IP Library Granted Patent US 11,384,341
Granted Patent B2
US 11,384,341 · App. 17/001,015 · Granted Jul 12, 2022

Omega-hydroxylase-related fusion polypeptide variants with improved properties

Inventors: Andreas Schirmer (Hayward, CA); Baolong Zhu (Emeryville, CA); Emanuela Popova (Dublin, CA)
Assignee: Genomatica, Inc.
C12N9/0006C12N9/0042C12N15/62C12N15/81C07K2319/00C12N9/18C12Y101/01C12Y301/01005C12Y301/02014
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Quick Facts
Patent No.
US 11,384,341
App. No.
17/001,015
Granted
Jul 12, 2022
Kind
B2
Abstract

The disclosure relates to omega-hydroxylase-related fusion polypeptides that result in improved omega-hydroxylated fatty acid derivative production when expressed in recombinant host cells. The disclosure further relates to microorganisms for expressing the omega-hydroxylase-related fusion polypeptides for the production of omega-hydroxylated fatty acid derivatives.

Claims (15)

1. A cytochrome P450 CYP153A reductase (CYP153A-reductase) hybrid fusion polypeptide variant comprising at least 90% sequence identity to the amino acid sequence of SEQ ID NO: 38, wherein said CYP153A-reductase hybrid fusion polypeptide variant comprises a mutation at amino acid position 159.

2. The CYP153A-reductase hybrid fusion polypeptide variant of claim 1 , wherein expression of said CYP153A-reductase hybrid fusion polypeptide variant in a recombinant host cell results in a higher titer of an omega-hydroxylated fatty acid as compared to the titer of an omega-hydroxylated fatty acid produced by expression of the CYP153A-reductase hybrid fusion polypeptide of SEQ ID NO: 38 in a corresponding host cell.

3. The CYP153A-reductase hybrid fusion polypeptide variant of claim 1 , wherein the CYP153A-reductase hybrid fusion polypeptide variant is a hybrid CYP153A-RedRhF fusion protein variant.

4. The CYP153A-reductase hybrid fusion polypeptide variant of claim 1 , wherein the mutation is V159M.

5. A recombinant host cell expressing the CYP153A-reductase hybrid fusion polypeptide variant of claim 1 .

6. The recombinant host cell of claim 5 , further expressing a thioesterase polypeptide classified in EC 3.1.2.-.

7. The recombinant host cell of claim 6 , wherein the thioesterase polypeptide is classified in EC 3.1.1.5 or EC 3.1.2.14.

8. The recombinant host cell of claim 5 , wherein the recombinant host cell produces omega-hydroxylated fatty acids with a titer that is at least 10% greater, at least 15% greater, at least 20% greater, at least 25% greater, or at least 30% greater than the titer of omega-hydroxylated fatty acids produced by a host cell expressing a corresponding CYP153A-reductase hybrid fusion polypeptide comprising SEQ ID NO: 38, when cultured in medium containing a carbon source.

9. A cell culture comprising the recombinant host cell of claim 5 .

10. A method of producing an omega-hydroxylated fatty acid, comprising:

(i) culturing the recombinant host cell of claim 5 in the presence of a carbon source; and

(ii) harvesting an omega-hydroxylated fatty acid.

11. A recombinant microorganism comprising a pathway engineered to express at least two nucleic acid sequences encoding a polypeptide comprising:

(i) a thioesterase classified in EC 3.1.2.-; and

(ii) a CYP153A-reductase hybrid fusion polypeptide variant of claim 1 .

Assignments (4)
SECURITY INTEREST Recorded Feb 10, 2026
From: GENOMATICA, INC.
To: AGAIN BIO APS
Reel/Frame 074708/0001 →
SECURITY INTEREST Recorded Dec 9, 2025
From: GENOMATICA, INC.
To: NOVO HOLDINGS A/S, AS COLLATERAL AGENT
Reel/Frame 073915/0027 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Mar 25, 2022
From: REG LIFE SCIENCES, LLC
To: GENOMATICA, INC.
Reel/Frame 059504/0013 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Mar 25, 2022
From: SCHIRMER, ANDREAS; ZHU, BAOLONG; POPOVA, EMANUELA
To: REG LIFE SCIENCES, LLC
Reel/Frame 059403/0062 →
Cited By (1)
US 12,595,495