Method and system for selecting a region of interest in an image
A system and computer-implemented method for analysing or monitoring a subject, the method comprising: identifying one or more objects of interest that have been segmented from a first image comprising any of a baseline scan, a follow-up scan or a reference image of the subject; identifying predefined landmarks of the objects; determining reference morphometries pertaining to the objects by performing morphometrics on the objects by reference to the landmarks; selecting one or more regions of interest (ROIs) from the objects according to the reference morphometries, comprising identifying respective locations of the ROIs relative to the reference morphometries; performing a first analysis of the one or more ROIs; performing at least one corresponding second analysis of the one or more ROIs in respectively at least one second image comprising any other of a baseline scan, a follow-up scan or a reference image; and generating a comparison of one or more results of the first analysis and one or more corresponding results of the second analysis.
1. A computer-implemented method for analysing or monitoring a subject, the method comprising:
identifying one or more objects of interest that have been segmented from a first image comprising any of a baseline scan, a follow-up scan or a reference image of the subject;
identifying predefined landmarks of the objects;
determining reference morphometries pertaining to the objects by performing morphometrics on the objects by reference to the landmarks, wherein determining the reference morphometries includes applying one or more image processing algorithms to the first image to calculate basic morphometries;
selecting one or more regions of interest (ROIs) from the objects according to the reference morphometries, comprising identifying respective locations of the ROIs relative to the reference morphometries;
performing a first analysis of the one or more ROIs;
performing at least one corresponding second analysis of the one or more ROIs in respectively at least one second image comprising any other of a baseline scan, a follow-up scan or a reference image; generating a comparison of one or more results of the first analysis and one or more corresponding results of the second analysis; and
outputting the comparison.
2. A method as claimed in claim 1 , wherein each of the first and second analyses comprise a diagnostic, clinical or microstructure analysis.
3. A method as claimed in claim 1 , comprising diagnosing or monitoring the subject including determining a density of one or more of the ROIs.
4. A method as claimed in claim 3 , comprising determining the density of the one or more of the ROIs using attenuation of a referent material.
5. A method as claimed in claim 1 , wherein the baseline scan, follow-up scan and/or reference image are derived from imaging modalities comprising one or more of CT, MR, DXA, ultrasound imaging and pathology imaging.
6. A method as claimed in claim 1 , wherein the first image is baseline scan or reference image, and the second image is a follow-up scan.
7. A method as claimed in claim 1 , comprising performing a plurality of corresponding second analyses of the one or more ROIs in a plurality of respective second images.
8. A method as claimed in claim 1 , wherein the first image is baseline scan or reference image, and the method comprises (a) performing a plurality of corresponding second analyses of the one or more ROIs in a plurality of respective second images, and (b) generating comparisons of one or more results of the first analysis and the respective one or more results of the respective second analyses.
9. A method as claimed in claim 1 , wherein performing determining the reference morphometries further includes applying one or more trained deep learning reference morphometric models to one or more of the basic morphometries to determine one or more of the reference morphometries.
10. A method as claimed in claim 1 , wherein the comparison, when output, is usable to perform a diagnostic analysis, monitor a disease, or monitor a treatment.
11. A system for analysing or monitoring a subject, the system comprising:
an object and landmark identifier configured to identify one or more objects of interest that have been segmented from a first image comprising any of a baseline scan, a follow-up scan or a reference image of the subject, and to identify predefined landmarks of the objects;
a morphometer configured to determine reference morphometries pertaining to the objects by performing morphometrics on the objects by reference to the landmarks, wherein determining the reference morphometries includes applying one or more image processing algorithms to the first image to calculate basic morphometries; and
a region selector configured to select one or more regions of interest (ROIs) from the objects according to the reference morphometries, comprising identifying respective locations of the ROIs and determining respective shapes and sizes of the ROIs relative to the reference morphometries;
wherein the system is configured to:
perform a first analysis of the one or more ROIs;
perform at least one corresponding second analysis of the one or more ROIs in respectively at least one second image comprising any other of a baseline scan, a follow-up scan or a reference image;
generate a comparison of one or more results of the first analysis and one or more corresponding results of the second analysis; and
output the comparison.
12. A system as claimed in claim 11 , wherein each of the first and second analyses comprise a diagnostic, clinical or microstructure analysis.
13. A system as claimed in claim 11 , configured to diagnose or monitor the subject including determining a density of one or more of the ROIs.
14. A system as claimed in claim 13 , configured to determine the density of the one or more of the ROIs using attenuation of a referent material.
15. A system as claimed in claim 11 , wherein the baseline scan, follow-up scan and/or reference image are derived from imaging modalities comprising one or more of CT, MR, DXA, ultrasound imaging and pathology imaging.
16. A system as claimed in claim 11 , wherein the first image is baseline scan or reference image, and the second image is a follow-up scan.
17. A system as claimed in claim 11 , wherein the first image is baseline scan or reference image, and the system is configured to (a) perform a plurality of corresponding second analyses of the one or more ROIs in a plurality of respective second images, and (b) generate comparisons of one or more results of the first analysis and the respective one or more results of the respective second analyses.
18. A system as claimed in claim 11 , wherein the comparison, when output, is usable to perform a diagnostic analysis, monitor a disease, or monitor a treatment.
19. A system as claimed in claim 11 , wherein determining the reference morphometries further includes applying one or more trained deep learning reference morphometric models to one or more of the basic morphometries to determine one or more of the reference morphometries.
20. A non-transitory computer-readable medium, comprising a computer program that comprises program code configured to, when executed by one or more processors, implement the method of analysing or monitoring a subject of claim 1 .