IP Library Granted Patent US 8,073,639
Granted Patent B2
US 8,073,639 · App. 12/200,636 · Granted Dec 6, 2011

Method for identifying a convolved peak

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Quick Facts
Patent No.
US 8,073,639
App. No.
12/200,636
Granted
Dec 6, 2011
Kind
B2
Abstract

A method for identifying a convolved peak is described. A plurality of spectra is obtained. A multivariate analysis technique is used to assign data points from the plurality of spectra to a plurality of groups. A peak is selected from the plurality of spectra. If the peak includes data points assigned to two or more groups of the plurality of groups, the peak is identified as a convolved peak. Principal component analysis is one multivariate analysis technique that is used to assign data points. A number of principal components are selected. A subset principal component space is created. A data point in the subset principal component space is selected. A vector is extended from the origin of the subset principal component space to the data point. One or more data points within a spatial angle around the vector are assigned to a group.

Claims (51)

1. A method for identifying a convolved peak, comprising:

obtaining a plurality of spectra, wherein each spectrum of the plurality of spectra represents measurements from one or more samples;

using a multivariate analysis technique that identifies two or more sets of correlated data points from the plurality of spectra and assigns each set of correlated data points to a group producing a plurality of groups;

selecting a peak from the plurality of spectra; and

if the peak comprises data points assigned to two or more groups of the plurality of groups, identifying the peak as a convolved peak.

2. The method of claim 1 , wherein obtaining the plurality of spectra comprises obtaining the plurality of spectra from a plurality of samples.

3. The method of claim 1 , wherein obtaining the plurality of spectra comprises obtaining the plurality of spectra from a single sample.

4. The method of claim 1 , wherein the obtaining the plurality of spectra comprises performing mass spectrometry.

5. The method of claim 1 , wherein the obtaining the plurality of spectra comprises performing nuclear magnetic resonance.

6. The method of claim 1 , wherein the obtaining the plurality of spectra comprises performing spectroscopy.

7. The method of claim 1 , wherein the multivariate analysis technique comprises an unsupervised clustering algorithm.

8. The method of claim 7 , wherein the unsupervised clustering algorithm comprises a self-organizing map.

9. The method of claim 7 , wherein the unsupervised clustering algorithm comprises a k-means clustering algorithm.

10. The method of claim 7 , wherein the unsupervised clustering algorithm comprises a hierarchical clustering algorithm.

11. The method of claim 7 , wherein the unsupervised clustering algorithm comprises principal component analysis.

12. The method of claim 11 , wherein the unsupervised clustering algorithm further comprises

selecting a number of principal components produced by the principal component analysis,

creating a subset principal component space having the number of principal components,

selecting a data point in the subset principal component space,

extending a vector from an origin of the subset principal component space to the data point,

identifying one or more data points in the subset principal component space and within a spatial angle around the vector as a group of correlated data points, and

assigning the group of correlated data points to the plurality of groups.

13. The method of claim 1 , further comprising processing one or more groups of the two or more groups to obtain information about a component of the peak.

14. The method of claim 13 , wherein the information comprises intensity data.

15. The method of claim 13 , wherein the information comprises mass data.

16. The method of claim 13 , wherein the information comprises chemical shift data.

17. The method of claim 13 , wherein the information comprises wavelength data.

18. The method of claim 1 , wherein obtaining the plurality of spectra comprises liquid chromatography mass spectrometry analysis.

19. The method of claim 1 , wherein obtaining the plurality of spectra comprises gas chromatography mass spectrometry analysis.

20. The method of claim 1 , wherein obtaining the plurality of spectra comprises capillary electrophoresis mass spectrometry analysis.

21. The method of claim 1 , wherein obtaining the plurality of spectra comprises super-critical fluid chromatography mass spectrometry analysis.

22. The method of claim 1 , wherein obtaining the plurality of spectra comprises ion mobility mass spectrometry analysis.

23. The method of claim 1 , wherein obtaining the plurality of spectra comprises obtaining the plurality of spectra from field asymmetric ion mobility mass spectrometry analysis.

24. The method of claim 1 , wherein obtaining the plurality of spectra comprises liquid chromatography nuclear magnetic resonance analysis.

25. The method of claim 1 , wherein obtaining the plurality of spectra comprises liquid chromatography ultraviolet spectroscopic analysis.

26. The method of claim 1 , wherein obtaining the plurality of spectra comprises gas chromatography infrared spectroscopic analysis.

27. The method of claim 1 , wherein obtaining the plurality of spectra comprises spatial analysis.

28. A non-transitory computer-readable storage medium whose contents include a program with instructions being executed on a processor so as to realize a method for identifying a convolved peak, the instructions comprising:

obtaining a plurality of spectra, wherein each spectrum of the plurality of spectra represents measurements from one or more samples;

using a multivariate analysis technique that identifies two or more sets of correlated data points from the plurality of spectra and assigns each set of correlated data points to a group producing a plurality of groups;

selecting a peak from the plurality of spectra; and

if the peak comprises data points assigned to two or more groups of the plurality of groups, identifying the peak as a convolved peak.

29. A system for identifying a convolved peak, comprising:

a measurement device that obtains a plurality of spectra, wherein each spectrum of the plurality of spectra represents measurements from one or more samples;

a memory on which instructions are stored; and

a processor that reads the instructions from the memory and executes the instructions, the instructions comprising

using a multivariate analysis technique that identifies two or more sets of correlated data points from the plurality of spectra and assigns each set of correlated data points to a group producing a plurality of groups;

selecting a peak from the plurality of spectra, and

if the peak comprises data points assigned to two or more groups of the plurality of groups, identifying the peak as a convolved peak.

30. The system of claim 29 , wherein the measurement device comprises a spectrometer.

31. The system of claim 29 , wherein the measurement device comprises a mass spectrometer.

Assignments (7)
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Apr 13, 2010
From: APPLIED BIOSYSTEMS (CANADA) LIMITED
To: DH TECHNOLOGIES DEVELOPMENT PTE. LTD.
Reel/Frame 024225/0092 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Apr 12, 2010
From: MDS INC.
To: DH TECHNOLOGIES DEVELOPMENT PTE. LTD.
Reel/Frame 024218/0603 →
RELEASE OF SECURITY INTEREST Recorded Mar 31, 2010
From: BANK OF AMERICA, N.A.
To: APPLIED BIOSYSTEMS, LLC
Reel/Frame 024160/0955 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Jan 27, 2010
From: BONNER, RONALD; IVOSEV, GORDANA
To: MDS ANALYTICAL TECHNOLOGIES, A BUSINESS UNIT OF MDS INC.; APPLIED BIOSYSTEMS (CANADA) LIMITED
Reel/Frame 023856/0985 →
CHANGE OF NAME Recorded Nov 26, 2009
From: APPLERA CORPORATION
To: APPLIED BIOSYSTEMS INC.
Reel/Frame 023573/0397 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Nov 26, 2009
From: APPLIED BIOSYSTEMS, LLC
To: APPLIED BIOSYSTEMS (CANADA) LIMITED
Reel/Frame 023575/0813 →
MERGER Recorded Nov 26, 2009
From: APPLIED BIOSYSTEMS INC.
To: APPLIED BIOSYSTEMS, LLC
Reel/Frame 023573/0404 →