Catalyst and use thereof
Use of a catalyst in a method of reducing a substrate, the method comprising contacting a substrate with a catalyst, optionally in the presence of a co-substrate, thereby to generate a reduced substrate. The catalyst is a polypeptide comprising an amino acid sequence having at least 70% identity to SEQ ID NO: 7. In some methods, the substrate concentration is at least 50 mM.
1. A method of reducing an ethylene group in an unsaturated substrate, the method comprising
contacting the substrate with a catalyst, optionally in the presence of a co-substrate, thereby to generate a reduced substrate, wherein the catalyst is a polypeptide comprising an amino acid sequence having at least 95% identity to SEQ ID NO: 7, wherein the substrate concentration is 50 mM to 1500 mM, and wherein the ethylene group in the unsaturated substrate is conjugated to an aldehyde, a ketone carbonyl, a carboxy group, an alkoxy carbonyl group, an amido group, or a nitro group.
2. The method of claim 1 , wherein the substrate concentration is at least 100 mM.
3. The method of claim 2 , wherein the substrate concentration is at least 300 mM.
4. The method of claim 1 , wherein the catalyst is a polypeptide comprising an amino acid sequence having at least 98% identity to SEQ ID NO: 7.
5. The method of claim 3 , wherein the catalyst is a polypeptide comprising or consisting of the amino acid sequence of SEQ ID NO: 7.
6. The method of claim 1 , wherein the ethylene group is α,β to an acyl, carboxy, acyloxy, acylamino nitro or nitrile group.
7. The method of claim 1 , wherein the substrate is a compound of formula (I):
wherein:
—R 1 is acyl, carboxy, acyloxy, nitro, acylamino, or nitrile;
—R 2 is hydrogen, alkyl, alkenyl, alkynyl, cycloalkyl, heterocyclyl, aryl, amino, hydroxyl, or oxy, and optionally further amido;
—R 3 is hydrogen, alkyl, alkenyl, alkynyl, cycloalkyl, heterocyclyl, aryl, amino, hydroxyl, oxy, carboxy, acyloxy, nitrile, or acylamino,
or where —R 1 is acyl, acyloxy or acylamino, and
—R 1 and —R 2 form a ring containing the acyl, acyloxy or acylamino group or
—R 1 and —R 3 form a ring containing the acyl, acyloxy or acylamino group; and
—R 4 is hydrogen, alkyl, alkenyl, alkynyl, cycloalkyl, heterocyclyl, aryl, amino, hydroxyl, oxy, carboxy, acyloxy, nitrile and acylamino,
and each alkyl, alkenyl, alkynyl, cycloalkyl, heterocyclyl, or aryl group is optionally substituted;
or —R 2 and —R 4 together form an unsubstituted or substituted ring.
8. The method of claim 1 wherein a co-substrate is a cofactor.
9. The method of claim 8 , wherein the cofactor is NADH.
10. The method of claim 1 , wherein the catalyst is provided by a kit comprising a reduction catalyst and one or more other catalysts, wherein the reduction catalyst is a polypeptide comprising an amino acid sequence having at least 95% identity to SEQ ID NO: 7.
11. The method of claim 1 , wherein the catalyst is provided by a catalyst preparation comprising a catalyst which is a polypeptide comprising an amino acid sequence having at least 95% identity to SEQ ID NO: 7, and wherein the amount of catalyst in the catalyst preparation is at least about 0.25 U of the catalyst per mg of the catalyst preparation.
12. The method of claim 1 , wherein the catalyst is encoded by a nucleic acid comprising a nucleic acid sequence having at least 95% sequence identity to the sequence of SEQ ID NO:8, wherein the nucleic acid encodes a polypeptide comprising an amino acid sequence having at least 95% identity to SEQ ID NO: 7.
13. The method of claim 1 , wherein the catalyst is provided by a vector comprising the nucleic acid defined in claim 12 .
14. The method of claim 1 , wherein the catalyst is provided by a host cell comprising the nucleic acid defined in claim 12 .
15. The method of claim 1 , wherein the catalyst is capable of reducing a caron-carbon double bond.
16. The method according to claim 10 , wherein the reduction catalyst is a polypeptide comprising an amino acid sequence having at least 98% identity to SEQ ID NO: 7.
17. The method according to claim 11 , polypeptide comprises an amino acid sequence having at least 98% identity to SEQ ID NO: 7.
18. The method according to claim 12 , wherein the nucleic acid encodes a polypeptide comprising an amino acid sequence having at least 98% identity to SEQ ID NO: 7.