IP Library Granted Patent US 10,683,530
Granted Patent B2
US 10,683,530 · App. 15/705,677 · Granted Jun 16, 2020

Detection of oligosaccharides

Inventors: Brett E. Crawford (Poway, CA); Jillian R. Brown (Poway, CA); Charles A. Glass (San Diego, CA)
Assignee: BIOMARIN PHARMACEUTICAL INC.
C12Q1/527A61B5/4842A61B5/4866A61K31/702C07H3/04C07H3/06C07H5/06C07H7/033C07H11/00C07H13/04C12N9/88G01N33/66G01N2333/988G01N2400/40G01N2800/042G01N2800/52G01N2800/7071
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Quick Facts
Patent No.
US 10,683,530
App. No.
15/705,677
Granted
Jun 16, 2020
Kind
B2
Abstract

Provided herein are processes for detecting oligosaccharides in a biological sample. In specific instances, the biological sample is provided from an individual suffering from a disorder associated with abnormal glycosaminoglycan accumulation.

Claims (17)

1. A method for determining response to a therapy in an individual having an MPS I disorder, the method comprising:

(a) generating a biomarker comprising one or more saturated non-reducing end oligosaccharides, wherein the biomarker is generated by treating a population of a population of glycosaminoglycans, in or isolated from a biological sample from the individual, with at least one digesting glycosaminoglycan lyase, wherein prior to lyase treatment, the biomarker is not present in abundance in samples from individuals with the MPS I disorder relative to individuals without the MPS I disorder; and

(b) using an analytical instrument to detect the presence of and/or measure the amount of the biomarker produced and displaying or recording the presence of or the measure of the biomarker produced;

wherein the biomarker is selected from a group consisting of:

Formula I-A: IdoA-GlcNAc;

Formula I-B: IdoA-GlcNS;

Formula I-C: IdoA-GlcNS6S;

Formula XXI: [IdoA-GlcN(Ac)m-IdoA](SO 3 R) n , where m is 0-1 and n is 0-4;

Formula XXII: [IdoA-GlcN(Ac)m-GlcA](SO 3 R) n , where m is 0-1 and n is 0-3; and

Formula XXIII: [GlcA-GlcN(Ac)m-GlcA](SO 3 R) n , where m is 0-1 and n is 0-3.

2. The method of claim 1 , wherein the biomarker is of Formula I-A: IdoA-GlcNAc.

3. The method of claim 1 , wherein the biomarker is of Formula I-B: IdoA-GlcNS.

4. The method of claim 1 , wherein the biomarker is of Formula I-C: IdoA-GlcNS6S.

5. The method of claim 1 , wherein the method further comprises purifying the biomarker generated in step (a) to yield an isolated population of biomarkers.

6. The method of claim 5 , wherein the biomarker is purified using chromatography or electrophoresis.

7. The method of claim 1 , wherein the method further comprises tagging the biomarkers with a detectable label.

8. The method of claim 7 , wherein the detectable label is a mass label, a radio label, a fluorescent label, a chromophore label, or affinity label.

Assignments (3)
SECURITY INTEREST Recorded Apr 27, 2026
From: BIOMARIN PHARMACEUTICAL INC.; AMICUS THERAPEUTICS, INC.
To: CITIBANK, N.A., AS COLLATERAL AGENT
Reel/Frame 075493/0968 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Sep 15, 2017
From: CRAWFORD, BRETT E.; BROWN, JILLIAN R.; GLASS, CHARLES A.
To: ZACHARON PHARMACEUTICALS, INC.
Reel/Frame 043605/0486 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Sep 15, 2017
From: ZACHARON PHARMACEUTICALS, INC.
To: BIOMARIN PHARMACEUTICAL INC.
Reel/Frame 043605/0499 →