C 1 -C 6 alkoxy, aryloxy, —C 1 -C 6 alkylthio, arylthio, —OC(O)C 1 -C 6 alkyl, —OC(O)aryl, —C 1 -C 6 alkyl, —C 2 -C 6 alkenyl, —C 2 -C 6 alkynyl, aryl, heteroaryl, —C 3 -C 8 cycloalkyl, and —C 4 -C 8 cycloalkenyl, wherein each alkoxy, aryloxy, alkylthio, arylthio, alkyl, aryl, alkenyl, alkynyl, heteroaryl, cycloalkyl, or cycloalkenyl is optionally substituted with one or more halogen, —OH, —SH, or —NH 2 ;
or any two R a or R b , together with the atom to which they are both attached, can combine to form a C 3 -C 8 spirocycloalkyl or 3- to 8-membered spiroheterocycle;
or any two R a or R b , when on adjacent atoms, can combine to form a cis- or trans-carbon-carbon double bond or a carbon-carbon triple bond;
or any two R a or R b , when on adjacent atoms, can combine to form an aryl, heteroaryl, —C 3 -C 10 cycloalkyl, —C 4 -C 10 cycloalkenyl, or 5- to 10-membered ring heterocycle;
or any CR a R b can be replaced by —O—, —S—, —S(O)—, or —SO 2 —;
or any two R x or R y , together with the atom to which they are both attached, can combine to form a —C 3 -C 8 spirocycloalkyl or 3- to 8-membered spiroheterocycle;
or any two R x or R y , when on adjacent atoms, can combine to form a cis- or trans-carbon-carbon double bond or a carbon-carbon triple bond;
or any two R x or R y , when on adjacent atoms, can combine to form an aryl, heteroaryl, —C 3 -C 10 cycloalkyl, —C 4 -C 10 cycloalkenyl, or 5- to 10-membered ring heterocycle;
or any CR x R y can be replaced by —O—, —S—, —S(O)—, or —SO 2 —;
R 1 and R 45 are each independently hydrogen, halogen, —N 3 , —OH, —NH 2 , —SH, alkyl, —C 3 -C 6 cycloalkyl, —C 2 -C 6 alkenyl, —C 4 -C 8 cycloalkenyl, —C 2 -C 6 alkynyl, —C 8 -C 12 cycloalkynyl, alkoxy, or —C 1 -C 6 alkylthio wherein each alkyl, cycloalkyl, alkenyl, cycloalkenyl, alkynyl, cycloalkynyl, alkoxy or alkylthio is independently substituted with one or more halogen, —N 3 , —OH, —NH 2 , or —SH;
R 2 , R 3 , R 4 and R 44 are each independently hydrogen, halogen, —N 3 , —OH, —NH 2 , —SH, —C 1 -C 6 alkyl, —C 1 -C 6 alkoxy, or —C 1 -C 6 alkylthio, wherein each alkyl, alkoxy, or alkylthio is optionally substituted with one or more halogen, —N 3 , —OH, —NH 2 , or —SH;
or R 3 and one of R 4 and R 44 , together with the atoms to which they are attached can form a carbon-carbon double bond;
R 5 is independently hydrogen, —R IB , M + , aryl, aralkyl, —C 1 -C 6 alkyl, —C 1 -C 6 heteroalkyl, cycloalkyl, non-aromatic heterocyclic ring, or heteroaryl, wherein M + is a cation and wherein each aryl, aralkyl, alkyl, heteroalkyl, cycloalkyl, heterocycle, or heteroaryl is optionally substituted with one or more halogen, —N 3 , —OH, —NH 2 , or —SH, and wherein R 5 is not an amino acid; and
R c is —C 1 -C 6 alkyl, —C 3 -C 6 cycloalkyl, —C 2 -C 6 alkenyl, —C 4 -C 8 cycloalkenyl, —C 2 -C 6 alkynyl, —C 8 -C 12 cycloalkynyl, or aryl, wherein each alkyl, cycloalkyl, alkenyl, cycloalkenyl, or aryl is optionally substituted with one or more halogen, —N 3 , —OH, —NH 2 , or —SH.
15. The method of any of claim 1 , 4 , 9 , 10 , 11 , 12 , 13 or 14 , wherein the compound of Formula IB is: