IP Library Granted Patent US 10,577,374
Granted Patent B2
US 10,577,374 · App. 15/698,171 · Granted Mar 3, 2020

Bruton's tyrosine kinase inhibitors

Inventors: Minna Bui (Oakland, CA); Patrick Conlon (Wakefield, MA); Julio H. Cuervo (Arlington, MA); Daniel A. Erlanson (San Francisco, CA); Junfa Fan (Foster City, CA); Bing Guan (Needham, MA); Brian T. Hopkins (Newton, MA); Tracy J. Jenkins (Belmont, MA); Gnanasambandam Kumaravel (Westford, MA); Alexey A. Lugovskoy (Woburn, MA); Doug Marcotte (Worcester, MA); Noel Powell (Westford, MA); Daniel Scott (Weston, MA); Laura Silvian (Waban, MA); Art Taveras (Southborough, MA); Deping Wang (Sharon, MA); Min Zhong (Palo Alto, CA)
Assignees: Sunesis Pharmaceuticals, Inc.; Biogen MA Inc.
C07D487/14C07D401/04C07D401/14C07D413/14C07D417/14C07D471/04C07D473/34C07D487/04A61K31/519
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Quick Facts
Patent No.
US 10,577,374
App. No.
15/698,171
Granted
Mar 3, 2020
Kind
B2
Abstract

The present invention provides compounds useful as inhibitors of Btk, compositions thereof, and methods of using the same.

Claims (198)

1. A method for treating cancer, the method comprising:

administering to a human subject an effective amount of a compound having the formula:

 or a pharmaceutically acceptable salt thereof;

wherein:

X 1 is —O—, —CR 5 R 6 — or —NR 7 —;

X 2 is ═CR 8 — or ═N—;

p is 0-5;

y is 0, 1, or 2;

z is 0, 1, or 2, wherein z is 0 or 1 when y is 2, and z is 1 or 2 when y is 0;

each R 1 is independently halogen, —NO 2 , —CN, —OR, —SR, —N(R) 2 , —C(O)R, —CO 2 R, —C(O)C(O)R, —C(O)CH 2 C(O)R, —S(O)R, —S(O) 2 R, —C(O)N(R) 2 , —SO 2 N(R) 2 , —OC(O)R, —N(R)C(O)R, —N(R)N(R) 2 , —N(R)C(═NR)N(R) 2 , —C(═NR)N(R) 2 , —C═NOR, —N(R)C(O)N(R) 2 , —N(R)SO 2 N(R) 2 , —N(R)SO 2 R, —OC(O)N(R) 2 , or an optionally substituted group selected from C 1-12 aliphatic, phenyl, a 3-7 membered saturated or partially unsaturated monocyclic carbocyclic ring, a 7-10 membered saturated or partially unsaturated bicyclic carbocyclic ring, a 3-7 membered saturated or partially unsaturated monocyclic heterocyclic ring having 1-2 heteroatoms independently selected from nitrogen, oxygen, and sulfur, a 7-10 membered saturated or partially unsaturated bicyclic heterocyclic ring having 1-3 heteroatoms independently selected from nitrogen, oxygen, and sulfur, an 8-10 membered bicyclic aryl ring, a 5-6 membered heteroaryl ring having 1-3 heteroatoms independently selected from nitrogen, oxygen, and sulfur, and an 8-10 membered bicyclic heteroaryl ring having 1-4 heteroatoms independently selected from nitrogen, oxygen, and sulfur, or

two R 1 groups on adjacent carbon atoms are taken together with their intervening atoms to form an optionally substituted ring selected from phenyl, a 3-7 membered saturated or partially unsaturated monocyclic carbocyclic ring, a 7-10 membered saturated or partially unsaturated bicyclic carbocyclic ring, a 3-7 membered saturated or partially unsaturated monocyclic heterocyclic ring having 1-2 heteroatoms independently selected from nitrogen, oxygen, and sulfur, a 7-10 membered saturated or partially unsaturated bicyclic heterocyclic ring having 1-3 heteroatoms independently selected from nitrogen, oxygen, and sulfur, an 8-10 membered bicyclic aryl ring, a 5-6 membered heteroaryl ring having 1-3 heteroatoms independently selected from nitrogen, oxygen, and sulfur, and an 8-10 membered bicyclic heteroaryl ring having 1-4 heteroatoms independently selected from nitrogen, oxygen, and sulfur,

two R 1 groups on non-adjacent carbon atoms are taken together with their intervening atoms to form an optionally substituted bridge of a bridged bicyclic group, wherein the bridge is a C 1-3 hydrocarbon chain wherein one methylene unit is optionally replaced by —NR—, —O—, —C(O)—, —OC(O)—, —C(O)O—, —S—, or —S—, or

two R 1 groups on the same carbon atom are taken together with their intervening atoms to form an optionally substituted spiro fused ring selected from a 3-7 membered saturated or partially unsaturated carbocyclic ring, and a 3-7 membered saturated or partially unsaturated monocyclic heterocyclic ring having 1-2 heteroatoms independently selected from nitrogen, oxygen, and sulfur;

each R is independently hydrogen or an optionally substituted group selected from C 1-6 aliphatic, phenyl, a 3-7 membered saturated or partially unsaturated carbocyclic ring, a 3-7 membered saturated or partially unsaturated monocyclic heterocyclic ring having 1-2 heteroatoms independently selected from nitrogen, oxygen, and sulfur, and a 5-6 membered heteroaryl ring having 1-3 heteroatoms independently selected from nitrogen, oxygen, and sulfur, or

two R groups on the same nitrogen are taken together with their intervening atoms to form an optionally substituted 3-7 membered saturated, partially unsaturated, or heteroaryl ring having 1-4 heteroatoms independently selected from nitrogen, oxygen, and sulfur;

each of R 2 , R 3 , R 5 , R 6 , and R 8 is independently R, halogen, —NO 2 , —CN, —OR, —SR, —N(R) 2 , —C(O)R, —CO 2 R, —C(O)C(O)R, —C(O)CH 2 C(O)R, —S(O)R, —S(O) 2 R, —C(O)N(R) 2 , —SO 2 N(R) 2 , —OC(O)R, —N(R)C(O)R, —N(R)N(R) 2 , —N(R)C(═NR)N(R) 2 , —C(═NR)N(R) 2 , —C═NOR, —N(R)C(O)N(R) 2 , —N(R)SO 2 N(R) 2 , —N(R)SO 2 R, or —OC(O)N(R) 2 ; or

R 3 and R 4 are optionally taken together with their intervening atoms to form an optionally substituted ring selected from pyrrole, pyrazole, imidazole, a 3-7 membered saturated or partially unsaturated monocyclic heterocyclic ring having 1-2 heteroatoms independently selected from nitrogen, oxygen, and sulfur, and a 7-10 membered saturated or partially unsaturated bicyclic heterocyclic ring having 1-3 heteroatoms independently selected from nitrogen, oxygen, and sulfur;

each of R 4 and R 7 is independently R, —CN, —C(O)R, —CO 2 R, —C(O)C(O)R, —C(O)CH 2 C(O)R, —C(O)N(R) 2 , —S(O)R, —S(O) 2 R, or —S(O) 2 N(R) 2 ;

Ring A 1 is an optionally substituted phenylene ring;

Ring A 2 is an optionally substituted ring selected from phenyl, a 3-7 membered saturated or partially unsaturated monocyclic carbocyclic ring, a 7-10 membered saturated or partially unsaturated bicyclic carbocyclic ring, a 3-7 membered saturated or partially unsaturated monocyclic heterocyclic ring having 1-2 heteroatoms independently selected from nitrogen, oxygen, and sulfur, a 7-10 membered saturated or partially unsaturated bicyclic heterocyclic ring having 1-3 heteroatoms independently selected from nitrogen, oxygen, and sulfur, an 8-10 membered bicyclic aryl ring, a 5-6 membered heteroaryl ring having 1-3 heteroatoms independently selected from nitrogen, oxygen, and sulfur, and an 8-10 membered bicyclic heteroaryl ring having 1-4 heteroatoms independently selected from nitrogen, oxygen, and sulfur;

L is a covalent bond or an optionally substituted, bivalent C 1-7 saturated or unsaturated, straight or branched, hydrocarbon chain, wherein one, two, or three methylene units of L are independently replaced by -Cy-, —CR 2 —, —NR—, —N(R)C(O)—, —C(O)N(R)—, —N(R)SO 2 —, —SO 2 N(R)—, —O—, —C(O)—, —OC(O)—, —C(O)O—, —S—, —SO—, —SO 2 —, —C(═S)—, —C(═NR)—, —N═N—, or —C(═N 2 )—, wherein at least one methylene unit of L is replaced by —N(R)—; and

each Cy is independently an optionally substituted bivalent ring selected from phenylene, a 3-7 membered saturated or partially unsaturated carbocyclylene, a 3-7 membered saturated or partially unsaturated monocyclic heterocyclylene having 1-2 heteroatoms independently selected from nitrogen, oxygen, and sulfur, and a 5-6 membered heteroarylene having 1-3 heteroatoms independently selected from nitrogen, oxygen, and sulfur.

2. The method of claim 1 , wherein the cancer is leukemia or lymphoma.

3. The method of claim 1 , wherein L is —NH—C(O)—NH—, —NH—C(O)—, —NH—, or —NHSO 2 —.

4. The method of claim 3 , wherein L is —NH—C(O)—NH—or —NH—.

5. The method of claim 1 , wherein L is:

wherein s and t are independently 0, 1, or 2, and the sum of s and t is 0-4.

6. The method of claim 1 , wherein the compound is of formula I-a-i, or I-a-ii:

7. The method of claim 1 , wherein the compound is of formula I-b-i, or I-b-ii:

8. The method of claim 1 , wherein the compound is of formula IV-a:

9. The method of claim 1 , wherein the compound is of formula IV-b:

10. The method of claim 1 , wherein Ring A 2 is optionally substituted phenyl.

11. The method of claim 10 , wherein substituents on Ring A 2 are selected from R, halogen, —CN, —CF 3 , —OH, —OR, —NH 2 , —N(R) 2 , —COOH, —SR, —S(O)R, —S(O) 2 R, —S(O)N(R) 2 , and —S(O) 2 N(R) 2 .

12. The method of claim 1 , wherein Ring A 2 is of the formula:

wherein R h is F, Cl, Br, or I.

13. The method of claim 10 , wherein the carbons on Ring A 2 that are ortho to the carbon attached to —L— are each independently substituted with R, halogen, —CN, —CF 3 , —OH, —OR, —NH 2 , —N(R) 2 , or —COOH.

14. The method of claim 10 , wherein a carbon on Ring A 2 that is ortho to the carbon attached to —L— is substituted with an optionally substituted 1-pyrrolidine moiety.

15. The method of claim 1 , wherein Ring A 2 is:

16. The method of claim 15 , wherein Ring A 2 is:

17. The method of claim 1 , wherein the compound is of formula VIII:

18. The method of claim 1 , wherein the compound is selected from

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or a pharmaceutically acceptable salt thereof.

Assignments (5)
INTELLECTUAL PROPERTY SECURITY AGREEMENT Recorded Jan 23, 2025
From: VIRACTA THERAPEUTICS, INC.
To: OXFORD FINANCE LLC, AS COLLATERAL AGENT
Reel/Frame 070000/0010 →
CHANGE OF NAME Recorded Dec 9, 2021
From: SUNESIS PHARMACEUTICALS, INC.
To: VIRACTA THERAPEUTICS, INC.
Reel/Frame 058741/0187 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Sep 11, 2017
From: BUI, MINNA; ERLANSON, DANIEL A.; FAN, JUNFA; ZHONG, MIN
To: SUNESIS PHARMACEUTICALS, INC.
Reel/Frame 043547/0365 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Sep 11, 2017
From: CONLON, PATRICK; CUERVO, JULIO H.; GUAN, BING; HOPKINS, BRIAN T.; JENKINS, TRACY J.; KUMARAVEL, GNANASAMBANDAM; LUGOVSKOY, ALEXEY A.; MARCOTTE, DOUG; POWELL, NOEL; SCOTT, DANIEL; SILVIAN, LAURA; TAVERAS, ART; WANG, DEPING
To: BIOGEN IDEC MA INC.
Reel/Frame 043547/0489 →
CHANGE OF NAME Recorded Sep 11, 2017
From: BIOGEN IDEC MA INC.
To: BIOGEN MA INC.
Reel/Frame 043814/0428 →
Continuity (5)
Continuation 15006061 · Jan 25, 2016
Division 14316710 · Jun 26, 2014
Division 13393192
Provisional Application 61240011 · Sep 4, 2009
Related Publication 20180065974A1 · Mar 8, 2018