Defined microbial compositions
Disclosed herein are compositions including cells of defined sets of microbial species (for example, 3, 16, 18, 19, 21, or 22 microbial species). Also disclosed are methods of using the microbial compositions that include contacting soil, plants, plant parts, or seeds with the composition. The microbial compositions are also used in methods of degrading biological materials, such as chitin-containing biological materials.
1. A method comprising contacting soil, plants, plant parts, or seeds with a composition consisting of cells of microbial species of each of Lactobacillus delbrueckii, Virgibacillus halophilus, Azotobacter vinelandii, Clostridium pasteurianum, Paenibacillus chibensis, Streptomyces griseus, Pseudomonas sp., Pseudomonas putida, Bacillus sp., Bacillus amyloliquefaciens, Oceanobacillus oncorhynchi, Paenibacillus lautus, Bacillus licheniformis, Lactobacillus vini, Paenibacillus cookii, Bacillus subtilis, Lactobacillus buchneri, Bacillus megaterium, Acetobacter pasteurianus, Clostridium beijerinckii, Lactobacillus casei/paracasei , and Bacillus flexus in a liquid medium.
2. The method of claim 1 , further comprising contacting the soil, plants, plant parts, or seeds with one or more of chitin, chitosan, glucosamine, and amino acids.
3. The method of claim 1 , further comprising contacting the soil, plants, plant parts, or seeds with one or more of HYT B, HYT C, and HYT D.
4. The method of claim 1 , further comprising contacting the soil, plants, plant parts, or seeds with a liquid fertilizer.
5. The method of claim 1 , further comprising contacting the soil, plants, plant parts, or seeds with one or more pesticides, one or more fungicides, one or more herbicides, one or more insecticides, one or more plant hormones, one or more plant elicitors, or combinations of two or more thereof.
6. The method of claim 1 , further comprising activating the microbial species in the composition prior to contacting the soil, plants, plant parts, or seeds with the composition.
7. The method of claim 1 , comprising contacting the soil with the composition to produce treated soil and cultivating seeds, seedlings, or plants in the treated soil.
8. A method comprising contacting soil, plants, plant parts, or seeds with a composition consisting of cells of microbial species with 16S rDNA sequences having at least 99% sequence identity to each of SEQ ID NOs: 3-24 in a liquid medium.
9. A method comprising contacting soil, plants, plant parts, or seeds with a composition consisting of American Type Culture Collection deposit number PTA-123288 and PTA-123289 in a liquid medium.
10. The method of claim 8 , wherein the composition consists of cells of microbes with 16S rDNA sequences of each of SEQ ID NOs: 3-24 in the liquid medium.