IP Library Granted Patent US 12,552,746
Granted Patent B2
US 12,552,746 · App. 17/787,000 · Granted Feb 17, 2026

Process and intermediates for the preparation of upadacitinib

Inventors: Yolanda Fernández Sainz (Valladolid, ES); Antonio Lorente Bonde-Larsen (Valladolid, ES); Alfonso Pérez Encabo (Valladolid, ES); José Ángel Turiel Hernandez (Valladolid, ES); José Enrique Gómez Pulido (Valladolid, ES); Mario Laderas Muñoz (Valladolid, ES)
Assignee: CURIA SPAIN, S.A.U.
C07D207/08C07D207/16C07D207/20C07D207/22C07D487/14C07F7/1804C07F7/188
View Patent ↗
Loading inventors, assignments & file history…
Monitor This Case
Get email alerts when status or documents change.
Order Certified Copies
Most orders are placed with the USPTO same day — all within 24 business hours.
Order via The Patent Place →
Pre-filled with this patent's details
Quick Facts
Patent No.
US 12,552,746
App. No.
17/787,000
Granted
Feb 17, 2026
Kind
B2
Abstract

The invention relates to a process for the preparation of compounds of formula (I), which are useful intermediates in the synthesis of Upadacitinib and structurally related compounds, by using Weinreb amide (III), or an equivalent thereof, as key intermediate.

Claims (136)

1 . A process for preparing a compound of formula (I′-cis) or a salt or solvate thereof

wherein

X is a leaving group, and

R 1 is selected from H and amino protecting group;

which comprises:

(a) converting a compound of formula (II) or a salt or solvate thereof

wherein

is a cis single bond or a double bond;

Y is selected from OH, Cl, OR 2 and OC(O)R 2 , wherein R 2 is selected from C 1 -C 6 alkyl, (C 6 -C 15 )aryl(C 1 -C 6 )alkyl and C 6 -C 15 aryl; and

R 1 is selected from H and amino protecting group;

into a compound of formula (III) or (IV), or a salt or solvate thereof

wherein

is a cis single bond or a double bond; and

R 1 is selected from H and amino protecting group; and

(b) converting a compound of formula (III) or (IV), or a salt or solvate thereof, into a compound of formula (I′-cis), or a salt or solvate thereof, by a process comprising:

(bi) reacting the compound of formula (III) or (IV), or a salt or solvate thereof, with MeMgCl, MeMgBr or MeLi to provide a ketone of formula (V) or a salt or solvate thereof

wherein

is a cis single bond or a double bond; and

R 1 is selected from H and amino protecting group;

(bii) converting a ketone of formula (V), or a salt or solvate thereof, into an enol ether of formula (VI) or an enamine of formula (VII) or a salt or solvate thereof

wherein

is a cis single bond or a double bond; and

R 1 is selected from H and amino protecting group;

R 3 is selected from C 1 -C 6 alkyl, (C 6 -C 15 )aryl(C 1 -C 6 )alkyl, C 6 -C 15 aryl, COR′ and SiR′ 3 , wherein each R′ is independently selected from C 1-6 alkyl, C 3 -C 10 cycloalkyl, C 6-15 aryl and (C 6 -C 15 )aryl(C 1 -C 6 )alkyl; and

R 4 and R 5 are independently selected from C 1 -C 6 alkyl, (C 6 -C 15 )aryl(C 1 -C 6 )alkyl and C 6 -C 15 aryl or they form, together with the nitrogen atom to which they are attached, a 5- to 7-membered heterocyclic ring; and

(biii) converting an enol ether of formula (VI) or an enamine of formula (VII), or a salt or solvate thereof, into a compound of formula (I′-cis) or a salt or solvate thereof; or

(bi′) reacting the compound of formula (III) or (IV), or a salt or solvate thereof, with X—CH 2 —Li, X—CH 2 —MgCl or X—CH 2 —MgBr, to provide a compound of formula (I′-cis) or a salt or solvate thereof; or

(bi″) reacting the compound of formula (III) or (IV), or a salt or solvate thereof, with R 6 O—CH 2 —Li, R 6 O—CH 2 —MgCl or R 6 O—CH 2 —MgBr, to provide a compound of formula (VIII) or a salt or solvate thereof

wherein

is a cis single bond or a double bond;

R 1 is selected from H and amino protecting group; and

R 6 is a selected from H, —COR′ and —CONR′R″, wherein R′ and R″ are independently selected from C 1 -C 6 alkyl, C 6 -C 15 aryl and (C 6 -C 15 )aryl(C 1 -C 6 )alkyl; and

(bii″) converting a compound of formula (VIII), or a salt or solvate thereof, into a compound of formula (I′-cis) or a salt or solvate thereof.

2 . The process according to claim 1 , wherein in the compound of formula (II), or a salt or solvate thereof, is a double bond and the process further comprises a hydrogenation step after step (a), or (bi), or (bii), or (biii), or (bi′), or (bi″), or (bii″).

3 . The process according to claim 1 , wherein is a cis single bond in the compounds of formula (II), (III), (IV), (V), (VI), (VII) and (VIII).

4 . The process according to claim 3 , wherein the compound of formula (II) wherein is a cis single bond, or a salt or solvate thereof, is obtained by hydrogenating a compound of formula (II″) or a salt or solvate thereof

wherein

Y is selected from OH, Cl, OR 2 and OC(O)R 2 , wherein R 2 is selected from C 1 -C 6 alkyl, (C 6 -C 15 )aryl(C 1 -C 6 )alkyl and C 6 -C 15 aryl; and

R 1 is selected from H and amino protecting group.

5 . The process according to claim 1 , comprising:

(a) converting a compound of formula (II″) or a salt or solvate thereof

wherein

Y is selected from OH, Cl, OR 2 and OC(O)R 2 , wherein R 2 is selected from C 1 -C 6 alkyl, (C 6 -C 15 )aryl(C 1 -C 6 )alkyl and C 6 -C 15 aryl; and

R 1 is selected from H and amino protecting group;

into a compound of formula (III″) or (IV″) or a salt or solvate thereof

(b1) hydrogenating a compound of formula (III″) or (IV″), or a salt or solvate thereof, to provide a compound of formula (III′-cis) or (IV′-cis) or a salt or solvate thereof

and

(b2) converting a compound of formula (III′-cis) or (IV′-cis), or a salt or solvate thereof, into a compound of formula (I′-cis), or a salt or solvate thereof, by a process comprising:

(bi) reacting the compound of formula (III′-cis) or (IV′-cis), or a salt or solvate thereof, with MeMgCl, MeMgBr or MeLi to provide a ketone of formula (V′-cis) or a salt or solvate thereof

(bii) converting a ketone of formula (V′-cis), or a salt or solvate thereof, into an enol ether of formula (VI′-cis) or an enamine of formula (VII′-cis) or a salt or solvate thereof

wherein

R 3 is selected from C 1 -C 6 alkyl, (C 6 -C 15 )aryl(C 1 -C 6 )alkyl, C 6 -C 15 aryl, COR′ and SiR′ 3 , wherein each R′ is independently selected from C 1-6 alkyl, C 3 -C 10 cycloalkyl, C 6-15 aryl and (C 6 -C 15 )aryl(C 1 -C 6 )alkyl; and

R 4 and R 5 are independently selected from C 1 -C 6 alkyl, (C 6 -C 15 )aryl(C 1 -C 6 )alkyl and C 6 -C 15 aryl or they form, together with the nitrogen atom, a 5- to 7-membered heterocyclic ring; and

(biii) converting an enol ether of formula (VI′-cis) or an enamine of formula (VII′-cis), or a salt or solvate thereof, into a compound of formula (I′-cis) or a salt or solvate thereof; or

(bi′) reacting the compound of formula (III′-cis) or (IV′-cis), or a salt or solvate thereof, with X—CH 2 —Li, X—CH 2 —MgCl or X—CH 2 —MgBr, to provide a compound of formula (I′-cis) or a salt or solvate thereof; or

(bi″) reacting the compound of formula (III′-cis) or (IV′-cis), or a salt or solvate thereof, with R 60 —CH 2 —Li, R 60 —CH 2 —MgCl or R 60 —CH 2 —MgBr, to provide a compound of formula (VIII′-cis) or a salt or solvate thereof

wherein

R 1 is selected from H, and amino protecting group; and

R 6 is selected from H, —COR′ and —CONR′R″, wherein R′ and R″ are independently selected from C 1 -C 6 alkyl, C 6 -C 15 aryl and (C 6 -C 15 )aryl(C 1 -C 6 )alkyl; and

(bii″) converting a compound of formula (VIII′-cis), or a salt or solvate thereof, into a compound of formula (I′-cis) or a salt or solvate thereof.

6 . The process according to claim 1 , comprising:

(a) converting a compound of formula (II″) or a salt or solvate thereof

wherein

Y is selected from OH, Cl, OR 2 and OC(O)R 2 , wherein R 2 is selected from C 1 -C 6 alkyl, (C 6 -C 15 )aryl(C 1 -C 6 )alkyl and C 6 -C 15 aryl; and

R 1 is selected from H and amino protecting group;

into a compound of formula (III″) or (IV″) or a salt or solvate thereof

and

(b) converting a compound of formula (III″) or (IV″), or a salt or solvate thereof, into a compound of formula (I′-cis), or a salt or solvate thereof, by a process comprising:

(bi1) reacting the compound of formula (III″) or (IV″), or a salt or solvate thereof, with MeMgCl, MeMgBr or MeLi to provide a ketone of formula (V″) or a salt or solvate thereof

(bi2) hydrogenating a compound of formula (V″), or a salt or solvate thereof, to provide a compound of formula (V′-cis) or a salt or solvate thereof

(bii) converting a ketone of formula (V′-cis), or a salt or solvate thereof, into an enol ether of formula (VI′-cis) or an enamine of formula (VII′-cis) or a salt or solvate thereof

wherein

R 3 is selected from C 1 -C 6 alkyl, (C 6 -C 15 )aryl(C 1 -C 6 )alkyl, C 6 -C 15 aryl, COR′ and SiR′ 3 , wherein each R′ is independently selected from C 1-6 alkyl, C 3 -C 10 cycloalkyl, C 6-15 aryl and (C 6 -C 15 )aryl(C 1 -C 6 )alkyl and

R 4 and R 5 are independently selected from C 1 -C 6 alkyl, (C 6 -C 15 )aryl(C 1 -C 6 )alkyl and C 6 -C 15 aryl or they form, together with the nitrogen atom, a 5- to 7-membered heterocyclic ring; and

(biii) converting an enol ether of formula (VI′-cis) or an enamine of formula (VII′-cis), or a salt or solvate thereof, into a compound of formula (I′-cis) or a salt or solvate thereof.

7 . The process according to claim 1 , comprising:

(a) converting a compound of formula (II″) or a salt or solvate thereof

wherein

Y is selected from OH, Cl, OR 2 and OC(O)R 2 , wherein R 2 is selected from C 1 -C 6 alkyl, (C 6 -C 15 )aryl(C 1 -C 6 )alkyl and C 6 -C 15 aryl; and

R 1 is selected from H and amino protecting group;

into a compound of formula (III″) or (IV″) or a salt or solvate thereof

(b) converting a compound of formula (III″) or (IV″), or a salt or solvate thereof, into a compound of formula (I′), or a salt or solvate thereof, by a process comprising:

(bi) reacting the compound of formula (III″) or (IV″), or a salt or solvate thereof, with MeMgCl, MeMgBr or MeLi to provide a ketone of formula (V″) or a salt or solvate thereof

(bii) converting a ketone of formula (V″), or a salt or solvate thereof, into an enol ether of formula (VI″) or an enamine of formula (VII″) or a salt or solvate thereof

wherein

R 3 is selected from C 1 -C 6 alkyl, (C 6 -C 15 )aryl(C 1 -C 6 )alkyl, C 6 -C 15 aryl, COR′ and SiR′ 3 , wherein each R′ is independently selected from C 1-6 alkyl, C 3 -C 10 cycloalkyl, C 6-15 aryl and (C 6 -C 15 )aryl(C 1 -C 6 )alkyl; and

R 4 and R 5 are independently selected from C 1 -C 6 alkyl, (C 6 -C 15 ) aryl(C 1 -C 6 )alkyl and C 6 -C 15 aryl or they form, together with the nitrogen atom, a 5- to 7-membered heterocyclic ring; and

(biii) converting an enol ether of formula (VI″) or an enamine of formula (VII″), or a salt or solvate thereof, into a compound of formula (I″) or a salt or solvate thereof

wherein

X is a leaving group, and

R 1 is selected from H, and amino protecting group; and

(biv) hydrogenating a compound of formula (I″), or a salt or solvate thereof, to provide a compound of formula (I′-cis) or a salt or solvate thereof; or

(bi′) reacting the compound of formula (III″) or (IV″), or a salt or solvate thereof, with X—CH 2 —Li, X—CH 2 —MgCl or X—CH 2 —MgBr, wherein X is a leaving group, to provide a compound of formula (I″) or a salt or solvate thereof

and

(bii′) hydrogenating a compound of formula (I″), or a salt or solvate thereof, to provide a compound of formula (I′-cis) or a salt or solvate thereof; or

(bi″) reacting the compound of formula (III″) or (IV″), or a salt or solvate thereof, with R 6 O—CH 2 —Li, R 6 O—CH 2 —MgCl or R 6 O—CH 2 —MgBr, to provide a compound of formula (VIII′) or a salt or solvate thereof

wherein

R 1 is selected from H, and amino protecting group; and

R 6 is selected from H, —COR′ and —CONR′R″, wherein R′ and R″ are independently selected from C 1 -C 6 alkyl, C 6 -C 15 aryl and (C 6 -C 15 )aryl(C 1 -C 6 )alkyl;

(bii″) converting a compound of formula (VIII″), or a salt or solvate thereof, into a compound of formula (I″) or a salt or solvate thereof

and

(biii″) hydrogenating a compound of formula (I″), or a salt or solvate thereof, to provide a compound of formula (I′-cis) or a salt or solvate thereof.

8 . The process according to claim 1 , wherein:

X is selected from Cl, Br and I; and/or

R 1 is an amino protecting group; and/or

Y is selected from OH and OR 2 , wherein R 2 is selected from C 1 -C 6 alkyl, (C 6 -C 15 )aryl(C 1 -C 6 )alkyl and C 6 -C 15 aryl; and/or

R 6 is selected from H, —COR′ and —CONR′R″, wherein R′ and R″ are independently selected from C 1 -C 6 alkyl, C 6 -C 15 aryl and (C 6 -C 15 )aryl(C 1 -C 6 )alkyl.

9 . The process according to claim 1 , wherein when is a cis single bond in the compound of formula (I′-cis), or (II), or (III), or (IV), or (V), or (VI), or (VII), or (VIII), said compound is a compound of formula (I′-cis-3R), or (II′-cis-3R), or (III′-cis-3R), or (IV′-cis-3R), or (V′-cis-3R), or (VI′-cis-3R), or (VII′-cis-3R), or (VIII′-cis-3R), respectively

or a salt or solvate thereof, wherein

X is a leaving group;

Y is selected from OH, Cl, OR 2 and OC(O)R 2 , wherein R 2 is selected from C 1 -C 6 alkyl, (C 6 -C 15 )aryl(C 1 -C 6 )alkyl and C 6 -C 15 aryl;

R 1 is selected from H and amino protecting group;

R 3 is selected from C 1 -C 6 alkyl, (C 6 -C 15 )aryl(C 1 -C 6 )alkyl, C 6 -C 15 aryl, COR′ and SiR′ 3 , wherein each R′ is independently selected from C 1-6 alkyl, C 3 -C 10 cycloalkyl, C 6-15 aryl and (C 6 -C 15 )aryl(C 1 -C 6 )alkyl;

R 4 and R 5 are independently selected from C 1 -C 6 alkyl, (C 6 -C 15 )aryl(C 1 -C 6 )alkyl and C 6 -C 15 aryl or they form, together with the nitrogen atom, a 5- to 7-membered heterocyclic ring; and

R 6 is selected from H, —COR′ and —CONR′R″, wherein R′ and R″ are independently selected from C 1 -C 6 alkyl, C 6 -C 15 aryl and (C 6 -C 15 )aryl(C 1 -C 6 )alkyl.

10 . The process according to claim 1 , wherein the compound of formula (II), or a salt or solvate thereof, is obtained by a process comprising:

reacting a compound of formula (IX) or a salt or solvate thereof

wherein

Z is selected from halogen, C 1 -C 6 alkylsulfonates, C 1 -C 6 haloalkylsulfonates, C 6 -C 10 arylsulfonates and (C 1 -C 6 )alkyl(C 6 -C 10 )arylsulfonates;

R 1 is selected from H and amino protecting group; and

Y is selected from OH, Cl, OR 2 and OC(O)R 2 , wherein R 2 is selected from C 1 -C 6 alkyl, (C 6 -C 15 )aryl(C 1 -C 6 )alkyl and C 6 -C 15 aryl;

with Et 2 CuLi, Et 2 CuMgBr or Et 2 CuMgCl, to provide a compound of formula (II), or a salt or solvate thereof, wherein is a double bond; and

if a compound of formula (II) wherein is a cis single bond is desired, hydrogenating the double bond to provide a compound of formula (II), or a salt or solvate thereof, wherein is a cis single bond.

11 . The process according to claim 1 , wherein the compound of formula (I′-cis), or a salt or solvate thereof, is converted into Upadacitinib, or a salt or solvate or stereoisomer thereof.

12 . The process according to claim 1 , wherein the compound of formula (I′-cis) or a salt or solvate thereof is a compound of formula (I′-cis-3R) or a salt or solvate thereof

wherein

X is a leaving group, and

R 1 is selected from H, and amino protecting group; and

wherein the compound of formula (II), (III), (IV), (V), (VI), (VII) and (VIII) are, respectively, a compound of formula (II′-cis-3R), (III′-cis-3R), (IV′-cis-3R), (V′-cis-3R), (VI′-cis-3R), (VII′-cis-3R), or (VIII′-cis-3R)

or a salt or solvate thereof, wherein

X is a leaving group;

Y is selected from OH, Cl, OR 2 and OC(O)R 2 , wherein R 2 is selected from C 1 -C 6 alkyl, (C 6 -C 15 )aryl(C 1 -C 6 )alkyl and C 6 -C 15 aryl;

R 1 is selected from H and amino protecting group;

R 3 is selected from C 1 -C 6 alkyl, (C 6 -C 15 )aryl(C 1 -C 6 )alkyl, C 6 -C 15 aryl, COR′ and SiR′ 3 , wherein each R′ is independently selected from C 1-6 alkyl, C 3 -C 10 cycloalkyl, C 6-15 aryl and (C 6 -C 15 )aryl(C 1 -C 6 )alkyl;

R 4 and R 5 are independently selected from C 1 -C 6 alkyl, (C 6 -C 15 )aryl(C 1 -C 6 )alkyl and C 6 -C 15 aryl or they form, together with the nitrogen atom, a 5- to 7-membered heterocyclic ring; and

R 6 is selected from H, —COR′ and —CONR′R″, wherein R′ and R″ are independently selected from C 1 -C 6 alkyl, C 6 -C 15 aryl and (C 6 -C 15 )aryl(C 1 -C 6 )alkyl.

Assignments (2)
CHANGE OF NAME Recorded Nov 5, 2025
From: CRYSTAL PHARMA, S.A.U.
To: CURIA SPAIN, S.A.U.
Reel/Frame 073449/0630 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Dec 28, 2022
From: SAINZ, YOLANDA FERNANDEZ; BONDE-LARSEN, ANTONIO LORENTE; ENCABO, ALFONSO PEREZ; HERNANDEZ, JOSE ANGEL TURIEL; PULIDO, JOSE ENRIQUE GOMEZ; MUNOZ, MARIO LADERAS
To: CURIA SPAIN, S.A.U.
Reel/Frame 062220/0973 →
Priority Claims (1)
EP 19383150 · Dec 19, 2019 · regional
Continuity (1)
Related Publication 20230139156A1 · May 4, 2023
References Cited (23)
US 20180298016A1 · Pangan · 2018 [cited by examiner]
US 20210323971A1 · Wang · 2021 [cited by examiner]
CN 109369659A · 2019 [cited by applicant]
JP 2010006722A · 2010 [cited by applicant]
WO 2007117381A2 · 2007 [cited by applicant]
WO 2008118718A2 · 2008 [cited by applicant]
WO 2011068881A1 · 2011 [cited by applicant]
WO 2013043826A1 · 2013 [cited by applicant]
WO 2017005786A1 · 2017 [cited by applicant]
WO 2017066775A1 · 2017 [cited by applicant]
WO 2018009424A1 · 2018 [cited by applicant]
WO 2019016745A1 · 2019 [cited by applicant]
WO 2019212927A1 · 2019 [cited by applicant]
WO 2020043033A2 · 2020 [cited by applicant]
WO 20200202183A1 · 2020 [cited by applicant]
Eugene C. Ashby et al., Reactions of new organocuprates. 2. Substitution reactions of alkyl, cycloalkyl, and aryl halides with lithium trimethyldicuprate, dilithium trimethylcuprate, and dilithium pentamethyltricuprate … [cited by examiner]
International Search Report and Written Opinion for corresponding Application No. PCT/EP2020/087194 (mailed Feb. 12, 2021). [cited by applicant]
Database Pubchem Substance (CID: 134531173): benzyl (3R, 4S)-3-acetyl-4-ethylpyrrolidine-1-carboxylate. [cited by applicant]
Gajdosik et al., “Upadacitinib Tartrate,” Drugs of the Future 43(10):731-743 (2018). [cited by applicant]
Greene and Wuts, eds., Protective groups in Organic Synthesis, 3rd Ed., New York, NY: John Wiley & Sons, Inc., pp. 494-502, 531, 604-605 (1999). [cited by applicant]
Harada et al., “Synthesis of the ABC Ring System of Jiadifenin via Pd-catalyzed Cyclizations,” Org. Lett. 13 (5):988-991 (2011). [cited by applicant]
Heindl et al., “Enantiospecific Synthesis and Receptor Binding of Novel Dopamine Receptor Ligands Employing Natural 4-hydroxyproline as a Practical and Flexible Building Block,” Tetrahedron: Asymmetry 14(20):3153-3172 (… [cited by applicant]
Trost et al., “A Mechanistic Dichotomy in Ruthenium-catalyzed Propargyl Alcohol Reactivity: A Novel Hydrative Diyne Cyclization,” J. Am. Chem. Soc. 125(38):11516-11517 (2003). [cited by applicant]