IP Library Granted Patent US 11,325,921
Granted Patent B2
US 11,325,921 · App. 17/042,479 · Granted May 10, 2022

Optically active crosslinked cyclic secondary amine derivative

Inventors: Seiji Kamioka (Toyonaka, JP); Naoaki Shimada (Takatsuki, JP); Wataru Hirose (Suita, JP); Hitoshi Ban (Nishinomiya, JP); Akihiko Yokoyama (Tsuruoka, JP)
Assignee: Sumitomo Dainippon Pharma Co., Ltd.
C07D519/00A61K45/06
View Patent ↗
Loading inventors, assignments & file history…
Monitor This Case
Get email alerts when status or documents change.
Order Certified Copies
Most orders are placed with the USPTO same day — all within 24 business hours.
Order via The Patent Place →
Pre-filled with this patent's details
Quick Facts
Patent No.
US 11,325,921
App. No.
17/042,479
Granted
May 10, 2022
Kind
B2
Abstract

The present invention relates to the compound of formula (I) wherein p is 1 or 2, R 1 is —CF 3 or the like, R 2a , R 2b , R 3a , and R 3b are hydrogen atom or the like, X is —C(═O)—or the like, or a pharmaceutically acceptable salt thereof, which has an antitumor effect by inhibiting the binding between a MLL fusion protein that is infused with AF4, AF9, or the like, which is a representative fusion partner gene causing MLL leukemia, and menin.

Claims (73)

1. A compound of formula (1):

or a pharmaceutically acceptable salt thereof, wherein

p is 1 or 2,

R 1 is —CF 3 , —CHF 2 , or cyano,

R 2a , R 2b , R 3a , and R 3b are each independently hydrogen atom, halogen atom, C 1-6 alkyl, C 2-6 alkenyl, C 2-6 alkynyl, C 3-10 cycloalkyl, —OR 4 , 3- to 10-membered saturated heterocyclyl, C 6-10 aryl, or 5- to 12-membered heteroaryl (wherein the alkyl may be substituted with 1-3 fluorine atoms; the cycloalkyl and the saturated heterocyclyl are each independently substituted with the same or different 1-5 substituents selected from the group consisting of fluorine atom and C 1-3 alkyl; and the aryl and the heteroaryl are each independently substituted with the same or different 1-5 substituents selected from the group consisting of fluorine atom, chlorine atom, bromine atom, and C 1-3 alkyl); or R 2a and R 2b may be combined together to form ═O, and R 3a and R 3b may be combined together to form ═O,

R 4 is, each independently if there are plural, hydrogen atom, C 1-6 alkyl, C 2-6 alkenyl, C 2-6 alkynyl, C 3-10 cycloalkyl, 3- to 10-membered saturated heterocyclyl, C 6-10 aryl, or 5- to 12-membered heteroaryl (wherein the alkyl may be substituted with the same or different 1-5 substituents selected from the group consisting of C 3-10 cycloalkyl, 3- to 10-membered saturated heterocyclyl, C 6-10 aryl, and 5- to 12-membered heteroaryl; the cycloalkyl and the saturated heterocyclyl may be each independently substituted with the same or different 1-5 substituents selected from the group consisting of fluorine atom and C 1-3 alkyl; and the aryl and the heteroaryl may be each independently substituted with the same or different 1-5 substituents selected from the group consisting of fluorine atom, chlorine atom, bromine atom, and C 1-3 alkyl), and

X is C(═O)— or C 1-6 alkylene.

2. The compound of claim 1 or a pharmaceutically acceptable salt thereof, wherein X is —C(═O)—, and R 1 is —CF 3 .

3. The compound of claim 1 or a pharmaceutically acceptable salt thereof, wherein

R 2a , R 2b , R 3a , and R 3b are each independently hydrogen atom, fluorine atom, C 1-6 alkyl, or —OR 4 ; or R 2a and R 2b may be combined together to form ═0, and R 3a and R 3b may be combined together to form ═0, and

R 4 is, each independently if there are plural, hydrogen atom, C 2-6 alkenyl, or C 1-6 alkyl (wherein the alkyl may be substituted with C 6-10 aryl).

4. The compound of claim 1 or a pharmaceutically acceptable salt thereof, wherein formula (1) is the following formula (1-A):

wherein

p is 1 or 2,

R 2a and R 2b are each independently hydrogen atom, fluorine atom, or —OR 4 ,

R 3a and R 3b are each independently hydrogen atom or fluorine atom, or R 3a and R 3b may be combined together to form ═0, and

R 4 is, each independently if there are plural, hydrogen atom, C 2-4 alkenyl, or C 1-3 alkyl (wherein the alkyl may be substituted with phenyl).

5. The compound of claim 1 or a pharmaceutically acceptable salt thereof, wherein

R 2a and R 2b are hydrogen atom, and

R 3a and R 3b are each independently hydrogen atom or fluorine atom.

6. The compound of claim 1 or a pharmaceutically acceptable salt thereof, wherein R 3a is hydrogen atom, and R 3b is fluorine atom.

7. The compound of claim 1 or a pharmaceutically acceptable salt thereof, wherein the compound is selected from the following:

{(1S,3S,4S,5S)-5-fluoro-2-azabicyclo[2.2.2]octan-3-yl}{6-[2- (2,2,2-trifluoroethyl)-5-(trifluoromethyl)thieno[2,3-b]pyridin-4-yl]-2,6-diazaspiro [3.3]heptan-2-yl}methanone,

[(1R,3S,4S)-2-azabicyclo [2.2.1]heptan-3-yl]{6-[2-(2,2,2-trifluoroethyl)-5-(trifluoromethyl)thieno[2,3-b]pyridin-4-yl]-2,6-diazaspiro[3.3]heptan-2-yl}methanone,

[(3S)-2-azabicyclo[2.2.2]octan-3-yl]{6-[2-(2,2,2-trifluoroethyl)-5-(trifluoromethyl)thieno[2,3-b]pyridin-4-yl]-2,6-diazaspiro[3.3]heptan-2-yl}methanone,

[(1S,3S,4S)-5, 5-difluoro-2-azabicyclo[2.2.2]octan-3-yl]{6-[2(2,2,2-trifluoroethyl)-5-(trifluoromethyl)thieno[2, 3-b]pyridin-4-yl]-2,6-diazaspiro [3.3]heptan-2-yl)methanone,

[1S,3S,4R,6S)-6-hydroxy-2-azabicyclo [2.2.2]octan-3-yl]{6-[2-(2,2,2-trifluoroethyl)-5-(trifluoromethyl)thieno[2,3-b]pyridin-4-yl]-2, 6-diazaspiro [3.3]heptan-2-yl}methanone,

(1S,3S,4S)-3-{6-[2-(2,2,2-trifluoroethyl)-5-(trifluoromethyl)thieno[2,3-b]pyridin-4-yl]-2,6-diazaspiro[3.3]heptane-2-carbonyl}-2-azabicyclo[2.2.2]octan-5-one,

[(1S,3S,4S,5S)-5-fluoro-2-azabicyclo[2.2.1]heptan-3-yl]{6[2-(2,2,2-trifluoroethyl)-5-(trifluoromethyl)thieno[2,3-b]pyridin-4-yl]-2,6-diazaspiro [3.3]heptan-2-yl}methanone,

[(1S,3S,4R,6R)-6-fluoro-2-azabicyclo[2.2.2]octan-3-yl]{6[2-(2,2,2-trifluoroethyl)-5-(trifluoromethyl)thieno[2,3-b]pyridin-4-yl]-2,6-diazaspiro [3.3]heptan-2-yl}methanone,

{(1S,3S,4R,6S)-6-[(prop-2-en-1-yl)oxy]-2-azabicyclo[2.2.2]octan-3-yl}{6-[2-(2,2,2-trifluoroethyl)-5-(trifluoromethyl)thieno[2,3-b]pyridin-4-yl]-2,6-diazaspiro[3.3]heptan-2-yl}methanone,

[(1S,3S,4R,6S)-6-(benzyloxy)-2-azabicyclo [2.2.2]octan-3-yl]}6-[2-(2,2,2-trifluoroethyl)-5-(trifluoromethyl)thieno[2,3-b]pyridin-4-yl]-2,6-diazaspiro [3.3]heptan-2-yl}methanone,

4-{6-[3S)-2-azabicyclo[2.2.2]octane-3-carbonyl]-2,6-diazaspiro[3.3]heptan-2-yl}-2-(2,2,2-trifluoroethyl)thieno[2,3-b]pyridine-5-carbonitrile,

4-{6-[(1R,3S,4S)-2-azabicyclo[2.2.1]heptane-3-carbonyl]-2,6-diazaspiro[3.3]heptan-2-yl}-2-(2,2,2-trifluoroethyl)thieno[2,3-b]pyridine-5-carbonitrile,

4-{6-[(1S,3S,4S,5S)-5-fluoro-2-azabicyclo[2.2.2]octane-3-carbonyl]-2,6-diazaspiro[3.3]heptan-2-yl}-2-(2,2,2-trifluoroethyl)thieno[2,3-b]pyridine-5-carbonitrile,

4-{6-[(1S,3S,4S)-5,5-difluoro-2-azabicyclo[2.2.2]octane-3-carbonyl]-2,6-diazaspiro[3.3]heptan-2-yl{-2-(2,2,2-trifluoroethyl)thieno[2,3-b]pyridine-5-carbonitrile,

4-{6-[(1S,3S,4S)-5-oxo-2-azabicyclo[2.2.2]octane-3-carbonyl]-2,6-diazaspiro[3.3]heptan-2-yl-2-(2,2,2-trifluoroethyl)thieno[2,3-b]pyridine-5-carbonitrile,

[(3S)-2-azabicyclo[2.2.2]octan-3-yl]{6-[5-(difluoromethyl)-2-(2,2,2-trifluoroethyl)thieno[2,3-b]pyridin-4-yl]-2,6-diazaspiro[3.3]heptan-2-yl}methanone, and

[(1R,3S 4S)-2-azabicyclo [2.2.1]heptan-3-yl]{6-[5-(difluoromethyl)-2-(2,2,2-trifluoroethyl)thieno [2,3-b]pyridin-4-yl]-2, 6-diazaspiro [3.3]heptan-2-yl}methanone.

8. The compound of claim 1 or a pharmaceutically acceptable salt thereof, wherein the compound is selected from the following:

{(1S,3S,4S,5S)-5-fluoro-2-azabicyclo[2.2.2]octan-3-yl}{6(2,2,2-trifluoroethyl)-5-(trifluoromethyl)thieno[2,3-b]pyridin-4-yl]-2,6-diazaspiro [3.3]heptan-2-yl}methanone,

[(1R,3S,4S)-2-azabicyclo [2.2.1]heptan-3-yl]{6-[2-(2,2,2-trifluoroethyl)-5-(trifluoromethyl)thieno[2,3-b]pyridin-4-yl]-2,6-diazaspiro[3.3]heptan-2-yl}methanone,

[(3S)-2-azabicyclo[2.2.2]octan-3-yl]}6-[2-(2,2,2-trifluoroethyl)-5-(trifluoromethyl)thieno[2,3-b]pyridin-4-yl]-2,6-diazaspiro[3.3]heptan-2-yl}methanone,

[(1S,3S,4S)-5,5-difluoro-2-azabicyclo[2.2.2]octan-3-yl]{6-[2(2,2,2-trifluoroethyl)-5-(trifluoromethyl)thieno[2,3-b]pyridin-4-yl]-2,6-diazaspiro [3.3]heptan-2-yl}methanone,

[1S,3S,4R,6S)-6-hydroxy-2-azabicyclo [2.2.2]octan-3-yl]{6-[2-(2,2,2-trifluoroethyl)-5-(trifluoromethyl)thieno[2,3-b]pyridin-4-yl]-2,6-diazaspiro [3.3]heptan-2-yl}methanone,

(1S,3S,4S)-3-{6-[2-(2,2,2-trifluoroethyl)-5-(trifluoromethyl)thieno[2,3-b]pyridin-4-yl]-2,6-diazaspiro[3.3]heptane-2-carbonyl}-2-azabicyclo[2.2.2]octan-5-one,

[(1S,3S,4S,5S)-5-fluoro-2-azabicyclo[2.2.1]heptan-3-yl]{6-[2-(2,2,2-trifluoroethyl)-5-(trifluoromethyl)thieno[2,3-b]pyridin-4-yl]-2,6-diazaspiro [3.3]heptan-2-yl}methanone,

[(1S,3S,4R,6R)-6-fluoro-2-azabicyclo[2.2.2]octan-3-yl]{6-[2-(2,2,2-trifluoroethyl)-5-(trifluoromethyl)thieno[2,3-b]pyridin-4-yl]-2,6-diazaspiro [3.3]heptan-2-yl}methanone,

{(1S,3S,4R,6S)-6-[(prop-2-en-1-yl)oxy]-2-azabicyclo[2.2.2]octan-3-yl}{6-[2-(2,2,2-trifluoroethyl)-5-(trifluoromethyl)thieno[2,3-b]pyridin-4-yl]-2,6-diazaspiro[3.3]heptan-2-yl}methanone, and

[(1S,3S,4R,6S)-6-(benzyloxy)-2-azabicyclo[2.2.2]octan-3-yl]}6-[2-(2,2,2-trifluoroethyl)-5-(trifluoromethyl)thieno[2,3-b]pyridin-4-yl]-2,6-diazaspiro[3.3]heptan-2-yl}methanone.

9. The compound of claim 1 or a pharmaceutically acceptable salt thereof, wherein the compound is selected from the following:

{(1S,3S,4S,5S)-5-fluoro-2-azabicyclo[2.2.2]octan-3-yl}{6-[2-(2,2,2-trifluoroethyl)-5-(trifluoromethyl)thieno[2,3-b]pyridin-4-yl]-2,6-diazaspiro[3.3]heptan-2-yl}methanone,

[(1R,3S,4S)-2-azabicyclo [2.2.1]heptan-3-yl]{6-[2-(2,2,2-trifluoroethyl)-5-(trifluoromethyl)thieno[2,3-b]pyridin-4-yl]-2,6-diazaspiro[3.3]heptan-2-yl}methanone,

[(3S)-2-azabicyclo[2.2.2]octan-3-yl]{6-[2-(2,2,2-trifluoroethyl)-5-(trifluoromethyl)thieno[2,3-b]pyridin-4-yl]-2,6-diazaspiro[3.3]heptan-2-yl}methanone, and

[(1S,3S,4S,5S)-5-fluoro-2-azabicyclo[2.2.1]heptan-3-yl]{6-[2-(2,2,2-trifluoroethyl)-5-(trifluoromethyl)thieno [2,3-b]pyridin-4-yl]-2,6-diazaspiro[3.3]heptan-2-yl}methanone.

10. The compound of claim 1 or a pharmaceutically acceptable salt thereof, wherein the compound is the following:

}(1S,3S,4S,5S)-5-fluoro-2-azabicyclo[2.2.2]octan-3-yl}{6-[2-(2,2,2-trifluoroethyl)-5-(trifluoromethyl)thieno [2,3-b]pyridin-4-yl]-2,6-diazaspiro[3.3]heptan-2-yl}methanone.

11. The compound of claim 1 or a pharmaceutically acceptable salt thereof, wherein the compound is the following:

[(1R,3S,4S)-2-azabicyclo [2.2.1]heptan-3-yl]{6-[2-(2,2,2-trifluoroethyl)-5-(trifluoromethyl)thieno[2,3-b]pyridin-4-yl]-2,6-diazaspiro[3.3]heptan-2-yl methanone.

12. The compound of claim 1 or a pharmaceutically acceptable salt thereof, wherein the compound is the following:

[(3S)-2-azabicyclo[2.2.2]octan-3-yl]{6-[2-(2,2,2-trifluoroethyl)-5-(trifluoromethyl)thieno[2,3-b]pyridin-4-yl]-2,6-diazaspiro[3.3]heptan-2-yl}methanone.

13. The compound of claim 1 or a pharmaceutically acceptable salt thereof, wherein the compound is the following:

[(1S,3S,4S,5S)-5-fluoro-2-azabicyclo[2.2.1]{heptan-3-yl]{6-[2-(2,2,2-trifluoroethyl)-5-(trifluoromethyl)thieno[2,3-b]pyridin-4-yl]-2,6-diazaspiro[3.3]heptan-2-yl}methanone.

14. A pharmaceutical composition comprising the compound of claim 1 or a pharmaceutically acceptable salt thereof.

15. A pharmaceutical composition comprising the compound of claim 1 or a pharmaceutically acceptable salt thereof in combination with at least one compound selected from the group consisting of an anticancer alkylating agent, an anticancer antimetabolite, an anticancer antibiotic, a plant-derived anticancer medicament, an anticancer platinum complex compound, an anticancer camptothecin derivative, an anticancer tyrosine kinase inhibitor, an anticancer serine/threonine kinase inhibitor, an anticancer phospholipid kinase inhibitor, an anticancer monoclonal antibody, interferon, a biological response modifier, a hormone preparation, an angiogenic inhibitor, an immune checkpoint inhibitor, an epigenetics-associated molecular inhibitor, a protein post-translational modification inhibitor, a proteasome inhibitor, and other anticancer medicaments.

16. A method of treating a tumor associated with menin-MLL interaction comprising administering a compound of claim 1 or a pharmaceutically acceptable salt thereof.

17. The method of claim 16 , wherein the tumor is acute leukemia (including MLL acute leukemia, MLL partial tandem duplicate acute leukemia, NPM mutated acute leukemia, MOZ acute leukemia, NUP98 acute leukemia, and CALM acute leukemia), chronic lymphocytic leukemia, chronic myeloid leukemia, myelodysplastic syndrome, polycythemia vera, malignant lymphoma (including B-cell lymphoma), myeloma (including multiple myeloma), brain tumor, cancer of the head and neck, esophageal cancer, thyroid cancer, small cell lung cancer, non-small cell lung cancer, breast cancer, gastric cancer, gallbladder and bile duct cancer, liver cancer, hepatocellular cancer, pancreatic cancer, colon cancer, rectal cancer, anal cancer, chorionepithelioma, endometrial cancer, cervical cancer, ovarian cancer, bladder cancer, urothelial cancer, renal cancer, renal cell cancer, prostate cancer, testicular tumor, testicular germ cell tumor, ovarian germ cell tumor, Wilms’ tumor, malignant melanoma, neuroblastoma, osteosarcoma, Ewing's sarcoma, chondrosarcoma, soft tissue sarcoma, or skin cancer.

18. The method of claim 16 , wherein the tumor is acute leukemia (including MLL acute leukemia, MLL partial tandem duplicate acute leukemia, NPM mutated acute leukemia, MOZ acute leukemia, NUP98 acute leukemia, and CALM acute leukemia), chronic myeloid leukemia, malignant lymphoma (including B-cell lymphoma), myeloma (including multiple myeloma), brain tumor, prostate cancer, breast cancer, neuroblastoma, Ewing's sarcoma, or liver cancer.

19. The method of claim 16 wherein the tumor is MLL acute leukemia, MLL partial tandem duplicate acute leukemia, NPM mutated acute leukemia, MOZ acute leukemia, NUP98 acute leukemia, CALM acute leukemia, chronic myeloid leukemia, B-cell lymphoma, multiple myeloma, neuroblastoma, or prostate cancer.

20. The method of claim 16 wherein the tumor is MLL acute leukemia, or NPM mutated acute leukemia.

21. The method of claim 16 wherein the tumor is accompanied by high expression of HOXa gene cluster, or MEIS gene cluster.

22. The method of claim 16 wherein the tumor is accompanied by p53 gain-of-function mutation.

23. The the method of claim 16 wherein the compound is administered in combination with at least one member selected from the group consisting of from an anticancer alkylating agent, an anticancer antimetabolite, an anticancer antibiotic, a plant-derived anticancer medicament, an anticancer platinum complex compound, an anticancer camptothecin derivative, an anticancer tyrosine kinase inhibitor, an anticancer serine/threonine kinase inhibitor, an anticancer phospholipid kinase inhibitor, an anticancer monoclonal antibody, interferon, a biological response modifier, a hormone preparation, an angiogenic inhibitor, an immune checkpoint inhibitor, an epigenetics-associated molecular inhibitor, a protein post-translational modification inhibitor, a proteasome inhibitor, and other antitumor medicament.

Assignments (2)
CHANGE OF NAME Recorded Jun 10, 2022
From: SUMITOMO DAINIPPON PHARMA CO., LTD.
To: SUMITOMO PHARMA CO., LTD.
Reel/Frame 060161/0046 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Sep 28, 2020
From: KAMIOKA, SEIJI; SHIMADA, NAOAKI; HIROSE, WATARU; BAN, HITOSHI; YOKOYAMA, AKIHIKO
To: SUMITOMO DAINIPPON PHARMA CO., LTD.
Reel/Frame 053902/0666 →
Cited By (1)
US 12,662,494