Adipate (ester or thioester) synthesis
The present invention relates to a method for preparing an adipate ester or thioester. The invention further relates to a method for preparing adipic acid from said ester or thioester. Further the invention provides a number of methods for preparing an intermediate for said ester or thioester. Further the invention relates to a method for preparing 6-amino caproic acid (6-ACA), a method for preparing 5-formyl valeric acid (5-FVA), and a method for preparing caprolactam. Further, the invention relates to a host cell for use in a method according to the invention.
1. A method for preparing an adipate ester or adipate thioester, comprising converting a 2,3-dehydroadipate ester or 2,3-dehydroadipate thioester into the adipate ester or thioester in the presence of a biocatalyst, wherein said biocatalyst comprises an enzyme, wherein said enzyme comprises the amino acid sequence of SEQ ID NO: 100, or an amino acid sequence that has at least 90% sequence identity to SEQ ID NO: 100, and wherein said enzyme catalyzes the conversion of 2,3-dehydroadipate ester or 2,3-dehydroadipate thioester into the adipate ester or thioester.
2. The method of claim 1 , wherein said enzyme comprises an amino acid sequence that has at least 93% sequence identity to residues 13-367 of SEQ ID NO: 100.
3. The method of claim 1 , wherein said enzyme comprises an amino acid sequence that has at least 94% sequence identity to residues 13-367 of SEQ ID NO: 100.
4. The method of claim 1 , wherein said enzyme comprises an amino acid sequence that has at least 95% sequence identity to residues 13-367 of SEQ ID NO: 100.
5. The method of claim 1 , wherein said enzyme comprises an amino acid sequence that has at least 98% sequence identity to residues 13-367 of SEQ ID NO: 100.
6. The method of claim 1 , wherein said enzyme comprises an amino acid sequence that has at least 99% sequence identity to residues 13-367 of SEQ ID NO: 100.
7. The method according to claim 1 , wherein the enzyme comprises the amino acid sequence of SEQ ID NO: 100.
8. The method according to claim 1 , wherein said biocatalyst is a host cell comprising said enzyme.
9. The method according to claim 8 , wherein said host cell is a microorganism.
10. The method according to claim 9 , wherein said microorganism is a bacterium, yeast or fungi.
11. The method according to claim 9 , wherein said microorganism is selected from the group consisting of Eschericia coli, Bacillus subtilis, Bacillus amyloliquefaciens, Corynebacterium glutamicum, Aspergillus niger, Penicillium chrysogenum, Pichia pastoris , and Saccharomyces cerevisiae.
12. The method according to claim 1 , wherein said 2,3-dehydroadipate ester or 2,3-dehydroadipate thioester is prepared by converting a 3-hydroxyadipate ester or 3-hydroxyadipate thioester to 2,3-dehydroadipate ester or 2,3-dehydroxyadipate thioester, respectively.
13. The method according to claim 12 , wherein said 3-hydroxyadipate ester or 3-hydroxyadipate thioester is biocatalytically converted in the presence of a biocatalyst comprising an enzyme capable of catalysing the dehydration of a 3-hydroxyacyl ester or 3-hydroxyacyl thioester to 2-enoyl ester or 2-enoyl thioester.
14. The method according to claim 13 , wherein said enzyme capable of catalysing the dehydration of a 3-hydroxyacyl ester or 3-hydroxyacyl thioester to 2-enoyl ester or 2-enoyl thioester is selected from the group consisting of an enoyl-CoA hydratase, a 3-hydroxybutyryl-CoA dehydratase and a long-chain-enoyl-CoA hydratase.
15. The method according to claim 12 , wherein said 3-hydroxyadipate ester or 3-hydroxyadipate thioester is prepared by converting a 3-oxoadipate ester or 3-oxoadipate thioester to said 3-hydroxyadipate ester or 3-hydroxyadipate thioester, respectively.
16. The method according to claim 15 , wherein said 3-oxoadipate ester or 3-oxoadipate thioester is biocatalytically converted in the presence of a biocatalyst comprising an enzyme capable of catalysing the reduction of a carbonyl group to an alcohol group or capable of catalysing the reduction of a 3-oxoacyl ester or 3-oxoacyl thioester to 3-hydroxyacyl ester or 3-hydroxyacyl thioester.
17. The method accordingly to claim 16 , wherein said enzyme capable of catalysing the reduction of a carbonyl group to an alcohol group or capable of catalysing the reduction of a 3-oxoacyl ester or 3-oxoacyl thioester to 3-hydroxyacyl ester or 3-hydroxyacyl thioester is selected from the group consisting of a 3-hydroxyacyl-CoA dehydrogenase, a 3-hydroxybutanoyl-CoA dehydrogenase, a 3-hydroxypimeloyl-CoA dehydrogenase and a long-chain-3-hydroxyacyl-CoA dehydrogenase.
18. The method according to claim 15 , wherein said 3-oxoadipate ester or 3-oxoadipate thioester is prepared by converting a succinate ester or succinate thioester and an acetate ester or acetate thioester to 3-oxoadipate ester or 3-oxoadipate thioester.
19. The method according to claim 18 , wherein said 3-oxoadipate ester or 3-oxoadipate thioester is biocatalytically converted in the presence of a biocatalyst comprising an enzyme capable of acetyl-group transfer.
20. The method of claim 19 , wherein said enzyme capable of acetyl-group transfer is selected from the group consisting of an acetyl-CoA:acetyl-CoA C-acetyltransferase, an acyl-CoA:acetyl-CoA C-acetyltransferase and a succinyl-CoA:acetyl-CoA C-succinyltransferase.