Methods, systems, and devices for analyzing lung imaging data
Devices, methods, and systems are provided for analyzing lung imaging data. A server computing device receives imaging data of a lung over a network from a client computing device and analyzes the imaging data to identify lung, airways, and blood vessels, segment the lung into lobes, subtract airways, calculate volumes, calculate emphysema scores, identify fissure locations, calculate fissure completeness scores. A reconstruction of the fissures indicating locations where the fissures are incomplete and a report comprising fissure scores, volumes, and emphysema scores are created.
1 . A method for analyzing computerized tomography data of a lung, the method comprising:
receiving, by a server computing device, computerized tomography data of the lung over a network from a client computing device at a different location;
analyzing the computerized tomography data, wherein analyzing the computerized tomography data comprises:
identifying tomography data representing the lung and airways;
segmenting the tomography data into segmented data representing separate lobes;
subtracting from the segmented data a portion of the tomography data representing airways until at least a third generation to produce post third generation data;
calculating volumes of the lobes based on the post third generation data;
calculating emphysema scores for the lobes based on density masks;
identifying locations of fissures based on the post third generation data;
calculating a fissure completeness score for the fissures based on the post third generation data;
creating, based on the post third generation data, a three-dimensional reconstruction of the fissures indicating locations where the fissures are incomplete, wherein a plurality of line types identify a plurality of fissure completeness scores;
creating a report comprising fissure completeness scores, volumes, emphysema scores, and the three-dimensional reconstruction; and
generating a treatment plan comprising a suggested implantable device for placement in an airway feeding a region of interest based on the post third generation data.
2 . The method of claim 1 , wherein the report further comprises a two-dimensional graphical representation of the lung with the lobes identified, wherein the lobes are shaded or colored in the two-dimensional graphical representation to indicate one or more emphysema scores for the lobes.
3 . The method of claim 2 , wherein lines that indicate fissure completeness scores are classified into different fissure completeness score categories with different line types based on the fissure completeness score,
wherein the fissure completeness score categories comprise a high completeness category corresponding to a fissure completeness score greater than a first predetermined value, a low completeness category corresponding to a fissure completeness score less than a second predetermined value, and an intermediate completeness category corresponding to a fissure completeness score between the first and second predetermined values.
4 . The method of claim 1 , wherein the report further comprises a three-dimensional graphical representation of the lung,
wherein the lobes are identified in the three-dimensional graphical representation,
wherein the lobes are shaded or colored in the three-dimensional graphical representation to indicate one or more emphysema scores for the lobes.
5 . The method of claim 4 , wherein the fissures are identified in the three-dimensional graphical representation indicating the fissure completeness scores.
6 . The method of claim 1 , further comprising delivering the report over the network to the client computing device.
7 . The method of claim 1 , wherein the report comprises patient selection information or personalized treatment planning information.
8 . The method of claim 1 , further comprising receiving new anonymized computerized tomography data of the lung by the server computing device over the network after treatment;
analyzing the new anonymized computerized tomography data; and
comparing data representing the lung after treatment to data representing the lung before treatment to determine treatment success.
9 . The method of claim 1 , further comprising determining airway diameters for lobar bronchi, segmental bronchi, and sub-segmental bronchi for each lobe; and
determining a distance from an ostium to a distal carina for the lobar bronchi, segmental bronchi, and sub-segmental bronchi, wherein the report contains the determined airway diameters and distances.
10 . The method of claim 9 , further comprising determining a potential treatment site based at least in part on the post third generation data; and
determining a suggested implantable endobronchial valve based at least in part on the post third generation data, wherein the report comprises the potential treatment site and the suggested implantable endobronchial valve having a diameter and length matching a diameter and distance determined for the potential treatment site.
11 . The method of claim 10 , wherein the report comprises airway navigation information for accessing the potential treatment site, wherein the navigation information comprises turn-by-turn steps for accessing the potential treatment site.
12 . The method of claim 9 , wherein the report comprises a three-dimensional airway model or a two-dimensional image of an entrance to an airway.
13 . The method of claim 1 , wherein analyzing the computerized tomography data further comprises segmenting the segmented data representing the lobes into second segmented data representing separate lung segments;
calculating volumes of the lung segments based on the second segmented data; and
calculating emphysema scores for the lung segments based on density masks, wherein the report comprises volumes and emphysema scores for each lung segment.
14 . The method of claim 13 , wherein analyzing the computerized tomography data further comprises segmenting the second segmented data representing each lung segment into sub-segmented data representing separate lung sub-segments;
calculating volumes of the lung sub-segments based on the sub-segmented data; and
calculating emphysema scores for the lung sub-segments based on density masks, wherein the report comprises volumes and emphysema scores for each lung sub-segment.
15 . The method of claim 14 , further comprising identifying, based on the sub-segmented data, which sub-segments are in contact with one of the locations where a fissure is incomplete,
wherein the report indicates the identified sub-segments in contact with a location where a fissure is incomplete.
16 . The method of claim 15 , wherein the report comprises airway navigation information for accessing the location where the fissure is incomplete.
17 . The method of claim 1 , The method of claim 1 , wherein the implantable device is an endobronchial valve, clip, sealant, or plug.
18 . The method of claim 1 , further comprising determining treatment success based on a comparison of post third generation data representing the lung before treatment to post third generation data representing the lung after treatment.
19 . A method for analyzing computerized tomography data of a lung, the method comprising:
receiving, by a server computing device, computerized tomography data of the lung over a network from a client computing device at a different location;
analyzing the computerized tomography data, wherein analyzing the computerized tomography data comprises:
identifying tomography data representing the lung and airways;
segmenting the tomography data into segmented data representing separate lobes;
subtracting from the segmented data a portion of the tomography data representing airways until at least a third generation to produce post third generation data;
calculating volumes of the lobes based on the post third generation data;
calculating emphysema scores for the lobes based on density masks;
identifying locations of fissures based on the post third generation data;
calculating a fissure completeness score for the fissures based on the post third generation data;
creating, based on the post third generation data, a three-dimensional reconstruction of the fissures indicating locations where the fissures are incomplete, wherein a plurality of line types identify a plurality of fissure completeness scores;
creating a report comprising fissure completeness scores, volumes, emphysema scores, the three-dimensional reconstruction, a region of interest in contact with a location where a fissure is incomplete, a suggested therapeutic agent to be delivered at the region of interest, and a closest airway for treatment of the region of interest with the therapeutic agent, wherein the therapeutic agent is a sealant; and
generating a treatment plan comprising a suggested implantable device for placement in the closest airway for treatment of the region of interest based on the post third generation data.
20 . The method of claim 19 , wherein the report comprises airway navigation information for accessing the region of interest,
wherein the navigation information comprises turn-by-turn steps for accessing the region of interest.
21 . The method of claim 19 , wherein analyzing the computerized tomography data further comprises segmenting the segmented data representing the lobes into second segmented data representing separate lung segments;
calculating volumes of the lung segments based on the second segmented data; and
calculating emphysema scores for the lung segments based on density masks, wherein the report further comprises volumes and emphysema scores for each lung segment and a three-dimensional graphical representation of the lung,
wherein each lung segment and lung sub-segment is identified in the three-dimensional graphical representation,
wherein the lung segments and lung sub-segments are shaded or colored in the three-dimensional graphical representation to indicate one or more emphysema scores for the lung segment or lung sub-segment,
wherein the report contains multiple two-dimensional graphical representations of cross sections of the lung.
22 . The method of claim 19 , wherein the report further comprises placement of the implantable device in an airway feeding the region of interest after the suggested therapeutic agent has been delivered based on the post third generation data.
23 . The method of claim 22 , wherein the implantable device comprises an endobronchial valve.