System and method for characterizing tissue organization using polarization sensitive optical coherence tomography
View Patent ↗A system and method for characterizing tissue organization using polarization sensitive optical coherence (PSOCT) tomography is provided. A PSOCT device is controlled, by a computing device, to obtain PSOCT A-line scans across a sample. For each of the PSOCT A-line scans, the computing device determines a frequency characteristic of any banding present in a respective PSOCT A-line retardance scan. The computing device controls display device to render a map of the frequency characteristic.
1. A system comprising:
a polarization sensitive optical coherence tomography (PSOCT) device;
a display device; and
a computing device configured to:
control the PSOCT device to obtain PSOCT A-line scans across a sample;
for each of the PSOCT A-line scans, determine a frequency characteristic of any banding present in a respective PSOCT A-line retardance scan; and
control the display device to render a map of the frequency characteristic.
2. The system of claim 1 , wherein the frequency characteristic comprises one of: a rising slope of a band in the respective PSOCT A-line retardance scan; a falling slope of the band in the respective PSOCT A-line retardance scan; an average of rising slopes of two or more bands in the respective PSOCT A-line retardance scan; an average of fallings slopes of the two or more bands in the respective PSOCT A-line retardance scan; and an average of a of the rising slopes and the falling slopes of the two or more bands in the respective PSOCT A-line retardance scan.
3. The system of claim 1 , wherein the frequency characteristic comprises a slope of one or more of bands in the respective PSOCT A-line retardance scan multiplied by a number of the bands used to determine the slope.
4. The system of claim 1 , wherein the frequency characteristic comprises one of: a dominant frequency determined from a Fourier Transform of the respective PSOCT A-line retardance scan; and a Fourier Transform coefficient of the dominant frequency of the Fourier Transform of the respective PSOCT A-line retardance scan, the Fourier Transform coefficient of the dominant frequency being a highest Fourier Transform coefficient of a plurality of Fourier Transform coefficients.
5. The system of claim 1 , wherein the frequency characteristic comprises: a dominant frequency determined from a wavelet transform of the respective PSOCT A-line retardance scan.
6. The system of claim 1 , wherein the frequency characteristic is determined as a function of depth in the sample, and the computing device is further configured to: control the display device to render the map of the frequency characteristic according to the depth.
7. The system of claim 6 wherein the computing device is further configured to identify inhomogeneities in the sample as a function of the depth.
8. The system of claim 1 , wherein the computing device is further configured to: identify bands of each of the PSOCT A-line retardance scans based on one or more of: an intensity threshold applied to corresponding PSOCT A-line intensity scans; and signal analysis techniques.
9. The system of claim 1 , wherein the computing device is further configured to:
control the PSOCT device to obtain one or more of an image and an en-face image of the sample; and
control the display device to render the map of the frequency characteristic on one or more of the image and the en-face image.
10. The system of claim 1 , wherein the computing device is further configured to: perform segmentation on an image of the sample, prior to determining the frequency characteristic of any banding present in the respective PSOCT A-line retardance scan, determine a region of the PSOCT A-line scans that includes a tissue signal.
11. A method comprising:
controlling, at a computing device, a polarization sensitive optical coherence tomography (PSOCT) device to obtain PSOCT A-line scans across a sample;
for each of the PSOCT A-line scans, determining, at the computing device, a frequency characteristic of any banding present in a respective PSOCT A-line retardance scan; and
controlling, at a computing device, a display device to render a map of the frequency characteristic.
12. The method of claim 11 , wherein the frequency characteristic comprises one of: a rising slope of a band in the respective PSOCT A-line retardance scan; a falling slope of the band in the respective PSOCT A-line retardance scan; an average of rising slopes of two or more bands in the respective PSOCT A-line retardance scan; an average of fallings slopes of the two or more bands in the respective PSOCT A-line retardance scan; and an average of a of the rising slopes and the falling slopes of the two or more bands in the respective PSOCT A-line retardance scan.
13. The method of claim 11 , wherein the frequency characteristic comprises a slope of one or more of bands in the respective PSOCT A-line retardance scan multiplied by a number of the bands used to determine the slope.
14. The method of claim 11 , wherein the frequency characteristic comprises one of: a dominant frequency determined from a Fourier Transform of the respective PSOCT A-line retardance scan; and a Fourier Transform coefficient of the dominant frequency of the Fourier Transform of the respective PSOCT A-line retardance scan, the Fourier Transform coefficient of the dominant frequency being a highest Fourier Transform coefficient of a plurality of Fourier Transform coefficients.
15. The method of claim 11 , wherein the frequency characteristic comprises: a dominant frequency determined from a wavelet transform of the respective PSOCT A-line retardance scan.
16. The method of claim 11 , wherein the frequency characteristic is determined as a function of depth in the sample, and the method further comprises: controlling, at the computing device, the display device to render the map of the frequency characteristic according to the depth.
17. The method of claim 16 , further comprising identifying, at the computing device, inhomogeneities in the sample as a function of the depth.
18. The method of claim 11 , further comprising identifying, at the computing device, bands of each of the PSOCT A-line retardance scans based on one or more of: an intensity threshold applied to corresponding PSOCT A-line intensity scans; and signal analysis techniques.
19. The method of claim 11 , further comprising:
controlling, at the computing device, the PSOCT device to obtain one or more of an image and an en-face image of the sample; and
controlling, at the computing device, the display device to render the map of the frequency characteristic on one or more of the image and the en-face image.
20. The method of claim 11 , further comprising: performing segmentation on an image of the sample, prior to determining the frequency characteristic of any banding present in the respective PSOCT A-line retardance scan, determine a region of the PSOCT A-line scans that includes a tissue signal.