IP Library Granted Patent US 11,746,369
Granted Patent B2
US 11,746,369 · App. 17/239,953 · Granted Sep 5, 2023

Ketoreductase polypeptides and polynucleotides

Inventors: Jeffrey C. Moore (Westfield, NJ); Jack Liang (South San Francisco, CA); Jonathan Penfield (Truckee, CA); Jovana Nazor (Milpitas, CA); Nikki Dellas (San Carlos, CA); Vesna Mitchell (Santa Clara, CA); Da Duan (Newark, CA); Iman Farasat (Rahway, NJ); Agustina Rodriguez-Granillo (Rahway, NJ); Grant Murphy (Rahway, NJ); Nicholas Marshall (Rahway, NJ)
Assignee: Codexis, Inc.
C12P41/002C12N9/0004C12N9/0006C12N15/70C12Y101/01002C12Y120/01001
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Quick Facts
Patent No.
US 11,746,369
App. No.
17/239,953
Filed
Apr 26, 2021
Granted
Sep 5, 2023
Kind
B2
Art Unit
1652
USPC
435/190
Abstract

The present invention provides engineered ketoreductase and phosphite dehydrogenase enzymes having improved properties as compared to a naturally occurring wild-type ketoreductase and phosphite dehydrogenase enzymes, as well as polynucleotides encoding the engineered ketoreductase and phosphite dehydrogenase enzymes, host cells capable of expressing the engineered ketoreductase and phosphite dehydrogenase enzymes, and methods of using the engineered ketoreductase and phosphite dehydrogenase enzymes to synthesize a chiral catalyst used in the synthesis of antiviral compounds, such as nucleoside inhibitors. The present invention further provides methods of using the engineered enzymes to deracemize a chiral alcohol in a one-pot, multi-enzyme system.

Claims (6)

1. An engineered ketoreductase variant having at least 95% sequence identity to SEQ ID NO: 2, wherein said engineered ketoreductase variant comprises a substitution in the amino acid sequence at position 57, as compared to SEQ ID NO: 2.

2. The engineered ketoreductase variant of claim 1 having at least 95% sequence identity to SEQ ID NO:2, and further comprising at least one substitution or substitution set at one or more positions selected from positions 37, 37/211, 37/211/229, 37/229, 45, 52, 52/110/272/296, 52/272, 52/272/274/279/296, 52/272/279/296, 55/276, 56, 104/114, 104/114/229, 286, 79/83/275/276, 83, 83/275/276, 83/276, 104, 110, 114, 138/146/258/289, 211, 211/229, 228, 229, 263, 268, 272, 274, 275/276, 276, 279, and 309, wherein said positions are numbered with reference to SEQ ID NO:2.

3. The engineered ketoreductase variant of claim 1 , comprising a polypeptide sequence having at least 97% sequence identity to SEQ ID NO: 2.

4. The engineered ketoreductase variant of claim 1 , comprising a polypeptide sequence having at least 99% sequence identity to SEQ ID NO: 2.

5. The engineered ketoreductase variant of claim 1 , wherein said engineered ketoreductase comprises a polypeptide sequence selected from the even-numbered sequences set forth in SEQ ID NOS: 6, 16, 36, 96, 100-110.

6. A composition comprising at least one engineered ketoreductase variant provided in claim 1 .

Assignments (4)
SECURITY INTEREST Recorded Feb 15, 2024
From: CODEXIS, INC.
To: INNOVATUS LIFE SCIENCES LENDING FUND I, LP, AS COLLATERAL AGENT
Reel/Frame 066600/0650 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Feb 9, 2024
From: LIANG, JACK; NAZOR, JOVANA; DELLAS, NIKKI; MITCHELL, VESNA; DUAN, DA; PENFIELD, JONATHAN
To: CODEXIS, INC.
Reel/Frame 066431/0705 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Feb 9, 2024
From: MOORE, JEFFREY C.; FARASAT, IMAN; RODRIGUEZ-GRANILLO, AGUSTINA; MURPHY, GRANT; MARSHALL, NICHOLAS
To: MERCK SHARP & DOHME CORP.
Reel/Frame 066550/0501 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Feb 8, 2024
From: LIANG, JACK; NAZOR, JOVANA; PENFIELD, JONATHAN; DELLAS, NIKKI; MITCHELL, VESNA; DUAN, DA; MERCK SHARPE & DOHME CORP.
To: CODEXIS, INC.
Reel/Frame 066417/0205 →
Continuity (3)
Division 16605576
Provisional Application 62491161 · Apr 27, 2017
Related Publication 20210254119A1 · Aug 19, 2021