Antibody libraries
The present invention overcomes the inadequacies inherent in the known methods for generating libraries of antibody-encoding polynucleotides by specifically designing the libraries with directed sequence and length diversity.
1. A library of synthetic polynucleotides encoding light chain variable regions, wherein the library comprises polynucleotides encoding light chain variable regions that comprise polypeptide sequences having at least about 80%, 85%, 90%, 95%, or 100% sequence identity to the light chain polypeptide sequences of SEQ ID NOs. 181 to 304, wherein the light chain variable regions are selected from the group consisting of: (a) a VK1-05 sequence varied at one or more of positions 4, 49, and 46; (b) a VK1-12 sequence varied at one or more of positions 4, 49, 46, and 66; (c) a VK1-33 sequence varied at one or more of positions 4, 49, and 66; (d) a VK1-39 sequence varied at one or more of positions 4, 49, and 46; (e) a VK2-28 sequence varied at one or more of positions 2, 4, 46, and 49; (f) a VK3-11 sequence varied at one or more of positions 2, 4, 36, and 49; (g) a VK3-15 sequence varied at one or more of positions 2, 4, 48, and 49; (h) a VK3-20 sequence varied at one or more of positions 2, 4, 48, and 49; and (i) a VK4-1 sequence varied at one or more of positions 4, 46, 49, and 66.
2. The library of claim 1 , wherein the amino acids selected for inclusion in the one or more positions are selected from the 2, 3, 4, 5, 6, 7, 8, 9, and/or 10 most frequently occurring amino acids at the corresponding position in a reference set of light chain variable domains.
3. A method of producing an antibody of interest by expressing the library of claim 1 in one or more host cells.
4. A library of vectors containing the library of claim 1 .
5. A library of host cells containing the library of vectors of claim 4 , which host cells are yeast cells.
6. A kit containing the library of claim 1 .