IP Library Granted Patent US 7,557,100
Granted Patent B2
US 7,557,100 · App. 11/641,215 · Granted Jul 7, 2009

Antibacterial agents

Assignee: Pfizer Inc.
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Quick Facts
Patent No.
US 7,557,100
App. No.
11/641,215
Granted
Jul 7, 2009
Kind
B2
Abstract

Described herein are antibacterial compounds, methods for making the compounds, pharmaceutical compositions containing the compounds and methods of treating bacterial infections utilizing the compounds and pharmaceutical composition.

Claims (61)

1. A compound of formula I:

or a salt, solvate, or a hydrate thereof,

wherein:

R 1 is pyrazine,

 indicates a point of attachment;

R 7 is H, halo, C 1-6 alkyl, C 3 -C 8 cycloalkyl, heterocyclyl, ether, —CN, —NR 8 R 9 , —OR 10 , —(CH 2 ) m OPO 3 (R p ) 2 , —(CH 2 ) m OC(═O)(CH 2 ) m CH 3 , —(CH 2 ) m OC(═O)(CH 2 ) m CO 2 R 6 , —(CH 2 ) m OC(═O)(CH 2 ) m NR 8 R 9 , —(CH 2 ) m OC(═O)E, —(CH 2 ) m CO 2 (CH 2 ) m CH 3 , —(CH 2 ) m CO 2 (CH 2 ) m CO 2 R 6 , —(CH 2 ) m CO 2 (CH 2 ) m NR 8 R 9 , —(CH 2 ) m CO 2 E, —(CH 2 ) m C(═O)NR 6 (CH 2 ) m CO 2 R 6 , —(CH 2 ) m C(═O)NR 8 R 9 , —(CH 2 ) m NR 8 R 9 , —(CH 2 ) m PO 3 (R 11 ) 2 , —(CH 2 ) m OR 10 , which is optionally substituted with —OR 11 , —(CH 2 ) m C(═O)OR 11 , —(CH 2 ) m NR 11 SO n R 12 , —(CH 2 ) m SO n R 12 , —(CH 2 ) m SO n NR 8 R 9 , aryl, or heteroaryl;

each n is independently is 0, 1 or 2;

R 10 is H, C 1-6 alkyl, —PO 3 H 2 , C(═O)R 13 , C(═O)OR 13 or C(═O)NR 8 R 9 and

R 11 , R 12 and R 13 are independently H, C 1-6 alkyl, aminoalkyl, benzyl, phenyl, an amino acid residue or a peptide residue;

R 2 and R 3 are independently H or C 1-6 alkyl;

R 4 and R 5 are independently H, C 1-6 alkyl which is optionally substituted with halo, ether, —(CH 2 ) m aryl, benzyl, —O(CH 2 ) m aryl, —Obenzyl, —(CH 2 ) m NR 8 R 9 , —(CH 2 ) m OR 6 , —(CH 2 ) m OPO 3 (R p ) 2 , —(CH 2 ) m OC(═O)(CH 2 ) m CH 3 , —(CH 2 ) m OC(═O)(CH 2 ) m CO 2 R 6 , —(CH 2 ) m OC(═O)(CH 2 ) m NR 8 R 9 , —(CH 2 ) m OC(═O)E, or R 4 and R 5 together with the atoms to which they are attached form a heterocyclic ring;

each m is independently 0, 1, 2 or 3;

E is an ether;

each R p is independently H, C 1-6 alkyl, benzyl, phenyl, or (R p ) 2 together with the atoms to which they are attached form a heterocyclic ring;

each R 6 is independently H, C 1-6 alkyl, C 1-6 acyl or benzyl;

R 8 and R 9 are independently H, C 1-6 alkyl or R 8 and R 9 together with the atom to which they are attached form a heterocyclic ring which is optionally substituted with C 1-6 alkyl; and

X and Y are independently H, halo, C 1-6 alkyl, —OR 6 , —CN, a ether which is optionally substituted with halo, a heterocyclyl, or a amine.

2. The compound of claim 1 or a salt, solvate, or a hydrate thereof, wherein X is H or F, Y is H or F or both X and Y are H or F.

3. The compound of claim 2 or a salt, solvate, or a hydrate thereof, wherein R 2 and R 3 are methyl.

4. The compound of claim 3 or a salt, solvate, or a hydrate thereof, wherein R 1 is

5. The compound of claim 4 or a salt, solvate, or a hydrate thereof, wherein R 7 is H or methyl.

6. The compound of claim 5 having formula Ib:

or a salt, solvate, or a hydrate thereof.

7. The compound of claim 1 or a salt, solvate, or a hydrate thereof, wherein each E or ether independently has the formula —[(CV 2 ) p O(CV 2 ) p ] q CH 3 wherein each p is independently 0, 1, 2, 3, 4, 5 or 6, each q is independently 1, 2, 3, 4, 5 or 6, each V is independently H or another —[(CV 2) p O(CV 2 ) p ] q CH 3 .

8. The compound of claim 7 or a salt, solvate, or a hydrate thereof, wherein each E or ether independently has the formula —[(CH 2) p O(CH 2 ) p ] q CH 3 where each p is independently 0, 1, 2, 3 or 4 and each q is independently 1, 2, 3 or 4.

9. The compound of claim 1 wherein said compound is selected from the group consisting of:

rel-(2S,4R,4aR)-9,10-difluoro-2,4-dimethyl-8-pyrazin-2-yl-1,2,4,4a-tetrahydro-2′H, 6H spiro[1,4-oxazino[4,3-a]quinoline-5,5′-pyrimidine]-2′,4′,6′(1′H,3′H)-trione;

(2R,4S,4aS)-9,10-difluoro-2,4-dimethyl-8-pyrazin-2-yl-1,2,4,4a-tetrahydro-2′H,6-spiro[1,4-oxazino[4,3-a]quinoline-5,5′-pyrimidine]-2′,4′,6′(1′H,3′H)-trione;

(2S,4R,4aR)-9,10-difluoro-2,4-dimethyl-8-pyrazin-2-yl-1,2,4,4a-tetrahydro-2′H,6H-spiro[1,4-oxazino[4,3-a]quinoline-5,5′-pyrimidine]-2′,4′,6′(1′H,3′H)-trione;

(2R,4S,4aS)-9,10-difluoro-2,4-dimethyl-1′,3′-bis(morpholin-4-ylmethyl)-8-pyrazin-2-yl-1,2,4,4a-tetrahydro-2′H,6H-spiro[1,4-oxazino[4,3-a]quinoline-5,5′-pyrimidine]-2′,4′,6′(1′H,3′H)-trione;

(2R,4S,4aS)-9,10-difluoro-2,4-dimethyl-1′,3′-bis[(4-methylpiperazin-1-yl)methyl]-8-pyrazin-2-yl-1,2,4,4a-tetrahydro-2′H,6H-spiro[1,4-oxazino[4,3-a]quinoline-5,5′-pyrimidine]-2′,4′,6′(1′H,3′H)-trione;

(2R,4S,4aS)-9,10-difluoro-2,4-dimethyl-8-(4-oxidopyrazinpyrazin-2-yl)-1,2,4,4a-tetrahydro-2′H,6H-spiro[1,4-oxazino[4,3-a]quinoline-5,5′-pyrimidine]-2′,4′,6′(1′H,3′H)-trione;

rel-(2S,4R,4aR)-9,10-difluoro-2,4-dimethyl-2′,4′,6′-trioxo-8-pyrazin-2-yl-1,2,4,4a-tetrahydro-2′H,6H-spiro[1,4-oxazino[4,3-a]quinoline-5,5′-pyrimidine]-1′,3′(4′H,6′H)-diyl]bis(methylene)diacetate;

(2S,4R,4aR)-9,10-difluoro-2,4-dimethyl-2′,4′,6′-trioxo-8-pyrazin-2-yl-1,2,4,4a-tetrahydro-2′H,6H-spiro[1,4-oxazino[4,3-a]quinoline-5,5′-pyrimidine]-1′,3′(4′H,6′H)-diyl]bis(methylene)diacetate;

rel-(2S,4R,4aR)-9,10-difluoro-1′,3′-bis(hydroxymethyl)-2,4-dimethyl-8-pyrazin-2-yl-1,2,4,4a-tetrahydro-2′H,6H-spiro[1,4-oxazino[4,3-a]quinoline-5,5′-pyrimidine]-2′,4′,6′(1′H,3′H)-trione;

(2S,4R,4aR)-9,10-difluoro-1′,3′-bis(hydroxymethyl)-2,4-dimethyl-8-pyrazin-2-yl-1,2,4,4a-tetrahydro-2′H,6H-spiro[1,4-oxazino[4,3-a]quinoline-5,5′-pyrimidine]-2′,4′,6′(1′H,3′H)-trione;

rel-(2S,4R,4aR)-1′,3′-bis(chloromethyl)-9,10-difluoro-2,4-dimethyl-8-pyrazin-2-yl-1,2,4,4a-tetrahydro-2′H,6H-spiro[1,4-oxazino[4,3-a]quinoline-5,5′-pyrimidine]-2′,4′,6′(1′H,3′H)-trione;

rel-tetrabenzyl [(2S,4R,4aR)-9,10-difluoro-2,4-dimethyl-2′,4′,6′-trioxo-8-pyrazin-2-yl-1,2,4,4a-tetrahydro-2′H,6H-spiro[1,4-oxazino[4,3-a]quinoline-5,5′-pyrimidine]-1′,3′(4′H,6′H)-diyl]bis(methylene)bis(phosphate);

(2S,4R,4aR)-1′,3′-bis(bromomethyl)-9,10-difluoro-2,4-dimethyl-8-pyrazin-2-yl-1,2,4,4a-tetrahydro-2′H,6H-spiro[1,4-oxazino[4,3-a]quinoline-5,5′-pyrimidine]-2′,4′,6′(1′H,3′H)-trione;

tetra-tert-butyl [(2S,4R,4aR)-9,10-difluoro-2,4-dimethyl-2′,4′,6′-trioxo-8-pyrazin-2-yl-1,2,4,4a-tetrahydro-2′H,6H-spiro[1,4-oxazino[4,3-a]quinoline-5,5′-pyrimidine]-1′,3′(4′H,6′H)-diyl]bis(methylene)bis(phosphate);

rel-(2S,4R,4aR)-10-fluoro-2,4-dimethyl-8-pyrazin-2-yl-1,2,4,4a-tetrahydro-2′H,6H-spiro[1,4-oxazino[4,3-a]quinoline-5,5′-pyrimidine]-2′,4′,6′(1′H,3′H)-trione;

rel-(2S,4R,4aR)-10-fluoro-2,4-dimethyl-9-morpholin-4-yl-8-pyrazin-2-yl-1,2,4,4a-tetrahydro-2′H,6H-spiro[1,4-oxazino[4,3-a]quinoline-5,5′-pyrimidine]-2′,4′,6′(1′H,3′H)-trione;

rel-(2S,4R,4aR)-10-fluoro-9-(2-methoxyethoxy)-2,4-dimethyl-8-pyrazin-2-yl-1,2,4,4a-tetrahydro-2′H,6H-spiro[1,4-oxazino[4,3-a]quinoline-5,5′-pyrimidine]-2′,4′,6′(1′H,3′H)-trione;

rel-(2S,4R,4aR)-10-fluoro-9-(2-fluoroethoxy)-2,4-dimethyl-8-pyrazin-2-yl-1,2,4,4a-tetrahydro-2′H,6H-spiro[1,4-oxazino[4,3-a]quinoline-5,5′-pyrimidine]-2′,4′,6′(1′H,3′H)-trione;

rel-(2S,4R,4aR)-9-fluoro-2,4-dimethyl-8-pyrazin-2-yl-1,2,4,4a-tetrahydro-2′H,6H-spiro[1,4-oxazino[4,3-a]quinoline-5,5′-pyrimidine]-2′,4′,6′(1′H,3′H)-trione;

rel-(2S,4R,4aR)-2,4-dimethyl-8-pyrazin-2-yl-1,2,4,4a-tetrahydro-2′H,6H-spiro[1,4-oxazino[4,3-a]quinoline-5,5′-pyrimidine]-2′,4′,6′(1′H,3′H)-trione;

rel-(2S,4R,4aR)-8-(3-methoxypyrazin-2-yl)-2,4-dimethyl-1,2,4,4a-tetrahydro-2′H,6H-spiro[1,4-oxazino[4,3-a]quinoline-5,5′-pyrimidine]-2′,4′,6′(1′H,3′H)-trione;

(2R,4S,4aS)-8-(5-aminopyrazin-2-yl)-9,10-difluoro-2,4-dimethyl-1,2,4,4a-tetrahydro-2′H,6H-spiro[1,4-oxazino[4,3-a]quinoline-5,5′-pyrimidine]-2′,4′,6′(1′H,3′H)-trione;

(2R,4S,4aS)-9,10-difluoro-2,4-dimethyl-8-(5-methylpyrazin-2-yl)-1,2,4,4a-tetrahydro-2′H,6H-spiro[1,4-oxazino[4,3-a]quinoline-5,5′-pyrimidine]-2′,4′,6′(1′H,3′H)-trione;

(2R,4S,4aS)-8-(5-bromopyrazin-2-yl)-9,10-difluoro-2,4-dimethyl-1,2,4,4a-tetrahydro-2′H,6H-spiro[1,4-oxazino[4,3-a]quinoline-5,5′-pyrimidine]-2′,4′,6′(1′H,3′H)-trione;

(2R,4S,4aS)-9,10-difluoro-8-(5-methoxypyrazin-2-yl)-2,4-dimethyl-1,2,4,4a-tetrahydro-2′H,6H-spiro[1,4-oxazino[4,3-a]quinoline-5,5′-pyrimidine]-2′,4′,6′(1′H,3′H)-trione; and

(2R,4S,4aS)-8-(5-ethoxypyrazin-2-yl)-9,10-difluoro-2,4-dimethyl-1,2,4,4a-tetrahydro-2′H,6H-spiro[1,4-oxazino[4,3-a]quinoline-5,5′-pyrimidine]-2′,4′,6′(1′H,3′H)-trione;

or an enantiomer or diastereomer thereof or a salt, solvate, or hydrate thereof.

10. The compound of claim 1 wherein said compound is (2R,4S,4aS)-9,10-difluoro-2, 4-dimethyl-8-(5-methylpyrazin-2-yl)-1,2,4,4a-tetrahydro-2′H,6H-spiro[1,4-oxazino [4,3-a]quinoline-5,5′-pyrimidine]-2′,4′,6′(1′H,3′H)-trione, or an enantiomer or diastereomer thereof or a salt, solvate, or hydrate thereof.

11. The compound of claim 1 wherein said compound is (2R,4S,4aS)-9,10-difluoro-2,4-dimethyl-8-(5-methylpyrazin-2-yl)-1,2,4,4a-tetrahydro-2′H, 6H-spiro[1,4-oxazino[4,3-a]quinoline-5,5′-pyrimidine]-2′,4′,6′(1′H,3′H)-trione, or a salt, solvate, or a hydrate thereof.

12. A pharmaceutical composition comprising a compound of claim 1 and a pharmaceutically acceptable carrier, diluent or excipient.

13. A method of making a compound of claim 1 having formula Ia comprising:

(a) reacting a compound of formula IIIa with a compound of formula IV at a temperature sufficient to produce a compound of formula Ia:

14. The method of claim 13 wherein (a) occurs in an aqueous or organic solvent.

15. The method of claim 14 wherein temperature of (a) is about 60 to about 180° C.

16. The method of claim 15 wherein (a) is performed for about 30 minutes to about 24 hours.

Assignments (2)
CHANGE OF NAME Recorded Mar 28, 2013
From: PAH WLC LLC
To: ZOETIS WLC LLC
Reel/Frame 030120/0813 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Feb 28, 2013
From: WARNER-LAMBERT COMPANY LLC
To: PAH WLC LLC
Reel/Frame 029896/0428 →
Continuity (2)
Provisional Application 6075326200 · Dec 22, 2005
Related Publication 20070197518A1 · Aug 23, 2007