IP Library Granted Patent US 10,865,393
Granted Patent B2
US 10,865,393 · App. 16/127,293 · Granted Dec 15, 2020

Engineered glucosyltransferases

Inventors: Yougen Li (Pennington, NJ); Ellen D. Semke (Newark, DE); Qiong Cheng (Wilmington, DE); Jian Ping Lai (Wallingford, PA)
Assignee: DUPONT INDUSTRIAL BIOSCIENCES USA, LLC
C12N9/1048C08B37/0009C12N9/1051C12P19/04C12P19/18C12Y204/01005C12Y204/01G16B25/00
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Quick Facts
Patent No.
US 10,865,393
App. No.
16/127,293
Granted
Dec 15, 2020
Kind
B2
Abstract

Disclosed herein are glucosyltransferases with modified amino acid sequences. Such engineered enzymes exhibit improved alpha-glucan product yields and/or lower leucrose yields, for example. Further disclosed are reactions and methods in which engineered glucosyltransferases are used to produce alpha-glucan.

Claims (41)

1. A non-native glucosyltransferase comprising at least two amino acid substitutions at positions corresponding with amino acid residues Gln-588, Phe-607, or Arg-741 of SEQ ID NO:62,

wherein the non-native glucosyltransferase synthesizes insoluble alpha-glucan comprising 1,3-linkages, and

wherein the non-native glucosyltransferase has:

(i) an insoluble alpha-glucan yield that is higher than the insoluble alpha-glucan yield of a second glucosyltransferase that only differs from the non-native glucosyltransferase at the substitution positions, and/or

(ii) a leucrose yield that is lower than the leucrose yield of the second glucosyltransferase;

wherein the non-native glucosyltransferase comprises an amino acid sequence that has at least 90% sequence identity to the amino acid sequence of residues 55-960 of SEQ ID NO:4 or the amino acid sequence of residues 54-957 of SEQ ID NO:65.

2. The non-native glucosyltransferase of claim 1 , wherein the glucosyltransferase comprises amino acid substitutions at positions corresponding with amino acid residues Gln-588, Phe-607 and Arg-741 of SEQ ID NO:62.

3. The non-native glucosyltransferase of claim 1 , wherein:

(i) the amino acid substitution at the position corresponding with amino acid residue Gln-588 is with a Leu, Ala, or Val residue;

(ii) the amino acid substitution at the position corresponding with amino acid residue Phe-607 is with a Trp, Tyr, or Asn residue; and/or

(iii) the amino acid substitution at the position corresponding with amino acid residue Arg-741 is with a Ser or Thr residue.

4. The non-native glucosyltransferase of claim 1 , wherein the glucosyltransferase further comprises at least one amino acid substitution at a position corresponding with amino acid residue Ala-510 and/or Asp-948 of SEQ ID NO:62.

5. The non-native glucosyltransferase of claim 1 , wherein the glucosyltransferase further comprises at least one amino acid substitution at a position corresponding with amino acid residue Ser-631, Ser-710, Arg-722, and/or Thr-877 of SEQ ID NO:62.

6. The non-native glucosyltransferase of claim 1 , wherein the glucosyltransferase further comprises at least one amino acid substitution at a position corresponding with amino acid residue Val-1188, Met-1253, and/or Gln-957 of SEQ ID NO:62.

7. The non-native glucosyltransferase of claim 1 , wherein the insoluble alpha-glucan comprises at least 50% alpha-1,3 linkages.

8. The non-native glucosyltransferase of claim 1 , comprising an amino acid sequence that has at least 92% sequence identity to the amino acid sequence of residues 55-960 of SEQ ID NO:4 or the amino acid sequence of residues 54-957 of SEQ ID NO:65.

9. The non-native glucosyltransferase of claim 1 , comprising an amino acid sequence that has at least 90% sequence identity to the amino acid sequence of SEQ ID NO:4 or the amino acid sequence of SEQ ID NO:65.

10. The non-native glucosyltransferase of claim 7 , wherein the insoluble alpha-glucan comprises at least 90% alpha-1,3 linkages.

11. The non-native glucosyltransferase of claim 1 , wherein the insoluble alpha-glucan yield is at least 10% higher than the insoluble alpha-glucan yield of the second glucosyltransferase.

12. A reaction composition comprising water, sucrose, and the non-native glucosyltransferase of claim 1 .

13. A method of producing insoluble alpha-glucan comprising:

contacting at least water, sucrose, and the non-native glucosyltransferase of claim 1 , whereby insoluble alpha-glucan is produced.

14. The method of claim 13 , wherein the method further comprises isolating the insoluble alpha-glucan.

15. The non-native glucosyltransferase of claim 4 , wherein:

(i) the amino acid substitution at the position corresponding with amino acid residue Ala-510 is with an Asp, Glu, Ile, or Val residue; and/or

(ii) the amino acid substitution at the position corresponding with amino acid residue Asp-948 is with a Gly, Val, or Ala residue.

16. The non-native glucosyltransferase of claim 5 , wherein:

(i) the amino acid substitution at the position corresponding with amino acid residue Ser-631 is with a Thr, Asp, Glu, or Arg residue;

(ii) the amino acid substitution at the position corresponding with amino acid residue Ser-710 is with a Gly, Ala, or Val residue;

(iii) the amino acid substitution at the position corresponding with amino acid residue Arg-722 is with a His or Lys residue; and/or

(iv) the amino acid substitution at the position corresponding with amino acid residue Thr-877 is with a Lys, His, or Arg residue.

17. The non-native glucosyltransferase of claim 6 , wherein:

(i) the amino acid substitution at the position corresponding with amino acid residue Val-1188 is with a Glu or Asp residue;

(ii) the amino acid substitution at the position corresponding with amino acid residue Met-1253 is with an Ile, Leu, Ala, or Val residue; and/or

(iii) the amino acid substitution at the position corresponding with amino acid residue Gln-957 is with a Pro residue.

18. The non-native glucosyltransferase of claim 8 , comprising an amino acid sequence that has at least 95% sequence identity to the amino acid sequence of residues 55-960 of SEQ ID NO:4 or the amino acid sequence of residues 54-957 of SEQ ID NO:65.

19. The non-native glucosyltransferase of claim 18 , comprising an amino acid sequence that has at least 97% sequence identity to the amino acid sequence of residues 55-960 of SEQ ID NO:4 or the amino acid sequence of residues 54-957 of SEQ ID NO:65.

20. The non-native glucosyltransferase of claim 9 , comprising an amino acid sequence that has at least 92% sequence identity to the amino acid sequence of SEQ ID NO:4 or the amino acid sequence of SEQ ID NO:65.

21. The non-native glucosyltransferase of claim 20 , comprising an amino acid sequence that has at least 95% sequence identity to the amino acid sequence of SEQ ID NO:4 or the amino acid sequence of SEQ ID NO:65.

22. The non-native glucosyltransferase of claim 20 , comprising an amino acid sequence that has at least 97% sequence identity to the amino acid sequence of SEQ ID NO:4 or the amino acid sequence of SEQ ID NO:65.

23. The non-native glucosyltransferase of claim 7 , wherein the insoluble alpha-glucan has a weight average degree of polymerization (DP w ) of at least 100.

Assignments (4)
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Nov 28, 2020
From: DUPONT INDUSTRIAL BIOSCIENCES USA, LLC
To: NUTRITION & BIOSCIENCES USA 4, INC.
Reel/Frame 055028/0496 →
CORRECTIVE ASSIGNMENT TO CORRECT THE ENTITY TYPE PREVIOUSLY RECORDED AT REEL: 049879 FRAME: 0043. ASSIGNOR(S) HEREBY CONFIRMS THE ASSIGNMENT. Recorded Sep 6, 2019
From: E. I. DU PONT DE NEMOURS AND COMPANY
To: DUPONT INDUSTRIAL BIOSCIENCES USA, LLC
Reel/Frame 050300/0408 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Jul 26, 2019
From: E. I. DU PONT DE NEMOURS AND COMPANY
To: DUPONT INDUSTRIAL BIOSCIENCES USA, LLC
Reel/Frame 049879/0043 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Jan 25, 2019
From: LI, YOUGEN; SEMKE, ELLEN D; CHENG, QIONG; LAI, JIAN PING
To: E. I. DU PONT DE NEMOURS AND COMPANY
Reel/Frame 048133/0615 →