IP Library Granted Patent US 11,040,981
Granted Patent B2
US 11,040,981 · App. 16/755,051 · Granted Jun 22, 2021

Pyrrolotriazine compounds and methods of inhibiting TAM kinases

Inventors: David Moebius (Westwood, MA); Jason J. Marineau (Franklin, MA); Yi Zhang (Belmont, MA); Claudio Edmundo Chuaqui (Arlington, MA); Goran Malojcic (Boston, MA); William Sinko (Roslindale, MA); Huiping Amy Guan (Acton, MA); Stephane Ciblat (Montreal, CA); Clint James (Laval, CA); Amandine Xolin (Montreal, CA); Sylvain Bernard (Longueuil, CA); Malay Doshi (Pointe-Claire, CA)
Assignee: Syros Pharmaceuticals, Inc.
C07D487/04A61K31/53A61P35/00C07D401/04C07D519/00
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Quick Facts
Patent No.
US 11,040,981
App. No.
16/755,051
Granted
Jun 22, 2021
Kind
B2
Abstract

Described herein are compounds, methods of making such compounds, pharmaceutical compositions, and medicaments comprising such compounds, and methods of using such compounds to treat cancer.

Claims (53)

1. A compound of structural formula II:

or a pharmaceutically acceptable salt thereof, wherein:

R 1 is pyridin-3-yl, pyridin-4-yl, pyrazol-4-yl, cyclohexyl, or 8-azabicyclo[3.2.1]oct-2-ene-3-yl, wherein R 1 is optionally substituted with up to four independently selected substituents;

R 2 is cyclohexyl substituted with hydroxy and optionally substituted with one or two additional substituents independently selected from C 1 -C 4 alkyl and fluoro, or is 4,5,6,7-tetrahydro-1H-indazolyl optionally substituted with one to three substituents independently selected from C 1 -C 4 alkyl and fluoro; and

R 3 is —C 3 -C 8 alkyl, —(C 2 -C 6 alkylene)-O—(C 1 -C 6 alkyl), C 3 -C 6 cycloalkyl, or —(C 2 -C 6 alkylene)-C 3 -C 6 cycloalkyl, wherein R 3 is optionally substituted with 1-5 substituents independently selected from deuterium, halo, and —OH.

2. The compound of claim 1 or the pharmaceutically acceptable salt thereof, wherein R 1 is optionally substituted with up to four substituents independently selected from halo, hydroxy, -CN, -(C 1 -C 4 alkyl optionally substituted with one or more substituents selected from cyano, hydroxy and halo), -C(O)NH 2 , -COOH, -(C 0 -C 3 alkylene)-C(O)-(C 1 -C 4 alkyl), -(C 0 -C 3 alkylene)-C(O)-NH-(C 1 -C 4 alkyl), -(C 0 -C 3 alkylene)-C(O)-NH-S(O) 2 -(C 1 -C 4 alkyl), -(C 0 -C 3 alkylene)-C(O)-O-(C 1 -C 4 alkyl), -(C 0 -C 3 alkylene)-COOH, -(C 0 -C 4 alkylene)-S(O) 2 -(C 1 -C 3 alkyl), -(C 1 -C 3 alkylene)-O-(C 1 -C 4 alkyl), -S(O)(═NH)-(C 1 -C 4 alkyl), -S(O) 2 -NH-(C 1 -C 4 alkyl), -(cyclopropyl)-(cyano-substituted C 1 -C 3 alkyl), -(cyclopropyl)-C(O)-NH-(C 1 -C 4 alkyl), -(C 1 -C 3 alkylene)-C(O)-heterocyclyl, -C(O)-(C 0 -C 3 alkylene)-heterocyclyl, -(cyclopropyl)-C(O)-heterocyclyl, -(C 0 -C 4 alkylene)-heterocyclyl, -(C 0 -C 3 alkylene)-C(O)-NH-heterocyclyl, -(C 0 -C 4 alkylene)-aryl, and -(C 0 -C 4 alkylene)-heteroaryl, wherein the heterocyclyl or heteroaryl portion of the R 1 substituent is optionally further substituted.

3. The compound of claim 1 or the pharmaceutically acceptable salt thereof, wherein R 1 is 1-((1-oxetan-3-ylcarbonyl)azetidin-3-yl)pyrazol-4-yl, 1-(1-(1,1-dioxothiomorpholin-4-ylcarbonyl)-1-methylethan-1-yl)pyrazol-4-yl, 1-(1-(1-trifluoromethylcyclopropylcarbonyl)azetidin-3-yl)pyrazol-4-yl, 1-(1-(2,2,2-trifluoroethan-1-yl)azetidin-3-yl)pyrazol-4-yl, 1-(1-(2,2-dimethylmorpholin-4-ylcarbonyl)-1-methylethan-1-yl)pyrazol-4-yl, 1-(1-(2,6-dimethylmorpholin-4-ylcarbonyl)-1-methylethan-1-yl)pyrazol-4-yl, 1-(1-(2-oxa-6-azaspiro[3.3]heptan-6-ylcarbonyl)-1-methylethan-1-yl)pyrazol-4-yl, 1-(1-(2-oxa-6-azaspiro[3.4]octan-6-ylcarbonyl)-1-methylethan-1-yl)pyrazol-4-yl, 1-(1-(3,3,3-trifluoropropan -1-yl)azetidin-3-yl)pyrazol-4-yl, 1-(1-(8-oxa-3-azabicyclo[3.2.1]octan-3-ylcarbonyl)-1-methylethan-1-yl)pyrazol-4-yl, 1-(1-(azetidin-l-ylcarbonyl)-1-methylethan-1-yl)pyrazol-4-yl, 1-(1-(ethan-2-ylsulfonyl)-3-(cyanomethyl)azetidin-3-yl)pyrazol-4-yl, 1-(1-(hexahydro-1H -furo[3,4-c]pyrrol-5-ylcarbonyl)-1-methylethan-1-yl)pyrazol-4-yl, 1-(1-(isopropylaminocarbonyl)cyclopropyl)pyrazol-4-yl, 1-(1-(morpholin-4-ylcarbonyl)-1-methylethan-1-yl)pyrazol-4-yl, 1-(1-(morpholin-4-ylcarbonyl)cyclopropyl)pyrazol-4-yl, 1-(1-(pyrrolidin-1-ylcarbonyl)cyclopropyl)pyrazol-4-yl, 1-(1,1-dioxotetrahydro-2H-thiopyran-4-yl)pyrazol-4-yl, 1-(1,3-dimethylpyrazol-5-yl)pyrazol-4-yl, 1-(1-acetylazetidin-3-yl)pyrazol-4-yl, 1-(1-acetylpyrrolidin-3-yl)pyrazol-4-yl, 1-(1-cyanocyclopropylmethyl)pyrazol-4-yl, 1-(1H -pyrazol-4-ylmethyl)ppyrazol-4-yl, 1-(1-hydroxy-3-chloropropan-2-yl)pyrazol-4-yl, 1-(1-hydroxylcarbonyl-1-methylethan-1-yl)pyrazol-4-yl, 1-(1-methoxycarbonylazetidin-3-yl)pyrazol -4-yl, 1-(1-methyl-2(1H)-pyridinon-5-ylmethyl)pyrazol-4-yl, 1-(1-methyl-2-oxopyrrolidin-4-ylmethyl)pyrazol-4-yl, 1-(1-methylaminocarbonyl-1-methylethan-1-yl)pyrazol-4-yl, 1-(1-methylsulfonylazetidin-3-yl)pyrazol-4-yl, 1-(1-t-butoxycarbonylpyrrolidin-3-yl)pyrazol-4-yl, 1-(2-(1,3,4-oxadiazol-2-yl)propan-2-yl)pyrazol-4-yl, 1-(2-(2-(2-hydroxypropan-2-yl)morpholin-4-ylcarbonyl)propan-2-yl)pyrazol-4-yl, 1-(2-(2,5-dioxa-8-azaspiro[3.5]nonan-8-ylcarbonyl)propan-2-yl)pyrazol-4-yl, 1-(2-(2-methyl-1,3,4-oxadiazol-5-yl)propan-2-yl)pyrazol -4-yl, 1-(2-(2-methyl-4,6-dihydro-5H-pyrrolo[3,4-d]thiazol-5-ylcarbonyl)propan-2-yl)pyrazol-4-yl, 1-(2-(2-methyl-6,7-dihydrothiazolo[4,5-c]pyridin-5-ylcarbonyl)propan-2-yl)pyrazol-4-yl, 1-(2-(3,5-dimethylpiperazin-1-ylcarbonyl)propan-2-yl)pyrazol-4-yl, 1-(2-(3-hydroxy-3-methylazetidin-1-ylcarbonyl)propan-2-yl)pyrazol-4-yl, 1-(2-(3-hydroxy-3-methylpiperidin-1-ylcarbonyl)propan-2-yl)pyrazol-4-yl, 1-(2-(3-hydroxy-3-methylpyrrolidin-1-ylcarbonyl)propan -2-yl)pyrazol-4-yl, 1-(2-(3-hydroxypyrrolidin-1-ylcarbonyl)propan-2-yl)pyrazol-4-yl, 1-(2-(4-cyano-4-methylpiperidin-1-ylcarbonyl)propan-2-yl)pyrazol-4yl, 1-(2-(4-hydroxy-4-methylpiperidin-1-ylcarbonyl)propan-2-yl)pyrazol-4-yl, 1-(2-(4-methyloxazol-2-yl)propan-2-yl)pyrazol-4-yl, 1-(2-(4-methylpiperazin-1-ylcarbonyl)propan-2-yl)pyrazol-4-yl, 1-(2-(5-(morpholin-4-yl)-1,3,4-oxadiazol-2-yl)propan-2-yl)pyrazol-4-yl, 1-(2-(5-(tetrahydrofuran-2-yl) -1,3,4-oxadiazol-2-yl)propan-2-yl)pyrazol-4-yl, 1-(2-(5-cyclopropyl-1,3,4-oxadiazol-2-yl)propan -2-yl)pyrazol-4-yl, 1-(2-(5-difluoromethyl-1,3,4-oxadiazol-2-yl)propan-2-yl)pyrazol-4-yl, 1-(2-(5-isopropyl-1,3,4-oxadiazol-2-yl)propan-2-yl)pyrazol-4-yl, 1-(2-(5-methyl-1,3,4-thiadiazol-2-yl)propan-2-yl)pyrazol-4-yl, 1-(2-(5-methyloxazol-2-yl)propan-2-yl)pyrazol-4-yl, 1-(2-(5-trifluoromethyl-1,3,4-oxadiazol-2-yl)propan-2-yl)pyrazol-4-yl, 1-(2-(methyl)-2-(morpholin-4-yl)propan-3-yl)pyrazol-4-yl, 1-(2-(methyl)-3-(morpholin-4-yl)propan-2-yl)pyrazol-4-yl, 1-(2-(pyrrolidin-1-ylcarbonyl)propan-2-yl)pyrazol-4-yl, 1-(2-cyanoethyl)pyrazol-4-yl, 1-(2-hydroxy -2-methylpropan-1-yl)pyrazol-4-yl, 1-(2-methoxyethyl)pyrazol-4-yl, 1-(2-methyl-3-hydroxypropan-2-yl)pyrazol-4-yl, 1-(2-methylpropyl)pyrazol-4-yl, 1-(2-methylsulfonylethan-1-yl)pyrazol-4-yl, 1-(2-morpholin-4-ylethyl)pyrazol-4-yl, 1-(2-oxopyrrolidin-3-yl)pyrazol-4-yl, 1-(2-oxopyrrolidin-4-ylmethyl)pyrazol-4-yl, 1-(3-methyl-1,2,4-oxadiazol-5-ylmethyl)ppyrazol-4-yl, 1-(3-methylsulfonylphenylmethyl)pyrazol-4-yl, 1-(4-methylpiperazin-1-ylcarbonylmethylppyrazol-4-yl, 1-(4-methylsulfonylphenylmethyl)pyrazol-4-yl, 1-(5-methyl -1,2,4-oxadiazol-3-ylmethylppyrazol-4-yl, 1-(5-methyl-1,3,4-oxadiazol-2-ylmethylppyrazol-4-yl, 1-(5-methylpyrazin-2-ylmethyl)pyrazol-4-yl, 1-(5-oxopyrrolidin-2-ylmethylppyrazol-4-yl, 1-(6-hydroxyhexahydrofuro[3,2-b]furan-3-yl)pyrazol-4-yl, 1-(6-methylpyrazin-2-ylmethyl)pyrazol-4-yl, 1-(ethoxycarbonylmethyl)pyrazol-4-yl, 1-(hexahydrofuro[2,3-b]furan-3-yl)pyrazol-4-yl, 1-(hydroxycarbonylmethyl)pyrazol-4-yl, 1-(isopropylaminocarbonylmethyl)pyrazol-4-yl, 1-(isopropylcarbonylmethyl)pyrazol-4-yl, 1-(methylaminocarbonylmethyl)pyrazol-4-yl, 1-(methylsulfonylaminocarbonylmethylppyrazol-4-yl, 1-(methylsulfonylmethyl)pyrazol-4-yl, 1-(morpholin-4-ylcarbonylmethyl)pyrazol-4-yl, 1-(oxetan-2-ylmethyl)pyrazol-4-yl, 1-(oxetan-3-ylmethyl)pyrazol-4-yl, 1-(pyrazin-2-ylmethyl)pyrazol-4-yl, 1-(pyridazin-4-ylmethyl)pyrazol-4-yl, 1-(pyridin-3-ylmethylppyrazol-4-yl, 1-(pyrrolidin-l-ylcarbonylmethylppyrazol-4-yl, 1-(tetrahydrofuran-2-ylmethyl)pyrazol-4-yl, 1-(tetrahydrofuran-3-yl)pyrazol-4-yl, 1-(tetrahydrofuran-3-ylaminocarbonylmethylppyrazol-4-yl, 1-(tetrahydropyran-4-yl)pyrazol-4-yl, 1-(tetrahydropyran-4-ylmethyl)pyrazol-4-yl, 1,3-dimethylpyrazol-4-yl, 1-difluoromethylpyrazol -4-yl, 1H-pyrazol-4-yl, 1-methylpyrazol-3-yl, 1-methylpyrazol-4-yl, 1-oxetan-3-ylpyrazol-4-yl, 1-t-butylpyrazol-4-yl, 2-(1,1-dioxothiomorpholin-4-yl)pyridin-4-yl, 2-(1-methylpiperidin-3-yloxy)pyridin-4-yl, 2-(1-methylpiperidin-4-yloxy)pyridin-4-yl, 2-(1-methylpyrrolidin-3-yloxy)pyridin-4-yl, 2-(2-methoxyethan-1-yloxy)pyridin-4-yl, 2-(3-oxopiperazin-l-yl)pyridin-4-yl, 2-(4-acetylpiperazin-1-yl)pyridin-4-yl, 2-(4-methylpiperazin-l-yl)pyridin-4-yl, 2-(4-methylsulfonylpiperazin-1-yl)pyridin-4-yl, 2-(morpholin-4-yl)pyridin-4-yl, 2-(oxetan-3-yloxy)pyridin-4-yl, 2-(piperidin-3-yloxy)pyridin-4-yl, 2-(piperidin-4-yloxy)pyridin-4-yl, 2-(pyrrolidin-3-yloxy)pyridin-4-yl, 2,6-dimethylpyridin-4-yl, 2-isopropoxypyridin-4-yl, 2-isopropylaminopyridin-4-yl, 2-methylaminocarbonyl-6-methylpyridin-4-yl, 2-methylaminocarbonylpyridin-4-yl, 2-methylaminopyridin-4-yl, 2-methylpyridin-4-yl, 2-morpholin-4-ylpyridin-4-yl, 2-pyrrolidin-1-ylpyridin-4-yl, 4-(1,1-dioxothiomorpholin-4-ylcarbonyl)cyclohexyl, 4-(2-oxa-6-azaspiro[3.3]heptan-6-ylcarbonyl)cyclohexyl, 4-(4,4-difluoropiperidin-1-ylcarbonyl)cyclohexyl, 4-(4-methylpiperazin-1-yl)carbonylcyclohexyl, 4-(morpholin-4-ylcarbonyl)cyclohexyl, 4-hydroxycarbonylcyclohexyl, 4-methylpyridin-3-yl, 5-(4-methylpiperazin-1-ylcarbonyl)pyridin-3-yl, 5-(morpholin-4-ylmethyl)pyridin-3-yl, 5-(pyrrolidin -1-ylcarbonyl)pyridin-3-yl, 5-(S-imino(methyl)sulfinyl)pyridin-3-yl, 5-aminocarbonylpyridin-3-yl, 5-cyanopyridin-3-yl, 5-dimethylaminocarbonylpyridin-3-yl, 5-fluoropyridin-3-yl, 5-hydroxycarbonylpyridin-3-yl, 5-methylaminocarbonylpyridin-3-yl, 5-methylaminosulfonylpyridin-3-yl, 5-methylpyridin-3-yl, 5-methylsulfonylpyridin-3-yl, 6-(1-methyl-4,5,6,7-tetrahydro-1H-pyrazolo[3,4-c]pyridin-6-yl)pyridin-4-yl, 6-(1-methylpiperazin-4-yl)pyridin-3-yl, 6-(2-(2-hydroxypropan-2yl)morpholin-4-yl)pyridin-4-yl, 6-(2,5-dioxa-8-azaspiro[3.5]nonan-8-yl)pyridin-4-yl, 6-(2-hydroxypropan-2-yl)pyridin-4-yl, 6-(2-methyl -4,5,6,7-tetrahydro-3H-imidazo[4,5-c]pyridin-5-yl)pyridin-4-yl, 6-(2-methyl-4,5,6,7-tetrahydrothiazolo[5,4-c]pyridin-5-yl)pyridin-4-yl, 6-(2-methyl-5,6-dihydro-4H-pyrrolo[3,4-d]thiazol-5-yl)pyridin-4-yl, 6-(2-oxa-6-azaspiro[3.3]heptan-6-yl)pyridin-4-yl, 6-(2-oxa-6-azaspiro[3.4]octan-6-yl)pyridin-4-yl, 6-(2-oxa-7-azaspiro[3.5]nonan-7-yl)pyridin-4-yl, 6-(2-oxo -oxazol-3-yl)pyridin-4-yl, 6-(3-methyl-3-hydroxyazetidin-1-yl)pyridin-4-yl, 6-(3-methyl-3-hydroxypyrrolidin-1-yl)pyridin-4-yl, 6-(3-oxa-7-azaspiro[3.5]nonan-7-yl)pyridin-4-yl, 6-(3-oxomorpholin-4-yl)pyridin-4-yl, 6-(4-(cyclopropylsulfonyl)piperazin-1-yl)pyridin-4-yl, 6-(4-(N-isopropyl-N-ethylaminocarbonyl)piperazin-1-yl)pyridin-4-yl, 6-(4-(oxetan-3-yl)piperazin-1-yl)pyridin-4-yl, 6-(4-(oxetan-3-ylcarbonyl)piperazin-1-yl)pyridin-4-yl, 6-(4-(oxetan-3-ylmethyl)piperazin-1-yl)pyridin-4-yl, 6-(4-(oxetan-3-yloxycarbonyl)piperazin-1-yl)pyridin-4-yl, 6-(4-methoxycarbonylpiperazin-1-yl)pyridin-4-yl, 6-(4-methyl-4-hydroxypiperidin-1-yl)pyridin -4-yl, 6-(4-methylpiperazin-1-ylcarbonyl)pyridin-3-yl, 6-(4-methylpiperazin-1-ylmethyl)pyridin -4-yl, 6-(4-trifluoromethylsulfonylpiperazin-1-yl)pyridin-4-yl, 6-(8-oxa-3-azabicyclo [3.2. ]octan- 3-yl)pyridin-4-yl, 6-(hexahydro-1H-furo[3,4-c]pyrrol-5-yl)pyridin-4-yl, 6-(isopropylamino -carbonyl)pyridin-3-yl, 6-(methylaminocarbonyl)pyridin-3-yl, 6-(morpholin-4-yl)pyridin-4-yl, 6-(morpholin- 4 -ylcarbonyl)pyridin-3-yl, 6-(morpholin-4-ylmethyl)pyridin-3-yl, 6-(oxetan-3-yl)pyridin-4-yl, 6-(piperazin-l-yl)pyridin-4-yl, 6-(pyridin-3-yloxy)pyridin-4-yl, 6-(S -imino(methyl)sulfinyl)pyridin-4-yl, 6-(S-methyl-S-iminosulfinyl)pyridin-3-yl, 6-(tetrahydro -pyran-3-ylamino)pyridin-4-yl, 6-(tetrahydropyran-4-ylamino)pyridin-4-yl, 6-fluoropyridin-4-yl, 6-methylaminosulfonylpyridin-3-yl, 6-methylpyridin-3-yl, 6-methylpyridin-4-yl, or 6-methylsulfonylpyridin-3-yl.

4. The compound of claim 1 or the pharmaceutically acceptable salt thereof, wherein R 2 is 4-hydroxycyclohexyl optionally substituted with one to three substituents selected from -CH 3 and fluoro, or is 4,5,6,7-tetrahydro-1H-indazol-5-yl.

5. The compound of claim 1 or the pharmaceutically acceptable salt thereof, wherein R 3 is isopropyl, n-butanyl, heptan-2-yl, propan-2-yl, 3-methoxypropan-2-yl, 3,3-(difluoromethoxy)propan-2-yl, 3,3-difluoropropan-2-yl, 3-cyclopropylpropan-2-yl, 4,4,4-trifluorobutan-2-yl, 4-fluorobutan-2-yl, 4,4-difluorobutan-2-yl, 2-methoxyethan-l-yl, 2-cyclopropanylethan-1-yl, or 3,3,3-trifluoropropan-1-yl.

6. The compound of claim 1 , having structural Formula IV:

or structural Formula V:

or a pharmaceutically acceptable salt thereof, wherein:

R 8 is-(C 0 -C 4 alkylene)-S(O) 2 -(C 1 -C 3 alkyl), -C(O)-NH-(C 1 -C 4 alkyl), -C 1 -C 4 alkyl optionally substituted with one or more of halo, hydroxy and cyano, -NH-(C 1 -C 4 alkyl), -O-(C 1 -C 3 alkylene)-O-(C 1 -C 4 alkyl), -O-(C 1 -C 4 alkyl), -S(O)(═NH)-(C 1 -C 4 alkyl), -S(O) 2 -NH-(C 1 -C 4 alkyl) , -(C 0 -C 3 alkylene)-C(O)-heterocyclyl, -(C 0 -C 3 alkylene)-NH-heterocyclyl, -(C 0 -C 4 alkylene)-heterocyclyl, -O-heteroaryl, or -O-heterocyclyl, wherein any heterocyclyl, or heteroaryl portion of R 8 is optionally further substituted;

R 7 is -O-C 1 -C 3 alkyl, C 1 -C 3 haloalkyl, or -O-C 1 -C 3 haloalkyl;

R 12 is hydrogen or C 1 -C 4 alkyl; and

each is R 13a and R 13b is independently selected from hydrogen and fluoro.

7. The compound of claim 6 or the pharmaceutically acceptable salt thereof, wherein R 8 is -CH 3 , -C(O)NHCH 3 , -C(O)NHCH(CH 3 ) 2 , -NHCH(CH 3 ) 2 , -NHCH 3 , -S(═O)(═NH)-CH 3 , -S(═O) 2 -CH 3 , -S(═O) 2 -NH-CH 3 , 1,1-dioxothiomorpholin-4-yl, 1-methyl -1,4,5,7-tetrahydro-6H-pyrazolo[3,4-c]pyridin-6-yl, 1-methylpiperidin-3-yloxy, 1-methylpiperidin-4-yloxy, 1-methylpyrrolidin-3-yloxy, 1-oxa-7-azospiro[3.5]nonan-7-yl, 2-(2-hydroxypropan-2-yl)morpholin-4-yl, 2,5-dioxa-8-azospiro[3.5]nonan-8-yl, 2-methoxyethan-1-yloxy, 2-methyl-4,6-dihydro-5H-pyrrolo[3,4-d]thiazol-5-yl, 2-methyl-6,7-dihydrothiazolo[5,4-c]pyridin-5(4H)-yl, 2-oxa-6-azospiro[3.3]heptan-6-yl, 2-oxa-6-azospiro[3.5]octan-6-yl, 2-oxa-7-azospiro[3.5]nonan-7-yl, 2-oxo-oxazolidin-3-yl, 3-oxomorpholin-4-yl, 3-oxopiperazin-l-yl, 4-(N-ethyl-N-isopropylaminocarbonyl)piperazin-1-yl, 4-(oxetan-3-yl)piperazin-1-yl, 4-(oxetan-3-ylmethyl)piperazin-1-yl, 4-acetylpiperazin-1-yl, 4-cyclopropylsulfonylpiperazin-1-yl, 4-methoxycarbonylpiperazin-1-yl, 4-methylpiperazin-1-yl, 4-methylpiperazin-1-ylmethyl, 4-sulfonylmethylpiperazin-1-yl, 4-trifluoromethylsulfonylpiperazin-1-yl, 8-oxa-3-azabicyclo[3.2.1]octan-3-yl, isopropyloxy, morpholin-4-carbonyl, morpholin-4-yl, morpholin-4-ylmethyl, oxetan-3-yl, oxetan-3-yloxy, piperazin-1-yl, piperidin-3-yloxy, piperidin-4-yloxy, pyridin-3-yloxy, pyrrolidin-1-yl, pyrrolidin-3-yloxy, tetrahydro-1H-furo[3,4-c]pyrrol-5-yl, tetrahydrofuran-3-ylamino, or tetrahydropyran-4-yl.

8. The compound of claim 6 or the pharmaceutically acceptable salt thereof, wherein R 8 is morpholin-4-yl, -S(═O)(═NH)-CH 3 , or -S(═O) 2 -CH 3 .

9. The compound of claim 6 or the pharmaceutically acceptable salt thereof, wherein R 7 is -OCH 3 , -CF 3 , or -OCHF 2 .

10. The compound of claim 6 or the pharmaceutically acceptable salt thereof, wherein R 12 is hydrogen or -CH 3 .

11. The compound of claim 10 , wherein each of R 12 , R 13a and R 13b is hydrogen and the compound has structural formula IVa

structural formula Va

or is a pharmaceutically acceptable salt of either of the foregoing.

12. The compound of claim 1 , having structural Formula VI:

or a pharmaceutically acceptable salt thereof, wherein:

R 7 is -O-C 1 -C 3 alkyl, C 1 -C 3 haloalkyl, or -O-C 1 -C 3 haloalkyl;

each of R 9a and R 9b are -CH 3 , or R 9a and R 9b are taken together with the carbon atom to which they are bound to form cyclopropyl;

R 9 is C 1 -C 3 alkyl, C 1 -C 3 hydroxyalkyl, -COOH, -C(O)NH-C 1 -C 4 alkyl, -CH 2 - heterocyclyl, -C(═O)-heterocyclyl or a 5-membered heteroaryl, wherein the heterocyclyl or heteroaryl portion of R 9 is optionally substituted with up to two substituents independently selected from oxo, cyclopropyl, -OH, -CN, -C 1 -C 3 alkyl, and -C 1 -C 3 hydroxyalkyl; and

R 12 is hydrogen or C 1 -C 4 alkyl; and

each of R 13a and R 13b is independently selected from hydrogen and fluoro.

13. The compound of claim 12 or the pharmaceutically acceptable salt thereof, wherein R 7 is -OCH 3 , -CF 3 , or -OCHF 2 .

14. The compound of claim 12 or the pharmaceutically acceptable salt thereof, wherein R 9 is -CH 3 , -CH 2 OH, -COOH, -C(O)NHCH 3 , -C(O)NHCH(CH 3 ) 2 , 1,1-dioxothiomorpholin-4-ylcarbonyl, 2-(2-hydroxypropan-2-yl)morpholin-4-ylcarbonyl, 2,2-dimethylmorpholin-4-ylcarbonyl, 2,5-dioxa-8-azaspiro[3.5]nonan-8-ylcarbonyl, 2,6-dimethylmorpholin-4-ylcarbonyl, 2-oxa-6-azaspiro[3.3]heptan-6-ylcarbonyl, 2-oxa-6-azaspiro[3.4]octan-6-ylcarbonyl, 3-hydroxpyrrolidin-l-ylcarbonyl, 4-cyano-4-methylpiperidin-1-ylcarbonyl, 4-hydroxy-4-methylpiperidin-1-ylcarbonyl, 4-methylpiperazin-1-ylcarbonyl, 5-cyclopropyl-1,3,4-oxadiazol-2-yl, 5-methyl-1,3,4-oxadiazol-2-yl, 8-oxa-3-azabicyclo[3.2.1]octan-3-ylcarbonyl, azetidin-1-ylcarbonyl, morpholin-4-ylcarbonyl, morpholin-4-ylmethyl, pyrrolidin-1-ylcarbonyl, or tetrahydro-1H-furo[3,4-c]pyrrol-5(3H)-ylcarbonyl.

15. The compound of claim 14 or the pharmaceutically acceptable salt thereof, wherein R 9 is morpholin-4-ylcarbonyl, 4-methylpiperazin-1-ylcarbonyl, 2-oxa-6-azaspiro [3.3]heptan-6-ylcarbonyl, 3-methyl-3-hydroxypyrrolidin-1-ylcarbonyl, 5-methyl-1,3,4-oxadiazol-2-yl, or 5-methyl-1,3,4-thiadiazol-2-yl.

16. The compound of claim 12 or the pharmaceutically acceptable salt thereof, wherein R 12 is hydrogen or -CH 3 .

17. The compound of claim 16 , wherein each of R 12 , R 13a and R 13b is hydrogen and the compound has structural formula VIa:

or the pharmaceutically acceptable salt thereof.

18. The compound of claim 1 having structural Formula VII:

or a pharmaceutically acceptable salt thereof, wherein:

R 7a is C 1 -C 4 alkyl, -O-C 1 -C 3 alkyl, C 1 -C 3 haloalkyl, or -O-C 1 -C 3 haloalkyl;

R 9 is -COOH, -C(═O)-heterocyclyl or a 5-membered heteroaryl, wherein R 9 is optionally substituted with up to two substituents independently selected from oxo, -OH and -C 1 -C 3 alkyl; and

R 12 is hydrogen, or C 1 -C 4 alkyl; and

each of R 13a and R 13b is independently selected from hydrogen and fluoro.

19. The compound of claim 18 or the pharmaceutically acceptable salt thereof, wherein R 7 a is -(CH 2 ) 3 CH 3 , -OCH 3 , -CF 3 , or -OCHF 2 .

20. The compound of claim 19 , wherein R 7a is -(CH 2 ) 3 CH 3 , -OCH 3 , or -CF 3 .

21. The compound of claim 17 or the pharmaceutically acceptable salt thereof, wherein R 9 is -COOH, morpholin-4-ylcarbonyl, 4-methylpiperazin-1-ylcarbonyl, 2-oxa-6-azaspiro[3.3]heptan-6-ylcarbonyl, 3-methyl-3-hydroxypyrrolidin-1-ylcarbonyl, 5-methyl-1,3,4-oxadiazol-2-yl, 5-methyl-1,3,4-thiadiazol-2-yl, or 1,1-dioxothiomorpholin-4-ylcarbonyl.

22. The compound of claim 21 or the pharmaceutically acceptable salt thereof, wherein R 9 is morpholin-4-ylcarbonyl.

23. The compound of claim 17 or the pharmaceutically acceptable salt thereof, wherein R 12 is hydrogen or -CH 3 .

24. The compound of claim 18 or the pharmaceutically acceptable salt thereof, wherein each of R 12 , R 13a and R 13b is hydrogen and the compound has structural formula VIIa:

25. A compound of claim 1 , wherein the compound is:

or a pharmaceutically acceptable salt of any of foregoing compounds.

26. The compound of claim 1 or the pharmaceutically acceptable salt thereof, wherein the compound demonstrates a K i against MERTK at least two times lower than its K i against FLT3.

27. A pharmaceutical composition comprising the compound of claim 1 or the pharmaceutically acceptable salt thereof and a pharmaceutically acceptable carrier.

28. A pharmaceutical composition comprising the compound of claim 25 or the pharmaceutically acceptable salt thereof and a pharmaceutically acceptable carrier.

Assignments (8)
SECURITY INTEREST Recorded Dec 5, 2024
From: SYROS PHARMACEUTICALS, INC.; TYME TECHNOLOGIES, INC.; TYME INC.
To: OXFORD FINANCE LLC, AS COLLATERAL AGENT
Reel/Frame 069516/0338 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Aug 21, 2020
From: CIBLAT, STEPHANE; JAMES, CLINT; XOLIN, AMANDINE; BERNARD, SYLVAIN; DOSHI, MALAY
To: PARAZA PHARMA, INC.
Reel/Frame 053561/0810 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Aug 21, 2020
From: GUAN, HUIPING AMY
To: WUXI APPTEC (SHANGHAI) CO., LTD.
Reel/Frame 053561/0858 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Aug 21, 2020
From: SINKO, WILLIAM
To: SCHRÖDINGER, INC.
Reel/Frame 053561/0898 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Aug 21, 2020
From: MOEBIUS, DAVID; MARINEAU, JASON J.; ZHANG, YI; AUSTGEN, KATHRYN; CHUAQUI, CLAUDIO EDMUNDO; MALOJCIC, GORAN; SAVOIE, TRACEY LODIE
To: SYROS PHARMACEUTICALS, INC.
Reel/Frame 053561/0521 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Aug 21, 2020
From: WUXI APPTEC (SHANGHAI) CO., LTD.
To: WUXI APPTEC (HONG KONG) LIMITED
Reel/Frame 053562/0011 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Aug 21, 2020
From: PARAZA PHARMA, INC.; SCHRÖDINGER, LLC; WUXI APPTEC (HONG KONG) LIMITED
To: SYROS PHARMACEUTICALS, INC.
Reel/Frame 053562/0115 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Aug 21, 2020
From: SCHRÖDINGER, INC.
To: SCHRÖDINGER, LLC
Reel/Frame 053561/0911 →
Continuity (2)
Provisional Application 62570381 · Oct 10, 2017
Related Publication 20200317676A1 · Oct 8, 2020