Antibodies to plasminogen activator inhibitor-1 (PAI-1) and uses thereof
The invention provides antibodies that specifically bind to Plasminogen Activator inhibitor type-1 (PAI-1), The invention also provides pharmaceutical compositions, as well as nucleic acids encoding anti-PAI-1 antibodies, recombinant expression vectors and host cells for making such antibodies, or fragments thereof. Methods of using antibodies to modulate PAI-1 activity or detect PAI-1, either in vitro or in vivo, are also provided. The disclosure further provides methods of making antibodies that specifically bind to PAI-1 in the active conformational state.
1 . An isolated nucleic acid encoding an amino acid sequence of an antibody, or an antigen-binding fragment thereof, that binds specifically to PA1-1, comprising:
(a) a heavy chain variable region comprising a heavy chain CDR1 region comprising the amino acid sequence of SEQ ID NO: 34, a heavy chain CDR2 region comprising the amino acid sequence of SEQ ID NO: 33, and a heavy chain CDR3 region comprising the amino acid sequence of SEQ ID NO: 32; and a light chain variable region comprising a light chain CDR1 region comprising the amino acid sequence of SEQ ID NO: 37, a light chain CDR2 region comprising the amino acid sequence of SEQ ID NO: 145 or SEQ ID NO: 36, and a light chain CDR3 region comprising the amino acid sequence of SEQ ID NO: 35; or
(b) a heavy chain variable region comprising a heavy chain CDR1 region comprising the amino acid sequence of SEQ ID NO: 22, a heavy chain CDR2 region comprising the amino acid sequence of SEQ ID NO: 21, and a heavy chain CDR3 region comprising the amino acid sequence of SEQ ID NO: 20; and a light chain variable region comprising a light chain CDR1 region comprising the amino acid sequence of SEQ ID NO: 25, a light chain CDR2 region comprising the amino acid sequence of SEQ ID NO: 24, and a light chain CDR3 region comprising the amino acid sequence of SEQ ID NO: 23; or
(c) a heavy chain variable region comprising a heavy chain CDR1 region comprising the amino acid sequence of SEQ ID NO: 28, a heavy chain CDR2 region comprising the amino acid sequence of SEQ ID NO: 27, and a heavy chain CDR3 region comprising the amino acid sequence of SEQ ID NO: 26; and a light chain variable region comprising a light chain CDR1 region comprising the amino acid sequence of SEQ ID NO: 31, a light chain CDR2 region comprising the amino acid sequence of SEQ ID NO: 30, and a light chain CDR3 region comprising the amino acid sequence of SEQ ID NO: 29; or
(d) a heavy chain variable region comprising a heavy chain CDR1region comprising the amino acid sequence of SEQ ID NO: 40, a heavy chain CDR2 region comprising the amino acid sequence of SEQ ID NO: 39, and a heavy chain CDR3 region comprising the amino acid sequence of SEQ ID NO: 38; and a light chain variable region comprising a light chain CDR1 region comprising the amino acid sequence of SEQ ID NO: 43, a light chain CDR2 region comprising the amino acid sequence of SEQ ID NO: 42, and a light chain CDR3 region comprising the amino acid sequence of SEQ ID NO: 41; or
(e) a heavy chain variable region comprising a heavy chain CDR 1region comprising the amino acid sequence of SEQ ID NO: 46, a heavy chain CDR2 region comprising the amino acid sequence of SEQ ID NO: 45, and a heavy chain CDR3 region comprising the amino acid sequence of SEQ ID NO: 44; and a light chain variable region comprising a light chain CDR1 region comprising the amino acid sequence of SEQ ID NO: 49, a light chain CDR2 region comprising the amino acid sequence of SEQ ID NO: 48, and a light chain CDR3 region comprising the amino acid sequence of SEQ ID NO: 47; or
(f) a heavy chain variable region comprising a heavy chain CDR1region comprising the amino acid sequence of SEQ ID NO: 52, a heavy chain CDR2 region comprising the amino acid sequence of SEQ ID NO: 51, and a heavy chain CDR3 region comprising the amino acid sequence of SEQ ID NO: 50; and a light chain variable region comprising a light chain CDR1 region comprising the amino acid sequence of SEQ ID NO: 55, a light chain CDR2 region comprising the amino acid sequence of SEQ ID NO: 54, and a light chain CDR3 region comprising the amino acid sequence of SEQ ID NO: 53; or
(g) a heavy chain variable region comprising a heavy chain CDR 1region comprising the amino acid sequence of SEQ ID NO: 58, a heavy chain CDR2 region comprising the amino acid sequence of SEQ ID NO: 57, and heavy chain CDR3 region comprising the amino acid sequence of SEQ ID NO: 56; and a light chain variable region comprising a light chain CDR1region comprising the amino acid sequence of SEQ ID NO: 61, a light chain CDR2 region comprising the amino acid sequence of SEQ ID NO: 60, and a light chain CDR3 region comprising the amino acid sequence of SEQ ID NO: 59; or
(h) a heavy chain variable region comprising a heavy chain CDR1region comprising the amino acid sequence of SEQ ID NO: 64, a heavy chain CDR2 region comprising the amino acid sequence of SEQ ID NO: 63, and a heavy chain CDR3 region comprising the amino acid sequence of SEQ ID NO: 62; and a light chain variable region comprising a light chain CDR1 region comprising the amino acid sequence of SEQ ID NO: 67, a light chain CDR2 region comprising the amino acid sequence of SEQ ID NO: 66, and a light chain CDR3 region comprising the amino acid sequence of SEQ ID NO: 65; or
(i) a heavy chain variable region comprising a heavy chain CDR1region comprising the amino acid sequence of SEQ ID NO: 70, a heavy chain CDR2 region comprising the amino acid sequence of SEQ ID NO: 69, and a heavy chain CDR3 region comprising the amino acid sequence of SEQ ID NO: 68; and a light chain variable region comprising a light chain CDR1 region comprising the amino acid sequence of SEQ ID NO: 73, a light chain CDR2 region comprising the amino acid sequence of SEQ ID NO: 72, and a light chain CDR3 region comprising the amino acid sequence of SEQ ID NO: 71; or
(j) a heavy chain variable region comprising a heavy chain CDR1region comprising the amino acid sequence of SEQ ID NO: 76, heavy chain CDR2 region comprising the amino acid sequence of SEQ ID NO: 75, and a heavy chain CDR3 region comprising the amino acid sequence of SEQ ID NO: 74; and a light chain variable region comprising a light chain CDR1 region comprising the amino acid sequence of SEQ ID NO: 79, a light chain CDR2 region comprising the amino acid sequence of SEQ ID NO: 78, and a light chain CDR3 region comprising the amino acid sequence of SEQ ID NO: 77.
2 . A recombinant expression vector comprising the nucleic acid of claim 1 .
3 . A host cell comprising the recombinant expression vector of claim 2 .
4 . A method of producing an antibody, or an antigen binding fragment thereof, that binds specifically to PAI-1, comprising culturing the host cell of claim 3 under conditions such that the antibody, or antigen binding fragment thereof, that binds specifically to PAI-1 is produced by the host cell.
5 . The method of claim 4 , wherein the antibody or antigen binding fragment thereof comprises:
a heavy chain variable region comprising a heavy chain CDR1 region comprising the amino acid sequence of SEQ ID NO: 34, a heavy chain CDR2 region comprising the amino acid sequence of SEQ ID NO: 33, and a heavy chain CDR3 region comprising the amino acid sequence of SEQ ID NO: 32; and
a light chain variable region comprising a light chain CDR1 region comprising the amino acid sequence of SEQ ID NO: 37, a light chain CDR2 region comprising the amino acid sequence of SEQ ID NO: 145 or the amino acid sequence of SEQ ID NO: 36, and a light chain CDR3 region comprising the amino acid sequence of SEQ ID NO: 35.
6 . The method of claim 5 , wherein the antibody or antigen binding fragment thereof comprises:
a heavy chain variable region comprising a heavy chain CDR1 region comprising the amino acid sequence of SEQ ID NO: 22, a heavy chain CDR2 region comprising SEQ ID NO: 21, and a heavy chain CDR3 region comprising the amino acid sequence of SEQ ID NO: 20; and
a light chain variable region comprising a light chain CDR1 region comprising the amino acid sequence of SEQ ID NO: 25, a light chain CDR2 region comprising the amino acid sequence of SEQ ID NO: 24, and a light chain CDR3 region comprising the amino acid sequence of SEQ ID NO: 23.
7 . The method of claim 4 , wherein the antibody or antigen binding fragment thereof comprises:
a heavy chain variable region comprising a heavy chain CDR1 region comprising the amino acid sequence of SEQ ID NO: 28, a heavy chain CDR2 region comprising the amino acid sequence of SEQ ID NO: 27, and a heavy chain CDR3 region comprising the amino acid sequence of SEQ ID NO: 26; and
a light chain variable region comprising a light chain CDR1 region comprising the amino acid sequence of SEQ ID NO: 31, a light chain CDR2 region comprising the amino acid sequence of SEQ ID NO: 30, and a light chain CDR3 region comprising the amino acid sequence of SEQ ID NO: 29.
8 . The method of claim 4 , wherein the antibody or antigen binding fragment thereof comprises:
a heavy chain variable region comprising a heavy chain CDR1 region comprising the amino acid sequence of SEQ ID NO: 40, a heavy chain CDR2 region comprising the amino acid sequence of SEQ ID NO: 39, and a heavy chain CDR3 region comprising the amino acid sequence of SEQ ID NO: 38; and
a light chain variable region comprising a light chain CDR1 region comprising the amino acid sequence of SEQ ID NO: 43, a light chain CDR2 region comprising the amino acid sequence of SEQ ID NO: 42, and a light chain CDR3 region comprising the amino acid sequence of SEQ ID NO: 41.
9 . The method of claim 4 , wherein the antibody or antigen binding fragment thereof comprises:
a heavy chain variable region comprising a heavy chain CDR1 region comprising the amino acid sequence of SEQ ID NO: 46, a heavy chain CDR2 region comprising the amino acid sequence of SEQ ID NO: 45, and a heavy chain CDR3 region comprising the amino acid sequence of SEQ ID NO: 44; and
a light chain variable region comprising a light chain CDR1 region comprising the amino acid sequence of SEQ ID NO: 49, a light chain CDR2 region comprising the amino acid sequence of SEQ ID NO: 48, and a light chain CDR3 region comprising the amino acid sequence of SEQ ID NO: 47.
10 . The method of claim 4 , wherein the antibody or antigen binding fragment thereof comprises:
a heavy chain variable region comprising a heavy chain CDR1 region comprising the amino acid sequence of SEQ ID NO: 52, a heavy chain CDR2 region comprising the amino acid sequence of SEQ ID NO: 51, and a heavy chain CDR3 region comprising the amino acid sequence of SEQ ID NO: 50; and
a light chain variable region comprising a light chain CDR1 region comprising the amino acid sequence of SEQ ID NO: 55, a light chain CDR2 region comprising the amino acid sequence of SEQ ID NO: 54, and a light chain CDR3 region comprising the amino acid sequence of SEQ ID NO: 53.
11 . The method of claim 4 , wherein the antibody or antigen binding fragment thereof comprises:
a heavy chain variable region comprising a heavy chain CDR1 region comprising the amino acid sequence of SEQ ID NO: 58, a heavy chain CDR2 region comprising the amino acid sequence of SEQ ID NO: 57, and a heavy chain CDR3 region comprising the amino acid sequence of SEQ ID NO: 56; and
a light chain variable region comprising a light chain CDR1 region comprising the amino acid sequence of SEQ ID NO: 61, a light chain CDR2 region comprising the amino acid sequence of SEQ ID NO: 60, and a light chain CDR3 region comprising the amino acid sequence of SEQ ID NO: 59.
12 . The method of claim 4 , wherein the antibody or antigen binding fragment thereof comprises:
a heavy chain variable region comprising a heavy chain CDR1 region comprising the amino acid sequence of SEQ ID NO: 64, a heavy chain CDR2 region comprising the amino acid sequence of SEQ ID NO: 63, and a heavy chain CDR3 region comprising the amino acid sequence of SEQ ID NO: 62; and
a light chain variable region comprising a light chain CDR1 region comprising the amino acid sequence of SEQ ID NO: 67, a light chain CDR2 region comprising the amino acid sequence of SEQ ID NO: 66, and a light chain CDR3 region comprising the amino acid sequence of SEQ ID NO: 65.
13 . The method of claim 4 , wherein the antibody or antigen binding fragment thereof comprises:
a heavy chain variable region comprising a heavy chain CDR1 region comprising the amino acid sequence of SEQ ID NO: 70, a heavy chain CDR2 region comprising the amino acid sequence of SEQ ID NO: 69, and a heavy chain CDR3 region comprising the amino acid sequence of SEQ ID NO: 68; and
a light chain variable region comprising a light chain CDR1 region comprising the amino acid sequence of SEQ ID NO: 73, a light chain CDR2 region comprising the amino acid sequence of SEQ ID NO: 72, and a light chain CDR3 region comprising the amino acid sequence of SEQ ID NO: 71.
14 . The method of claim 4 , wherein the antibody or antigen binding fragment thereof comprises:
a heavy chain variable region comprising a heavy chain CDR1 region comprising the amino acid sequence of SEQ ID NO: 76, a heavy chain CDR2 region comprising the amino acid sequence of SEQ ID NO: 75, and a heavy chain CDR3 region comprising the amino acid sequence of SEQ ID NO: 74; and
a light chain variable region comprising a light chain CDR1 region comprising the amino acid sequence of SEQ ID NO: 79, a light chain CDR2 region comprising the amino acid sequence of SEQ ID NO: 78, and a light chain CDR3 region comprising the amino acid sequence of SEQ ID NO: 77.
15 . An isolated nucleic acid encoding an amino acid sequence of an antibody, or an antigen-binding fragment thereof, that binds specifically to PA1-1, comprising:
(a) a heavy chain having a heavy chain variable region comprising the amino acid sequence of SEQ ID NO: 82, and a light chain having a light chain variable region comprising the amino acid sequence of SEQ ID NO: 91; or
(b) a heavy chain having a heavy chain variable region comprising the amino acid sequence of SEQ ID NO: 83, and a light chain having a light chain variable region comprising the amino acid sequence of SEQ ID NO: 92; or
(c) a heavy chain having a heavy chain variable region comprising the amino acid sequence of SEQ ID NO: 84, and a light chain having a light chain variable region comprising the amino acid sequence of SEQ ID NO: 93; or
(d) a heavy chain having a heavy chain variable region comprising the amino acid sequence of SEQ ID NO: 85, and a light chain having a light chain variable region comprising the amino acid sequence of SEQ ID NO: 91; or
(e) a heavy chain having a heavy chain variable region comprising the amino acid sequence of SEQ ID NO: 85, and a light chain having a light chain variable region comprising the amino acid sequence of SEQ ID NO: 93; or
(f) a heavy chain having a heavy chain variable region comprising the amino acid sequence of SEQ ID NO: 86, and a light chain having a light chain variable region comprising the amino acid sequence of SEQ ID NO: 94; or
(g) a heavy chain having a heavy chain variable region comprising the amino acid sequence of SEQ ID NO: 87, and a light chain having a light chain variable region comprising the amino acid sequence of SEQ ID NO: 95; or
(h) a heavy chain having a heavy chain variable region comprising the amino acid sequence of SEQ ID NO: 88, and a light chain having a light chain variable region comprising the amino acid sequence of SEQ ID NO: 96; or
(i) a heavy chain having a heavy chain variable region comprising the amino acid sequence of SEQ ID NO: 89, and a light chain having a light chain variable region comprising the amino acid sequence of SEQ ID NO: 97; or
(j) a heavy chain having a heavy chain variable region comprising the amino acid sequence of SEQ ID NO: 90, and a light chain having a light chain variable region comprising the amino acid sequence of SEQ ID NO: 98; or
(k) a heavy chain having a heavy chain variable region comprising the amino acid sequence of SEQ ID NO: 86, and a light chain having a light chain variable region comprising the amino acid sequence of SEQ ID NO: 95; or
(l) a heavy chain having a heavy chain variable region comprising the amino acid sequence of SEQ ID NO: 89, and a light chain having a light chain variable region comprising the amino acid sequence of SEQ ID NO: 93; or
(m) a heavy chain having a heavy chain variable region comprising the amino acid sequence of SEQ ID NO: 89, and a light chain having a light chain variable region comprising the amino acid sequence of SEQ ID NO: 95; or
(n) a heavy chain having a heavy chain variable region comprising the amino acid sequence of SEQ ID NO: 86, and a light chain having a light chain variable region comprising the amino acid sequence of SEQ ID NO: 93.
16 . A recombinant expression vector comprising the nucleic acid of claim 15 .
17 . A host cell comprising the recombinant expression vector of claim 16 .
18 . A method of producing an antibody, or an antigen binding fragment thereof, that binds specifically to PAI-1, comprising culturing the host cell of claim 17 under conditions such that the antibody, or antigen binding fragment thereof, that binds specifically to PAI-1 is produced by the host cell.
19 . The method of claim 18 , wherein the antibody or antigen binding fragment thereof comprises:
a heavy chain having a heavy chain variable region comprising the amino acid sequence of SEQ ID NO: 86; and
a light chain having a light chain variable region comprising the amino acid sequence of SEQ ID NO: 93.