Patent
Provided herein are compositions and methods for improved production of steviol glycosides in a host cell. In some embodiments, the host cell is genetically modified to comprise a heterologous nucleotide sequence encoding a Pisum sativum kaurene oxidase or its variant kaurene oxidase. In some embodiments, the host cell further comprises one or more heterologous nucleotide sequence encoding further enzymes of a pathway capable of producing steviol glycosides in the host cell. The compositions and methods described herein provide an efficient route for the heterologous production of steviol glycosides, including but not limited to, rebaudioside D and rebaudioside M.
1. A genetically modified Saccharomyces cerevisiae host cell that produces one or more steviol glycosides comprising a heterologous nucleic acid encoding a kaurene oxidase comprising an amino acid sequence having at least 80% sequence identity to SEQ ID NO: 1, wherein the genetically modified host cell is capable of converting kaurene to kaurenoic acid at an efficiency of greater than 30%, and wherein the genetically modified host cell produces one or more steviol glycosides,
wherein the genetically modified Saccharomyces cerevisiae host cell further comprises one or more heterologous nucleic acids, wherein the one or more heterologous nucleic acids encode enzymes comprising a geranylgeranylpyrophosphate synthase, a copalyl diphosphate synthase, an ent-kaurene synthase, a polypeptide having steviol synthase activity, and one or more polypeptides having UDP glycosyltransferase activity.
2. The genetically modified Saccharomyces cerevisiae host cell of claim 1 , wherein the kaurene oxidase comprises the sequence of SEQ ID NO:1.
3. The genetically modified Saccharomyces cerevisiae host cell of claim 1 , wherein the kaurene oxidase is capable of oxidation of the C19 position of kaurene, kaurenol, and/or kaurenal.
4. The genetically modified Saccharomyces cerevisiae host cell of claim 1 , wherein the kaurene oxidase is encoded by a heterologous nucleic acid, wherein the heterologous nucleic acid comprises a nucleotide sequence having at least 80% sequence identity to SEQ ID NO:15.
5. The genetically modified Saccharomyces cerevisiae host cell of claim 1 , wherein the kaurene oxidase is encoded by a heterologous nucleic acid having the sequence of SEQ ID NO:15.
6. The genetically modified Saccharomyces cerevisiae host cell of claim 1 , wherein the kaurene oxidase comprises an amino acid sequence having at least 95% sequence identity to SEQ ID NO:1.
7. The genetically modified Saccharomyces cerevisiae host cell of claim 1 that is capable of converting kaurene to kaurenoic acid at an efficiency of greater than 55%.
8. The genetically modified Saccharomyces cerevisiae host cell of claim 1 produces kaurenoic acid, steviol, RebD, and/or RebM.
9. The genetically modified Saccharomyces cerevisiae host cell of claim 1 , wherein the one or more heterologous nucleic acids further encode a cytochrome P450 reductase, and wherein the polypeptide having steviol synthase activity is a kaurenoic acid hydroxylase.
10. A method for producing RebD comprising:
(a) culturing a population of the genetically modified host cells of claim 1 in a medium with a carbon source under conditions suitable for making RebD; and
(b) recovering said RebD from the medium.
11. A method for producing RebM comprising:
(a) culturing a population of the genetically modified host cells of claim 1 in a medium with a carbon source under conditions suitable for making RebM; and
(b) recovering said RebM from the medium.
12. A fermentation composition comprising:
(a) a genetically modified host cell comprising
a heterologous nucleic acid encoding a kaurene oxidase having at least 80% sequence identity to SEQ ID NO:1 and capable of converting kaurene to kaurenoic acid at an efficiency of greater than 30%, wherein the genetically modified host cell further comprises one or more heterologous nucleic acids, wherein the one or more heterologous nucleic acids encode enzymes comprising a geranylgeranylpyrophosphate synthase, a copalyl diphosphate synthase, an ent-kaurene synthase, a polypeptide having steviol synthase activity, and one or more polypeptides having UDP glycosyltransferase activity; and
(b) steviol glycosides produced from the genetically modified host cell.
13. The fermentation composition of claim 12 , wherein the steviol glycosides comprise RebA, RebD and RebM at a ratio of RebA:RebD:RebM of at least 1:7:50.
14. A method for producing a steviol glycoside comprising culturing a population of the genetically modified host cells of claim 1 in a medium with a carbon source under conditions suitable for making a steviol glycoside.