IP Library Granted Patent US 7,052,849
Granted Patent B2
US 7,052,849 · App. 09/991,627 · Granted May 30, 2006

Protein biopolymer markers predictive of insulin resistance

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Quick Facts
Patent No.
US 7,052,849
App. No.
09/991,627
Granted
May 30, 2006
Kind
B2
Abstract

The instant invention involves the use of a combination of preparatory steps in conjunction with mass spectroscopy and time-of-flight detection procedures to maximize the diversity of biopolymers which are verifiable within a particular sample. The cohort of biopolymers verified within such a sample is then viewed with reference to their ability to evidence at least one particular disease state; thereby enabling a diagnostician to gain the ability to characterize either the presence or absence of at least one disease state relative to recognition of the presence and/or the absence of the biopolymer, predict disease risk assessment, and develop therapeutic avenues against the disease.

Claims (13)

1. An isolated biopolymer marker peptide consisting of SEQ ID NO: 2.

2. A method for determining the presence of an isolated biopolymer marker consisting of SEQ ID NO: 2 comprising:

(a) obtaining a sample from a patient;

(b) conducting mass spectrometric analysis on said sample to elucidate peptide fragments contained therein and comparing mass spectrum profiles of said isolated biopolymer marker consisting of SEQ ID NO:2 to mass spectrum profiles of peptides obtained and analyzed for said sample; and

(c) confirming the presence of said isolated biopolymer marker consisting of SEQ ID NO:2 in said sample displaying a peak profile at about 1189 daltons in said mass spectrum profile;

wherein the presence of said isolated biopolymer marker consisting of SEQ ID NO:2 is indicative of a link to insulin resistance.

3. The method of claim 2 , wherein said sample is an unfractionated body fluid or a tissue sample.

4. The method of claim 2 , wherein said sample is selected from the group consisting of blood, blood products, urine, saliva, cerebrospinal fluid, and lymph.

5. The method of claim 2 , wherein said mass spectrometric analysis is selected from the group consisting of Surface Enhanced Laser Desorption Ionization (SELDI) mass spectrometry (MS), Matrix-Assisted Laser Desorption/Quadrupole quadrupole Time-Of-Flight (MALDI-Og-TOF) Mass Spectrometry, Multiple Sequential Mass Spectrometry (MS/MS), Multiple Sequential Time-Of-Flight/Time-Of-Flight Mass Spectrometry (TOF-TOF) Electrospray Ionization/Ionization Time-Of-Flight Mass Spectrometry (ESI-O-TOF) and ION-TRAP Mass Spectrometry.

6. The method of claim 2 , wherein said patient is a human.

7. An insulin resistance diagnostic kit comprising: (a) an isolated biopolymer marker peptide selected from the group consisting of SEQ ID NO: 2 and (b) an antibody that binds to said isolated biopolymer marker peptide in a sample from a patient.

8. The insulin resistance diagnostic kit of claim 7 , wherein said antibody is immobilized on a solid support.

9. The insulin resistance diagnostic kit of claim 7 , wherein said antibody is labeled.

Assignments (8)
GRANT OF SECURITY INTEREST Recorded Jul 25, 2008
From: NANOGEN, INC.
To: PORTSIDE GROWTH & OPPORTUNITY FUND, AS COLLATERAL AGENT
Reel/Frame 021291/0605 →
RELEASE OF SECURITY INTEREST Recorded Apr 17, 2008
From: NANOGEN POINT OF CARE, INC.
To: NANOGEN, INC.
Reel/Frame 020826/0087 →
ASSIGNMENT OF INTELLECTUAL PROPERTY SECURITY AGREEMENT Recorded Apr 15, 2008
From: THE CANADA TRUST COMPANY
To: NANOGEN, INC.
Reel/Frame 020807/0247 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Aug 31, 2006
From: NANOGEN POINT OF CARE INC.
To: NANOGEN INC.
Reel/Frame 018194/0399 →
CHANGE OF NAME Recorded Jul 3, 2006
From: SYN X PHARMA INC.
To: NANOGEN POINT OF CARE INC.
Reel/Frame 017882/0607 →
SECURITY INTEREST Recorded Feb 12, 2004
From: SYNX PHARMA INC.
To: NANOGEN, INC.
Reel/Frame 014337/0010 →
SECURITY AGREEMENT Recorded Jul 18, 2003
From: SYNX PHARMA INC.
To: CANADA TRUST COMPANY, THE
Reel/Frame 014242/0790 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Feb 13, 2002
From: JACKOWSKI, GEORGE; MARSHALL, JOHN
To: SYN X PHARMA
Reel/Frame 012622/0289 →