IP Library Patent Application 18537410
Patent Application
App. No. 18/537,410

BACTERIAL AND YEAST COMBINATIONS FOR REDUCING GREENHOUSE GAS PRODUCTION DURING FERMENTATION OF BIOMASS COMPRISING PENTOSES

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Patent No.
US None
App. No.
18/537,410
Abstract

The present disclosure concerns a symbiotic combination of a bacterial host cell and a yeast host cell selected or engineered to utilize glycerol to reduce greenhouse gases during the production of ethanol from a biomass comprising pentoses.

Claims (46)

1 . A combination for making ethanol from a biomass comprising pentoses, the combination comprising a yeast host cell and a bacterial host cell, wherein:

the bacterial host cell has:

a first metabolic pathway comprising one or more first polypeptides for converting pentoses or acetate into ethanol;

a second metabolic pathway comprising one or more second polypeptides for converting glycerol into dihydroxyacetone phosphate; and

a third metabolic pathway comprising one or more third heterologous polypeptides for converting pyruvate into ethanol; and

the yeast host cell has:

a fourth metabolic pathway comprising one or more fourth polypeptides for producing glycerol; and

a fifth metabolic pathway comprising one or more fifth heterologous polypeptides for converting pentoses into ethanol.

2 . The combination of claim 1 , wherein the pentoses comprise xylose and/or arabinose, optionally in combination with acetate and/or the biomass comprises lignocellulosic fibers.

3 . The combination of claim 1 , wherein the one or more first polypeptides comprise:

one or more native or heterologous polypeptides having phosphoketolase activity, wherein the phosphoketolase has single specificity or dual specificity and optionally exhibits a phosphatase activity;

one or more native or heterologous enzymes for converting acetate into acetyl-CoA; and/or

one or more native or heterologous enzymes for converting acetyl-CoA into acetaldehyde, and optionally acetaldehyde into ethanol.

4 . The combination of claim 3 , wherein:

the one or more native or heterologous enzymes for converting acetate into acetyl-CoA comprise:

a polypeptide having phosphotransacetylase (PTA) activity; and/or

a polypeptide having acetyl-CoA synthetase (ACS) activity; and/or

the one or more native or heterologous polypeptides for converting acetyl-CoA into acetaldehyde, and optionally acetaldehyde into ethanol, comprise:

a polypeptide having an acetaldehyde dehydrogenase (AADH) activity,

a polypeptide having an alcohol dehydrogenase activity; and/or

a polypeptide having a bifunctional acetaldehyde/alcohol dehydrogenase (ADHE) activity.

5 . The combination of claim 1 , wherein the second metabolic pathway is for the dehydrogenation of glycerol.

6 . The combination of claim 5 , wherein the one or more second polypeptides comprise:

a native or heterologous polypeptide having glycerol dehydrogenase (GLDA) activity, or a combination of the native and the heterologous polypeptides having GLDA activity,

a native or heterologous polypeptide having an ATP-dependent dihydroxyacetone kinase (DAK) activity, or a combination of the native and the heterologous polypeptides having DAK activity; and/or

a native or heterologous polypeptide having a PEP-dependent dihydroxyacetone kinase (DHAKLM) activity, or a combination of the native and the heterologous polypeptides having DHAKLM activity.

7 . The combination of claim 1 , wherein the one of or more third heterologous polypeptides comprise:

a native or heterologous polypeptide having pyruvate decarboxylase (PDC) activity; and/or

a native or heterologous polypeptide having alcohol dehydrogenase (ADH) activity.

8 . The combination of claim 1 , wherein the bacterial host cell is a lactic acid bacterium.

9 . The combination of claim 8 , wherein the bacterial host cell is from Lactiplantibacillus sp.

10 . The combination of claim 8 , wherein the bacterial host cell has a decreased lactate dehydrogenase activity and optionally at least one inactivated native gene coding for a lactate dehydrogenase.

11 . The combination of claim 1 , wherein the one or more fourth polypeptides comprise a native or heterologous polypeptide having glycerol-3-phosphate dehydrogenase activity and/or a polypeptide having glycerol-3-phosphate phosphatase activity.

12 . The combination of claim 1 , wherein the one or more fifth heterologous polypeptides comprise:

a polypeptide having xylose isomerase activity;

a polypeptide having xylose reductase activity and a polypeptide having xylose dehydrogenase activity; and/or

a polypeptide having arabinose isomerase activity, a polypeptide having ribulokinase activity, and a polypeptide having ribulose-5-phosphate-4-epimerase activity.

13 . The combination of claim 1 , wherein the yeast host cell is from Saccharomyces sp.

14 . A bacterial host cell for making ethanol from a biomass comprising pentoses, the bacterial host cell comprising:

a first metabolic pathway comprising one or more first polypeptides for converting pentoses or acetate into ethanol;

a second metabolic pathway comprising one or more second polypeptides for converting glycerol into dihydroxyacetone phosphate; and

a third metabolic pathway comprising one or more third heterologous polypeptides for converting pyruvate into ethanol.

15 . A composition comprising the combination of claim 1 and a biomass comprising pentoses.

16 . A process for converting a biomass comprising pentoses into ethanol, the process comprising contacting the biomass with the combination of claim 1 under a condition to allow the conversion of at least a part of the biomass into ethanol.

17 . A process for reducing the emission of CO 2 during the conversion of a biomass comprising pentoses into ethanol, the process comprising contacting the biomass with the combination of claim 1 under a condition to allow the conversion of at least a part of the biomass into ethanol, wherein the reduction in the emission of CO 2 is observed when comparing a process performed in the absence of the bacterial host cell.

18 . A process for improving the fermentation yield during the conversion of a biomass comprising pentoses into ethanol, the process comprising contacting the biomass with the combination of claim 1 under a condition to allow the conversion of at least a part of the biomass into ethanol, wherein the improvement in the fermentation yield is observed compared to a control process performed in the absence of the bacterial host cell.

Assignments (7)
CORRECTIVE ASSIGNMENT TO CORRECT THE ASSIGNEE'S ADDRESS PREVIOUSLY RECORDED ON REEL 74076 FRAME 586. ASSIGNOR(S) HEREBY CONFIRMS THE ASSIGNMENT OF ASSIGNOR'S INTEREST. Recorded Mar 20, 2026
From: LALLEMAND INC.
To: LALLEMAND HUNGARY LIQUIDITY MANAGEMENT LLC
Reel/Frame 075265/0128 →
CORRECTIVE ASSIGNMENT TO CORRECT THE ASSIGNEE'S ADDRESS PREVIOUSLY RECORDED ON REEL 74076 FRAME 546. ASSIGNOR(S) HEREBY CONFIRMS THE ASSIGNMENT OF ASSIGNOR'S INTEREST. Recorded Mar 20, 2026
From: FIRMINO, FERNANDA CRISTINA; HENNINGSEN, BROOKS; PHROMMAO, EKKARAT
To: LALLEMAND HUNGARY LIQUIDITY MANAGEMENT LLC
Reel/Frame 075246/0467 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Mar 13, 2026
From: FIRMINO, FERNANDA CRISTINA; HENNINGSEN, BROOKS; PHROMMAO, EKKARAT
To: LALLEMAND HUNGARY LIQUIDITY MANAGEMENT LLC
Reel/Frame 074076/0546 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Mar 13, 2026
From: LALLEMAND INC.
To: LALLEMAND HUNGARY LIQUIDITY MANAGEMENT LLC
Reel/Frame 074076/0586 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Mar 13, 2026
From: BROADBENT, JEFFERY R.; STEELE, JAMES L.
To: LALLEMAND SPECIALTIES INC.
Reel/Frame 074076/0566 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Mar 13, 2026
From: LALLEMAND SPECIALTIES INC.
To: LALLEMAND INC.
Reel/Frame 074076/0569 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Jan 29, 2026
From: LALLEMAND HUNGARY LIQUIDITY MANAGEMENT LLC
To: DANSTAR FERMENT AG
Reel/Frame 073626/0635 →