IP Library Granted Patent US 12,516,316
Granted Patent B2
US 12,516,316 · App. 18/750,621 · Granted Jan 6, 2026

High fidelity restriction endonucleases

Inventors: Zhenyu Zhu (Beverly, MA); Aine Quimby (Newton, NH); Shuang-Yong Xu (Lexington, MA); Shengxi Guan (Stoneham, MA); Hua Wei (Ipswich, MA); Penghua Zhang (Lexington, MA); Dapeng Sun (Arlington, MA); Siu-Hong Chan (Ipswich, MA)
Assignee: New England Biolabs, Inc.
C12N15/1058C12N9/16C12N9/22C12N15/1034C12N15/1086
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Quick Facts
Patent No.
US 12,516,316
App. No.
18/750,621
Granted
Jan 6, 2026
Kind
B2
Abstract

Compositions and methods are provided for enzymes with altered properties that involve a systematic approach to mutagenesis and a screening assay that permits selection of the desired proteins. Embodiments of the method are particularly suited for modifying specific properties of restriction endonucleases such as star activity. The compositions includes restriction endonucleases with reduced star activity as defined by an overall fidelity index improvement factor.

Claims (4)

1 . A composition comprising a variant SbfI restriction endonuclease having reduced star activity, when compared to the wildtype enzyme, wherein the variant SbfI restriction endonuclease comprises an amino acid sequence that differs from the amino acid sequence of the parent SbfI restriction endonuclease by having a substitution at a position corresponding to 251 in SEQ ID NO: 96.

2 . A composition according to claim 1 , wherein the substitution corresponding to position 251 is K251A.

3 . A composition comprising a variant Sbf1 restriction endonuclease, wherein the amino acid sequence of the variant Sbf1 restriction endonuclease is identical to the wild type Sbf1 restriction endonuclease except for an amino acid substitution at position 251 of the wild type Sbf1 restriction endonuclease.

4 . The composition of claim 3 , wherein the amino acid substitution is K251A.

Assignments (2)
SECURITY INTEREST Recorded May 29, 2026
From: NEW ENGLAND BIOLABS, INC.
To: BANK OF AMERICA, N.A., AS ADMINISTRATIVE AGENT
Reel/Frame 074795/0566 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Jul 25, 2024
From: ZHU, ZHENYU; BLANCHARD, AINE; XU, SHUANG-YONG; GUAN, SHENGXI; WEI, HUA; ZHANG, PENGHUA; SUN, DAPENG; CHAN, SIU-HONG
To: NEW ENGLAND BIOLABS, INC.
Reel/Frame 068150/0218 →
Continuity (9)
Division 17227799 · Apr 12, 2021
Division 16567332 · Sep 11, 2019
Division 15882603 · Jan 29, 2018
Division 14972844 · Dec 17, 2015
Division 13736406 · Jan 8, 2013
Division 12172963 · Jul 14, 2008
Division 12172963 · Jul 14, 2008
Provisional Application 60959203 · Jul 12, 2007
Related Publication 20240352447A1 · Oct 24, 2024
References Cited (33)
US 5663067A · Xu et al. · 1997 [cited by applicant]
US 6723546B2 · Zhu et al. · 2004 [cited by applicant]
US 8372619B2 · Zhu et al. · 2013 [cited by applicant]
US 20050158834A1 · Xu et al. · 2005 [cited by applicant]
US 20090029376A1 · Zhu et al. · 2009 [cited by applicant]
WO WO2007097778A2 · 2007 [cited by applicant]
WO WO2009009797A2 · 2009 [cited by examiner]
Witkowski et al. (Biochemistry 38:11643-11650, 1999) (Year: 1999). [cited by examiner]
Tang et al. (Phil Trans R Soc B 368:20120318, 1-10, 2013) (Year: 2013). [cited by examiner]
Seffernick et al. (J. Bacteriol. 183(8):2405-2410, 2001) (Year: 2001). [cited by examiner]
Sadowski et al. (Current Opinion in Structural Biology 19:357-362, 2009) (Year: 2009). [cited by examiner]
McKane et al Genetics 139 35-43 1993. [cited by applicant]
Danna et al PNAS 68 2913-2917 1971. [cited by applicant]
Nasri et al NAR 14 811-821 1986. [cited by applicant]
New England Biolabs Catalog and Technical Reference Oct. 2009. [cited by applicant]
Velculescu et al Science 270 484-487 1995. [cited by applicant]
Roberts et al NAR 31 1805-1812 2003. [cited by applicant]
Heitman Genet Eng 15 57-108 1993. [cited by applicant]
Roberts PNAS 102 5905-5908 2005. [cited by applicant]
Raleigh et al Bac Genomes Phys Struct Analysis 78-92 1998. [cited by applicant]
Roberts et al NAR 33 D230-232 2005. [cited by applicant]
Kelly et al JMB 51 393-409 1970. [cited by applicant]
Polisky et al PNAS 72 3310-3314 1975. [cited by applicant]
Walker et al PNAS 89 392-396 1992. [cited by applicant]
Arber Science 205 361-365 1979. [cited by applicant]
Carlson et al Mol Microbiol 27 671-676 1998. [cited by applicant]
Zhu et al J. Mol. Biol 337 573-583, 2004. [cited by applicant]
Genbank Accession No. AAR96018.1. [cited by applicant]
Branden et al Introduction to Protein Structure, 247, 1991. [cited by applicant]
Sadowski et al Current Opinion in Structural Biology 19 357-362 2009. [cited by applicant]
Seffernick et al Journal of Bacteriology 183 8 2405-2410 2001. [cited by applicant]
Tang et al Advanced Materials Research 602 1309-1312 2012. [cited by applicant]
Witkowski et al Biochemistry 38 11643-11650 1999. [cited by applicant]