Loop-mediated isothermal amplification primers for Shiga toxin-producing
Primers and methods of amplifying DNA from shiga toxins stx1 and stx2 designed for use in a multiplex method and useful in detecting shiga-toxin producing E. Coli (STEC). The primers being especially designed for use in Loop-mediated Isothermal Amplification (LAMP).
1. A primer set comprising a primer having at least 80% homology to SEQ ID NO: 3; or
a primer having at least 80% homology to SEQ ID NO: 6, or a combination of the foregoing primers.
2. A primer set of claim 1 , comprising a primer having at least 80% homology to SEQ ID NO: 3 and primer having at least 80% homology to SEQ ID NO: 1.
3. The primer set of claim 1 , further comprising a primer having at least 80% homology to SEQ ID NO. 2.
4. The primer set of claim 1 , further comprising a primer having at least 80% homology to SEQ ID NO. 4.
5. The primer set of claim 1 , further comprising a primer having at least 80% homology to SEQ ID NO: 5.
6. The primer set of claim 1 , further comprising a primer at least 80% homology to SEQ ID NO: 3; and
a primer at least 80% homology to SEQ ID NO: 6.
7. A lyophilized pellet or powder comprising a primer set of claim 1 .
8. A method of amplifying target DNA comprising exposing the target DNA to a primer set of claim 1 under conditions that are suitable for amplification of the target DNA.
9. A primer set of claim 1 , further comprising a primer having at least an 80% homology to SEQ ID 9 or a primer having at least an 80% homology to SEQ ID 12, or both.
10. A primer set of claim 9 , further comprising a primer having at least an 80% homology to SEQ ID 7, a primer having at least an 80% homology to SEQ ID 10, a primer having at least an 80% homology to SEQ ID 8, a primer having at least 80% homology to SEQ ID 11, or more than one of the foregoing.
11. A primer set of claim 9 , comprising a primer having at least 80% homology to SEQ ID 9 and a primer having at least 80% homology to SEQ ID 12.
12. A primer set of claim 11 , further comprising a primer having at least 80% homology to SEQ ID 7, a primer having at least 80% homology to SEQ ID 10, or both.