IP Library Granted Patent US 11,485,745
Granted Patent B2
US 11,485,745 · App. 16/944,581 · Granted Nov 1, 2022

Amido spirocyclic amide and sulfonamide derivatives

Inventors: Kenneth W. Bair (Wellesley, MA); Timm R. Baumeister (Cambridge, MA); Peter Dragovich (South San Francisco, CA); Xiongcai Liu (Beijing, CN); Snahel Patel (South San Francisco, CA); Po-Wai Yuen (Beijing, CN); Mark Zak (South San Francisco, CA); Guiling Zhao (South San Francisco, CA); Yamin Zhang (Beijing, CN); Xiaozhang Zheng (Lexington, MA)
Assignees: Valo Health, Inc.; Genentech, Inc.
C07D519/00A61K31/438A61K31/444A61K31/4545A61K31/496A61K31/497A61K31/501A61K31/506A61K31/513A61K31/519A61K31/5377A61K31/541A61K45/06C07D471/04C07D487/04C07D491/048C07D495/04
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Quick Facts
Patent No.
US 11,485,745
App. No.
16/944,581
Granted
Nov 1, 2022
Kind
B2
Abstract

Provided are amido spirocyclic amide and sulfonamide compounds, pharmaceutical compositions comprising such compounds, and methods of treatment using such compounds.

Claims (78)

1. A process of preparing a compound of Formula I:

wherein:

R is (a) an 8-, 9-, or 10-membered bicyclic heteroaryl comprising one heteroatom selected from N, S, and O, and one, two, or three additional N atoms, wherein said bicyclic heteroaryl is unsubstituted or is substituted with one or more substituents selected from the group consisting of deuterium, amino, alkylamino, dialkylamino, alkyl, halo, cyano, haloalkyl, hydroxy, hydroxyalkyl, and alkoxy, and wherein one or more N atoms of said bicyclic heteroaryl is optionally an N-oxide; or

(b) a five- or six-membered nitrogen-linked heterocycloalkyl ring fused to a phenyl or monocyclic five- or six-membered heteroaryl, wherein said phenyl or heteroaryl is unsubstituted or is substituted with one or more substituents selected from the group consisting of deuterium, amino, alkylamino, dialkylamino, alkyl, halo, cyano, haloalkyl, hydroxy, hydroxyalkyl, and alkoxy; and

R 1 is H, —(C 1-4 alkylene) 0-1 C(O)R a , —(C 1-4 alkylene) 0-1 CO 2 R a , —(C 1-4 alkylene) 0-1 S(O)R a , —(C 1-4 alkylene) 0-1 SO 2 R a , —C(O)NH(R a ), —C(O)N(R a ) 2 , or —C(O)C(O)NH(R a );

wherein each R a is independently

(1) alkyl, unsubstituted or substituted with one or more R m substituents,

wherein each R m is independently selected from the group consisting of deuterium, hydroxy, —NR b R c , alkoxy, cyano, halo, —C(O)alkyl,

—CO 2 alkyl, —CONR b R c , —S(O)alkyl, —SO 2 alkyl, —SO 2 NR b R c , aryl, heteroaryl, cycloalkyl, heterocycloalkyl, phenoxy, and —O-alkyl-OH;

wherein R b is H or alkyl;

R c is H, alkyl, alkoxyalkyl, haloalkyl, —C(O)alkyl, —CO 2 alkyl, —SO 2 alkyl, —C(O)NH 2 , or C(O)H; and

each aryl, heteroaryl, cycloalkyl, and heterocycloalkyl group within R m is unsubstituted or substituted with one or more substituents independently selected from the group consisting of alkyl, haloalkyl, hydroxy, —NR b R c , alkoxy, haloalkoxy, cyano, halo, oxo, —C(O)alkyl, —CO 2 alkyl, —C(O)-heterocycloalkyl, —CONR b R c , —S(O)alkyl, —SO 2 alkyl, —SO 2 -haloalkyl, —SO 2 NR b R c , aryl, heteroaryl, cycloalkyl, and heterocycloalkyl; or two substituents taken together form a fused heteroaryl, cycloalkyl, or heterocycloalkyl ring;

 wherein each alkyl or alkoxy is unsubstituted or substituted with phenyl, —NR b R c , heterocycloalkyl, heteroaryl, or —C(O)alkyl; and

 each aryl, heteroaryl, cycloalkyl, and heterocycloalkyl is unsubstituted or substituted with alkyl, halo, or —C(O)alkyl;

(2) phenyl, cycloalkyl, heteroaryl, or heterocycloalkyl, each unsubstituted or substituted with one or more R g substituents;

wherein each R g is independently selected from the group consisting of alkyl, haloalkyl, hydroxy, —NR b R c , alkoxy, haloalkoxy, cyano, halo, oxo, —C(O)alkyl, —CO 2 alkyl, —C(O)-heterocycloalkyl, —CONR b R c , —S(O)alkyl, —SO 2 alkyl, —SO 2 -haloalkyl, —SO 2 NR b R c , aryl, heteroaryl, cycloalkyl, and heterocycloalkyl; or two R g substituents taken together form a fused phenyl, heteroaryl, cycloalkyl, or heterocycloalkyl ring;

wherein each alkyl or alkoxy is unsubstituted or substituted with —NR b R c , heterocycloalkyl, heteroaryl, or —C(O)alkyl; and

each aryl, heteroaryl, cycloalkyl, and heterocycloalkyl is unsubstituted or substituted with alkyl, halo, —CO 2 alkyl, or —C(O)alkyl; or

(3) —NR x R y ,

wherein R x is H or alkyl; and

R y is H, alkyl, alkoxyalkyl, haloalkyl, —C(O)alkyl, —CO 2 alkyl, or —SO 2 alkyl;

R 2 and R 3 are each independently H or deuterium; and

n is 1 or 2;

or a pharmaceutically acceptable salt thereof,

wherein the process comprises a step of contacting a Compound A:

wherein X is —OH, chloro, or bromo,

with a Compound B:

in the presence of a suitable coupling reagent to give the compound of Formula (I).

2. The process of claim 1 , wherein the suitable coupling reagent is EDCI, HATU, or HOBt.

3. The process of claim 1 , comprising contacting a Compound A with a Compound B in the presence of a suitable base.

4. The process of claim 3 , wherein the suitable base is K 2 CO 3 , Cs 2 CO 3 , a trialkylamine, a sodium alkoxide, or a potassium alkoxide.

5. The process of claim 1 , comprising a step of deprotecting a Compound F:

wherein PG 1 is a suitable nitrogen protecting group,

under suitable conditions to give the Compound B.

6. The process of claim 5 , wherein PG 1 is a Boc or Cbz group.

7. The process of claim 5 , comprising a step of contacting a Compound E:

with a compound selected from the group consisting of R a C(O)Cl, R a S(O) 2 Cl, and R a CO 2 H under suitable conditions to give the Compound F.

8. The process of claim 7 , wherein Compound E is contacted with R a C(O)Cl or R a S(O) 2 Cl in the presence of a base.

9. The process of claim 7 , wherein Compound E is contacted with R a CO 2 H under peptide coupling conditions.

10. The process of claim 7 , comprising a step of deprotecting a Compound D:

wherein PG 2 is a suitable nitrogen protecting group,

under suitable conditions to give the Compound E.

11. The process of claim 10 , wherein PG 1 is a Boc or Cbz group.

12. The process of claim 1 , wherein R is an unsubstituted or substituted 8- or 9-membered heteroaryl.

13. The process of claim 1 , wherein R is a five- or six-membered nitrogen-linked heterocycloalkyl ring fused to an unsubstituted or substituted phenyl or monocyclic heteroaryl.

14. The process of claim 1 , wherein R 1 is —C(O)R a , —CO 2 R a , —S(O)R a , or —SO 2 R a .

15. The process of claim 1 , wherein R a is unsubstituted or substituted alkyl.

16. The process of claim 1 , wherein R a is phenyl, cycloalkyl, heteroaryl, or heterocycloalkyl, each unsubstituted or substituted.

17. The process of claim 1 , wherein both R 2 and R 3 are H.

18. A process of preparing a compound of Formula I:

wherein:

R is (a) an 8-, 9-, or 10-membered bicyclic heteroaryl comprising one heteroatom selected from N, S, and O, and one, two, or three additional N atoms, wherein said bicyclic heteroaryl is unsubstituted or is substituted with one or more substituents selected from the group consisting of deuterium, amino, alkylamino, dialkylamino, alkyl, halo, cyano, haloalkyl, hydroxy, hydroxyalkyl, and alkoxy, and wherein one or more N atoms of said bicyclic heteroaryl is optionally an N-oxide; or

(b) a five- or six-membered nitrogen-linked heterocycloalkyl ring fused to a phenyl or monocyclic five- or six-membered heteroaryl, wherein said phenyl or heteroaryl is unsubstituted or is substituted with one or more substituents selected from the group consisting of deuterium, amino, alkylamino, dialkylamino, alkyl, halo, cyano, haloalkyl, hydroxy, hydroxyalkyl, and alkoxy; and

R 1 is H, —(C 1-4 alkylene) 0-1 C(O)R a , —(C 1-4 alkylene) 0-1 CO 2 R a , —(C 1-4 alkylene) 0-1 S(O)R a , —(C 1-4 alkylene) 0-1 SO 2 R a , —C(O)NH(R a ), —C(O)N(R a ) 2 , or —C(O)C(O)NH(R a );

wherein each R a is independently

(1) alkyl, unsubstituted or substituted with one or more R m substituents,

wherein each R m is independently selected from the group consisting of deuterium, hydroxy, —NR b R c , alkoxy, cyano, halo, —C(O)alkyl,

—CO 2 alkyl, —CONR b R c , —S(O)alkyl, —SO 2 alkyl, —SO 2 NR b R c , aryl, heteroaryl, cycloalkyl, heterocycloalkyl, phenoxy, and —O-alkyl-OH;

wherein R b is H or alkyl;

R c is H, alkyl, alkoxyalkyl, haloalkyl, —C(O)alkyl, —CO 2 alkyl, —SO 2 alkyl, —C(O)NH 2 , or C(O)H; and

each aryl, heteroaryl, cycloalkyl, and heterocycloalkyl group within R m is unsubstituted or substituted with one or more substituents independently selected from the group consisting of alkyl, haloalkyl, hydroxy, —NR b R c , alkoxy, haloalkoxy, cyano, halo, oxo, —C(O)alkyl, —CO 2 alkyl, —C(O) -heterocycloalkyl, —CONR b R c , —S(O)alkyl, —SO 2 alkyl, —SO 2 -haloalkyl, —SO 2 NR b R c , aryl, heteroaryl, cycloalkyl, and heterocycloalkyl; or two substituents taken together form a fused heteroaryl, cycloalkyl, or heterocycloalkyl ring;

 wherein each alkyl or alkoxy is unsubstituted or substituted with phenyl, —NR b R c , heterocycloalkyl, heteroaryl, or —C(O)alkyl; and

 each aryl, heteroaryl, cycloalkyl, and heterocycloalkyl is unsubstituted or substituted with alkyl, halo, or —C(O)alkyl;

(2) phenyl, cycloalkyl, heteroaryl, or heterocycloalkyl, each unsubstituted or substituted with one or more R g substituents;

wherein each R g is independently selected from the group consisting of alkyl, haloalkyl, hydroxy, —NR b R c , alkoxy, haloalkoxy, cyano, halo, oxo, —C(O)alkyl, —CO 2 alkyl, —C(O)-heterocycloalkyl, —CONR b R c , —S(O)alkyl, —SO 2 alkyl, —SO 2 -haloalkyl, —SO 2 NR b R c , aryl, heteroaryl, cycloalkyl, and heterocycloalkyl; or two R g substituents taken together form a fused phenyl, heteroaryl, cycloalkyl, or heterocycloalkyl ring;

wherein each alkyl or alkoxy is unsubstituted or substituted with —NR b R c , heterocycloalkyl, heteroaryl, or —C(O)alkyl; and

each aryl, heteroaryl, cycloalkyl, and heterocycloalkyl is unsubstituted or substituted with alkyl, halo, —CO 2 alkyl, or —C(O)alkyl; or

(3) —NR x R y ,

wherein R x is H or alkyl; and

R y is H, alkyl, alkoxyalkyl, haloalkyl, —C(O)alkyl, —CO 2 alkyl, or —SO 2 alkyl;

R 2 and R 3 are each independently H or deuterium; and

n is 1 or 2;

or a pharmaceutically acceptable salt thereof,

wherein the process comprises a step of contacting a Compound A:

wherein X is chloro or bromo,

with a Compound B:

in the presence of a suitable base to give the compound of Formula (I).

19. The process of claim 18 , wherein the suitable base is triethylamine, K 2 CO 3 , or Cs 2 CO 3 .

Assignments (12)
RELEASE OF SECURITY INTEREST Recorded Oct 17, 2023
From: FIRST-CITIZENS BANK & TRUST COMPANY, AS AGENT
To: VALO HEALTH, INC.; VALO HEALTH, LLC
Reel/Frame 065255/0660 →
SECURITY INTEREST Recorded Jul 6, 2023
From: VALO HEALTH, LLC; VALO HEALTH, INC.
To: FIRST-CITIZENS BANK & TRUST COMPANY, AS AGENT
Reel/Frame 064207/0957 →
MERGER Recorded Sep 8, 2021
From: VALO EARLY DISCOVERY, INC.
To: VALO HEALTH, INC.
Reel/Frame 057438/0025 →
CHANGE OF NAME Recorded Sep 16, 2020
From: INTEGRAL EARLY DISCOVERY, INC.
To: VALO EARLY DISCOVERY, INC.
Reel/Frame 053787/0138 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Sep 4, 2020
From: DRAGOVICH, PETER; PATEL, SNAHEL; ZAK, MARK; ZHAO, GUILING
To: GENENTECH, INC.
Reel/Frame 053699/0726 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Sep 4, 2020
From: LIU, XIONGCAI; YUEN, PO-WAI; ZHANG, YAMIN
To: PHARMARON BEIJING, CO., LTD.
Reel/Frame 053699/0736 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Sep 4, 2020
From: PHARMARON BEIJING, CO., LTD.
To: PHARMARON, INC.
Reel/Frame 053699/0739 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Sep 4, 2020
From: PHARMARON, INC.
To: GENENTECH, INC.
Reel/Frame 053699/0764 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Sep 4, 2020
From: FORMA THERAPEUTICS, INC.
To: INTEGRAL EARLY DISCOVERY, INC.
Reel/Frame 053707/0111 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Sep 4, 2020
From: FORMA TM, LLC
To: FORMA THERAPEUTICS, INC.
Reel/Frame 053699/0699 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Sep 4, 2020
From: BAIR, KENNETH W.; BAUMEISTER, TIMM R.; ZHENG, XIAOZHANG
To: FORMA THERAPEUTICS, INC.
Reel/Frame 053699/0711 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Sep 4, 2020
From: FORMA THERAPEUTICS, INC.
To: FORMA TM, LLC
Reel/Frame 053699/0669 →
Continuity (5)
Continuation 15936086 · Mar 26, 2018
Continuation 15473110 · Mar 29, 2017
Continuation 14382210
Provisional Application 61606291 · Mar 2, 2012
Related Publication 20210171545A1 · Jun 10, 2021
Cited By (2)
US 12,336,981 US 12,649,729