IP Library Patent Application 10706801
Patent Application
App. No. 10/706,801

Interleukin-7 molecules with altered biological properties

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Quick Facts
Patent No.
US None
App. No.
10/706,801
Abstract

The present invention is based, in part, on the discovery that mutating IL-7 in the region of the carboxy terminus, can result in modification of receptor ligand interactions between IL-7 and IL-7 receptor (IL-7R). Compounds that modify such interaction, which are also within the scope of the invention, can be used to treat T-cell-mediated disorders.

Claims (35)

1 . A substantially pure polypeptide comprising an amino acid sequence that is identical to a wild type IL-7 sequence except that one or more amino acid residues in the carboxy-terminal helix D region is mutant.

2 . The polypeptide of claim 1 , wherein the polypeptide comprises a mutation in the region corresponding to amino acid positions 136-144 of SEQ ID NO:1 or in a corresponding region of an IL-7 polypeptide from another species.

3 . The polypeptide of claim 2 , wherein the mutation comprises a deletion of one or more of the amino acids corresponding to positions 136-144 of SEQ ID NO:1 or from a corresponding region of an IL-7 polypeptide from a non-human species.

4 . The polypeptide of claim 2 , wherein the mutation comprises an addition of one or more amino acids corresponding to positions 136-144 of SEQ ID NO:1 or to a corresponding region of an IL-7 polypeptide from a non-human species.

5 . The polypeptide of claim 2 , wherein the mutation comprises a substitution of one or more of the amino acids corresponding to positions 136-144 of SEQ ID NO:1 or in a corresponding region of an IL-7 polypeptide from a non-human species.

6 . The polypeptide of claim 5 , wherein the substitution comprises a non-conservative substitution.

7 . The polypeptide of claim 5 , wherein the substitution comprises substituting a non-aromatic amino acid in place of an aromatic amino acid.

8 . The polypeptide of claim 2 , wherein the mutation comprises a mutation at the position corresponding to position 143 of SEQ ID NO:1.

9 . The polypeptide of claim 8 , wherein the mutation comprises a substitution of the amino acid corresponding to position 143 of SEQ ID NO:1 with alanine or proline.

10 . The polypeptide of claim 8 , wherein the mutation comprises a substitution of the amino acid corresponding to position 143 of SEQ ID NO:1 with histidine or tyrosine.

11 . The polypeptide of claim 5 , wherein the substitution comprises a conservative substitution.

12 . An isolated nucleic acid molecule comprising a sequence encoding a polypeptide of claim 1 .

13 . An expression vector comprising the nucleic acid molecule of claim 12 .

14 . The expression vector of claim 13 , further comprising a sequence that encodes a detectable marker.

15 . The expression vector of claim 14 , wherein the detectable marker is a green fluorescent protein, β-galactosidase, or chloramphenicol acetyl transferase.

16 . The expression vector of claim 14 , wherein the detectable marker is an epitope tag.

17 . A cell comprising the polypeptide of claim 1 .

18 . A cell comprising the nucleic acid molecule of claim 12 .

19 . A cell comprising the expression vector of claim 13 .

20 . An antibody that specifically binds the polypeptide of claim 1 .

21 . A method of treating a patient who has a T cell-mediated disorder, the method comprising administering to a patient a composition comprising a polypeptide of claim 1 , and wherein the amount of the composition administered is sufficient to inhibit the symptoms of the T cell-mediated disorder in the patient.

22 . A method of treating a patient who has a T cell-mediated disorder, the method comprising administering to a patient a composition comprising the nucleic acid molecule of claim 12 , and wherein the amount of the composition administered is sufficient to inhibit the symptoms of the T cell-mediated disorder in the patient.

23 . A method of treating a patient who has a T cell-mediated disorder, the method comprising administering to a patient a composition comprising the expression vector of claim 13 , the amount of the composition administered being sufficient to inhibit the symptoms of the T cell-mediated disorder in the patient.

24 . The method of claim 21 , wherein the T-cell-mediated disorder is a cancer.

25 . The method of claim 21 , wherein the T-cell-mediated disorder is an autoimmune disorder.

26 . The method of claim 21 , wherein the T-cell-mediated disorder is a transplant rejection.

27 . The method of claim 24 , wherein the cancer is a leukemia, a lymphoma, or a myeloma.

28 . The method of claim 24 , wherein the cancer is an acute myelocytic leukemia, an adult acute lymphocytic leukemia, a childhood acute lymphocytic leukemia, a chronic lymphocytic leukemia, a chronic myelocytic leukemia, a hairy cell leukemia, Hodgkins disease, a myelodysplastic syndrome, a non-hodgkins lymphoma, an AIDS-related lymphoma, a cutaneous T-cell lymphoma, a Sezary leukemia, an acute myelogenous leukemia, or a B cell chronic lymphocytic leukemia.

29 . A method of inhibiting the proliferation of a cell that expresses an IL-7 receptor, the method comprising

(a) providing a cell that expresses an IL-7 receptor, and

(b) exposing the cell to a composition comprising the polypeptide of claims 1 , wherein the amount of the composition to which the cell is exposed is sufficient to inhibit the proliferation of the cell.

30 . A method of diagnosing a patient as having a disease or condition that could be treated with a polypeptide of claims 1 , the method comprising determining whether a biological sample obtained from the patient contains cells that are bound by a polypeptide comprising IL-7, the occurrence of binding indicating that the cells can be bound by the polypeptide of any of claims 1 in vivo and thereby inhibited from proliferating in response to wild-type IL-7 in vivo.

31 . The polypeptide of claim 1 , wherein the polypeptide effectively competes with wild type IL-7 for binding to a cell surface receptor.

32 . The polypeptide of claim 1 , wherein the polypeptide further comprises a heterologous sequence.

33 . The polypeptide of claim 32 , wherein the heterologous sequence comprises a sequence that increases the circulating half-life of the IL-7 portion of the polypeptide.

Assignments (4)
EXECUTIVE ORDER 9424, CONFIRMATORY LICENSE Recorded Jul 15, 2008
From: NEW ENGLAND MEDICAL CENTER HOSPITALS
To: NATIONAL INSTITUTES OF HEALTH (NIH), U.S. DEPT. OF HEALTH AND HUMAN SERVICES (DHHS), U.S. GOVERNMENT
Reel/Frame 021237/0075 →
CORRECTIVE ASSIGNMENT SHOWING CONVEYANCE OF FRANCINE M. FOSS ONLY TO NEW ENGLAND MEDICAL CENTER HOSPITALS, INC. Recorded Nov 7, 2005
From: FOSS, FRANCINE M.
To: NEW ENGLAND MEDICAL CENTER HOSPITALS, INC.
Reel/Frame 017191/0541 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Nov 4, 2005
From: COSENZA, LARRY
To: NEW ENGLAND MEDICAL CENTER HOSPITALS, INC.; BOSTON MEDICAL CENTER CORPORATION
Reel/Frame 016980/0043 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Nov 30, 2004
From: FOSS, FRANCINE M.; COSENZA, LARRY
To: NEW ENGLAND MEDICAL CENTER HOSPITALS, INC.
Reel/Frame 015414/0336 →