Microbial production of rotundone
The present disclosure provides methods and compositions for producing rotundone. In various aspects, the present disclosure provides enzymes, polynucleotides encoding said enzymes, and recombinant microbial host cells (or microbial host strains) for the production of rotundone. In some embodiments, the present disclosure provides microbial host cells for producing rotundone at high purity and/or yield, from either enzymatic transformation of α-guaiene, or from sugar or other carbon source. The present disclosure further provides methods of making products containing rotundone, including flavor or fragrance products, among others.
1. A microbial host cell for producing rotundone, the microbial cell expressing a heterologous α-guaiene synthase enzyme (αGTPS) and a heterologous α-guaiene oxidase (αGOX) enzyme; wherein the αGOX enzyme comprises an amino acid sequence that is at least 80% identical to SEQ ID NO: 51 or SEQ ID NO: 52.
2. The microbial cell of claim 1 , wherein the microbial host cell expresses a cytochrome P450 reductase enzyme.
3. The microbial cell of claim 2 , wherein the cytochrome P450 reductase enzyme comprises an amino acid sequence that is at least 90% identical to SEQ ID NO: 53 or SEQ ID NO: 33.
4. The microbial cell of claim 1 , wherein the αGTPS and αGOX are expressed together in an operon.
5. The microbial cell of claim 1 , wherein the microbial host cell further expresses one or more alcohol dehydrogenases (ADHs).
6. The microbial cell of claim 5 , wherein the ADH comprises an amino acid sequence of any one of SEQ ID NOs: 35-44, or an amino acid sequence that is at least 90% identical thereto.
7. The microbial cell of claim 5 , wherein the ADH comprises an amino acid sequence having 90% or more sequence identity to SEQ ID NO: 43.
8. The microbial cell of claim 1 , wherein the microbial host cell overexpresses one or more enzymes in a methylerythritol phosphate (MEP) or a mevalonic acid (MVA) pathway.
9. The microbial cell of claim 1 , wherein the microbial cell is a bacteria, optionally selected from Escherichia spp., Bacillus spp., Corynebacterium spp., Rhodobacter spp., Zymomonas spp., Vibrio spp., and Pseudomonas spp.
10. The microbial cell of claim 9 , wherein the microbial cell is Escherichia coli.
11. The microbial cell of claim 1 , wherein the microbial host cell is a yeast, optionally selected from Saccharomyces, Pichia , or Yarrowia.
12. The microbial cell of claim 1 , wherein the αGOX enzyme comprises an amino acid sequence that is at least 85% identical to SEQ ID NO: 51.
13. The microbial cell of claim 1 , wherein the αGOX enzyme comprises an amino acid sequence that is at least 90% identical to SEQ ID NO: 51.
14. The microbial cell of claim 1 , wherein the αGOX enzyme comprises an amino acid sequence that is at least 95% identical to SEQ ID NO: 51.
15. The microbial cell of claim 1 , wherein the αGOX enzyme comprises an amino acid sequence that is at least 85% identical to SEQ ID NO: 52.
16. The microbial cell of claim 1 , wherein the αGOX enzyme comprises an amino acid sequence that is at least 90% identical to SEQ ID NO: 52.
17. The microbial cell of claim 1 , wherein the αGOX enzyme comprises an amino acid sequence that is at least 95% identical to SEQ ID NO: 52.
18. The microbial cell of claim 1 , wherein αGTPS enzyme comprises an amino acid sequence that is at least 90% identical to an amino acid sequence selected from SEQ ID NOS: 1, 3, 4, 6-10, 11-15, and 19.
19. The microbial cell of claim 1 , wherein αGTPS enzyme comprises an amino acid sequence that is at least 90% identical to the amino acid sequence of SEQ ID NO: 8.
20. A method for making rotundone, comprising: culturing the microbial cell of claim 1 , and recovering the rotundone.
21. The method of claim 20 , wherein the culturing is performed using a batch culture, continuous culture, or semi-continuous culture that has a volume of at least 100 L.
22. The method of claim 21 , wherein the culture has a volume of at least 1000 L.
23. The method of claim 20 , wherein the rotundone is recovered by partitioning into an organic phase, followed by fractional distillation.
24. The method of claim 20 , wherein the culturing is a batch culture.