IP Library Patent Application 18673148
Patent Application
App. No. 18/673,148

FUNCTIONALIZED WELL PLATE, METHODS OF PREPARATION AND USE THEREOF

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Patent No.
US None
App. No.
18/673,148
Abstract

In biosciences and related fields, it can be useful to modify surfaces of apparatuses, devices, and materials that contact biomaterials such as biomolecules and biological micro-objects. Described herein are surface modifying and surface functionalizing reagents, preparation thereof, and methods for modifying surfaces of wells within a well plate to activate lymphocytes, including but not limited to T lymphocytes, in a controllable and reproducible manner.

Claims (31)

1 . (canceled)

2 . A method of activating T lymphocytes (T cells) comprising:

contacting a plurality of T cells with an antigen-presenting covalently functionalized region of a surface of a well plate, wherein the antigen-presenting covalently functionalized region comprises: a plurality of primary activating molecular ligands, each including a major histocompatibility (MHC) molecule configured to bind to a T cell receptor (TCR) of a T cell, wherein each of the plurality of primary activating molecular ligands is linked to the surface; and a plurality of co-activating molecular ligands, each including a T cell receptor (TCR) co-activating molecule or an adjunct TCR activating molecule, wherein each of the co-activating molecular ligands is linked to the surface; and culturing the plurality of T cells in contact with the antigen-presenting covalently functionalized region of the surface, thereby converting at least a portion of the plurality of T cells to activated T cells.

3 . The method of claim 2 , wherein the T cells comprise CD8+ T cells.

4 . The method of claim 2 , wherein the antigen-presenting covalently functionalized region is a first region of a surface of a well plate comprising a plurality of specifically bound primary activating molecular ligands and a plurality of specifically bound co-activating molecular ligands, wherein the first region has an area of 2 mm 2 to 35 mm 2 .

5 . The method of claim 2 , wherein the plurality of co-activating molecular ligands comprises TCR co-activating molecules and adjunct TCR activating molecules.

6 . The method of claim 5 , wherein the ratio of the TCR co-activating molecules to the adjunct TCR activating molecules of the plurality of co-activating molecular ligands is 3:1 to 1:3.

7 . The method of claim 2 , wherein each molecule of the plurality of MHC molecules comprises an MHC Class I protein sequence, a beta microglobulin protein sequence, and an antigenic peptide.

8 . The method of claim 7 , wherein the antigenic peptide is a tumor-associated antigen, a viral antigen, a bacterial antigen, a fungal antigen, or a protozoan antigen.

9 . The method of claim 8 , wherein the antigenic peptide is a tumor-associated antigen, and, wherein the tumor-associated antigen is SLC45A2, TCL1, VCX3A, MART1, or NYESO1.

10 . The method of claim 2 , wherein the T cell receptor (TCR) co-activating molecule includes a CD28 binding protein, or a fragment thereof which retains binding ability to CD28.

11 . The method of claim 2 , wherein the T cell receptor (TCR) co-activating molecule includes a CD80 molecule or a fragment thereof, wherein the fragment retains binding activity to CD28; or wherein the T cell receptor (TCR) co-activating molecule includes an anti-CD28 antibody or a fragment thereof, wherein the fragment retains binding activity to CD28.

12 . The method of claim 2 , wherein the adjunct TCR activating molecule includes a CD2 binding protein, or a fragment thereof which retains binding ability to CD2.

13 . The method of claim 2 , wherein the adjunct TCR activating molecule includes a CD58 molecule or fragment thereof, wherein the fragment retains binding activity with CD2; or wherein the adjunct TCR activating molecule includes an anti-CD2 antibody or a fragment thereof, wherein the fragment retains binding activity with CD2.

14 . The method of claim 2 , wherein the plurality of specifically bound primary activating molecular ligands has a density from 1×10 2 to 1×10 5 molecules per square micron in the antigen-presenting covalently functionalized region of the surface.

15 . The method of claim 2 , wherein the plurality of specifically bound co-activating molecular ligands has a density of 1×10 3 to 1×10 5 molecules per square micron in the antigen-presenting covalently functionalized region of the surface.

16 . The method of claim 2 , wherein a ratio of the primary activating molecular ligands to the co-activating molecular ligands in the antigen-presenting covalently functionalized region of the surface is 1:2 to 1:1.

17 . The method of claim 2 , wherein a ratio of the TCR co-activating molecules to the adjunct TCR activating molecules of the plurality of co-activating molecular ligands is 3:1 to 1:3.

18 . The method of claim 2 , further including contacting the plurality of T cells with a plurality of adhesion-stimulating molecular ligands, wherein the plurality of adhesion-stimulating molecular ligands include an ICAM molecule.

19 . The method of claim 2 , further comprising contacting the plurality of T cells with a plurality of growth stimulatory molecular ligands.

20 . The method of claim 19 , wherein each of the growth stimulatory molecular ligands includes a growth factor receptor ligand.

21 . The method of claim 20 , wherein the growth factor receptor ligand includes IL-21 or a fragment thereof.

22 . The method of claim 19 , wherein the step of contacting with the plurality of growth stimulatory molecular ligands is performed after a first period of culturing of at least one day.

23 . The method of claim 2 , wherein culturing in contact with the antigen-presenting synthetic surface is performed for a period from about four days to about seven days.

24 . The method of claim 2 , wherein the activated T cell is CD45RO+ and/or CD28 positive.

25 . The method of claim 2 , wherein an area of the antigen-presenting functionalized region is less than about 25% of an area of a bottom surface of a well of the well plate.

26 . A method of activating a lymphocyte, comprising:

contacting a plurality of lymphocytes with an activating moiety-presenting covalently functionalized region of a surface of a well plate, wherein the activating moiety-presenting covalently functionalized region comprises a plurality of primary activating molecular ligands linked to the surface; and a plurality of co-activating molecular ligands linked to the surface; and culturing the plurality of lymphocytes, thereby converting at least a portion of the plurality of lymphocytes to activated lymphocytes.

27 . The method of claim 26 , wherein the lymphocytes comprise B cells, T cells, or NK cells.

28 . The method of claim 26 , wherein the activating moiety-presenting covalently functionalized region is a first region of a surface of a well plate comprising a plurality of specifically bound primary activating molecular ligands and a plurality of specifically bound co-activating molecular ligands, wherein the first region has an area of 2 mm 2 to 35 mm 2 .

29 . The method of claim 26 , wherein an area of the activating moiety-presenting functionalized region is less than 25% of an area of a bottom surface of a well of the well plate.

Assignments (4)
MERGER Recorded Apr 10, 2026
From: BRUKER CELLULAR ANALYSIS, INC.
To: BRUKER SPATIAL BIOLOGY, INC.
Reel/Frame 074336/0392 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded May 23, 2024
From: BEEMILLER, PETER J.; MASTROIANNI, ALEXANDER J.; LOWE, RANDALL D., JR.; BRONEVETSKY, YELENA
To: BERKELEY LIGHTS, INC.
Reel/Frame 067514/0041 →
MERGER AND CHANGE OF NAME Recorded May 23, 2024
From: PHENOMEX INC.; BIRD MERGERSUB CORPORATION
To: BRUKER CELLULAR ANALYSIS, INC.
Reel/Frame 067514/0170 →
CHANGE OF NAME Recorded May 23, 2024
From: BERKELEY LIGHTS, INC.
To: PHENOMEX INC.
Reel/Frame 067528/0090 →