IP Library Granted Patent US 7,968,539
Granted Patent B2
US 7,968,539 · App. 11/884,547 · Granted Jun 28, 2011

Quinoline derivatives and uses thereof

Assignee: State of Oregon acting by and through the State Board of Higher Education on behalf of Portland State University
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Quick Facts
Patent No.
US 7,968,539
App. No.
11/884,547
Granted
Jun 28, 2011
Kind
B2
Abstract

This disclosure provides a new class of compounds referred to as “reversed chloroquines” (RCQs), which are highly effective against CQ R and CQ S malaria parasites. RCQs are hybrid molecules, which include an antimalarial quinoline analog (such as chloroquine) moiety and a CQ R reversal moiety. Exemplary RCQ chemical structures are provided. Also provided are pharmaceutical compositions including the disclosed RCQ compounds, and methods of using such compounds and compositions for the treatment of malaria and inhibition of CQ R or CQ S Plasmodium sp. (such as P. falciparum ).

Claims (107)

1. An antimalarial compound having the formula:

wherein X 1 and X 2 are independently alkoxy, optionally substituted amino, halo, haloalkyl or hydroxy;

n is from 0 to 2;

m is from 0 to 4;

R 1 is H, alkyl, heteroalkyl, alkylamino, sulfonyl, haloalkyl, or carbonyl;

Y 1 represents N, CH, CH 2 CH or C(O)CH;

R 3 and R 4 are independently cycloalkyl, heterocyclyl, aryl, or heteroaryl;

L 1 is an ethyl or propyl chain; and

ring 1 is a five-, six-, or seven-membered heterocyclic ring.

2. An antimalarial compound having the formula

wherein R 3 and R 4 are independently cycloalkyl, heterocyclyl, aryl, or heteroaryl; and

L 1 is alkyl or heteroalkyl.

3. The compound of claim 2 , having the formula

4. An antimalarial compound having the formula

wherein R 3 and R 4 are independently cycloalkyl, heterocyclyl, aryl, or heteroaryl; and

L 1 is alkyl or heteroalkyl.

5. An antimalarial compound having the formula:

Q-L-G

wherein Q represents

X 1 and X 2 are independently alkoxy, optionally substituted amino, halo, haloalkyl or hydroxy;

n is from 0 to 2;

m is from 0 to 4;

R 1 is H, alkyl, heteroalkyl, alkylamino, sulfonyl, haloalkyl, or carbonyl;

L is L 1 or a hydrocarbon chain containing from 1 to 12 carbon atoms, optionally substituted, branched or both and optionally interrupted by one or more heteroatoms;

wherein G is

Y 1 represents N, CH, CH 2 CH or C(O)CH;

R 3 and R 4 are independently cycloalkyl, heterocyclyl, aryl, heteroaryl;

L 1 is alkyl or heteroalkyl;

ring 1 is a five-, six-, or seven-membered heterocyclic ring; and

wherein R 3 and R 4 together with Y 1 form a tricyclic ring system.

6. An antimalarial compound having the formula:

wherein G is

(X 1 ) m and (X 2 ) n are independently H, halo, haloalkyl, amino, hydroxyl, alkoxy, alkylamino, or arylamino;

m is 0 to 4;

n is 0 to 2;

R 1 is H, alkyl, heteroalkyl, alkylamino, haloalkyl, or alkylsulfonamide;

L 1 alkyl or heteroalkyl;

Y′ 1 is carbon;

R 3 and R 4 are independently aryl, or heteroaryl, or together with Y′ 1 form a tricyclic ring system; and

Ring 1 is a five- to six-membered heterocyclic ring.

7. The compound of claim 6 , wherein (X 1 ) m are independently H, chloro, or trifluoromethyl; and (X 2 ) n are H.

8. The compound of claim 7 , wherein m is 1 and (X 1 ) 1 is chloro at position C 7 .

9. The compound of claim 6 , wherein R 1 is H, alkyl having from 1 to 4 carbon atoms, or heteroalkyl having from 1 to 4 carbon atoms.

10. The compound of claim 9 , wherein R 1 is H, methyl, trifluoromethyl, —CH 2 CH 2 CF 3 , —CH 2 CF 3 , —CH 2 CH 2 NH 2 , —CH 2 NH 2 , —CH 2 CH 2 C(O)NH 2 , or —CH 2 C(O)NH 2 .

11. The compound of claim 5 , wherein the tricyclic ring system comprises a central ring and two peripheral rings, having a formula selected from:

wherein Y 2 is N, NR 14 , O, CH, CH 2 , or S; R 13 is H, alkyl, heteroalkyl, ═O, amino, amine, amide, sulfonamide, halo, cyano, hydroxy, mercapto, haloalkyl, alkoxy, alkylthio, thioalkoxy, arylalkyl, heteroaryl, alkylamino, dialkylamino, or alkylsulfano; (X 4 ) q and (X 5 ) t are independently H, alkyl, halo, haloalkyl, alkoxy, amino, hydroxyl, alkylamino, cyano, or mercapto; q and t are independently 0 to 4 as valence requirements permit; R 14 is H, lower alkyl, or acyl; and each of peripheral rings can independently include at least one heteroatom at any position that valence requirements permit.

12. The compound of claim 11 , wherein q and t are independently 0 to 2; (X 4 ) q and (X 5 ) t are independently H, methyl, fluoro, chloro, trifluoromethyl, methoxy, or cyano; Y 2 is N or S; and R 13 is H or ═O.

13. The compound of claim 11 , wherein Y 1 is nitrogen; Y 2 is CH, CH 2 or S; R 13 is H or ═O; (X 4 ) q and (X 5 ) t are independently H, fluoro, chloro, trifluoromethyl, cyano, or alkoxy; and q and t are independently 0 to 2.

14. An antimalarial compound having the formula:

wherein m is 1; (X 1 ) m is chloro at position C 7 ; (X 2 ) n are each H; R 1 and is H, alkyl, or heteroalkyl; L 1 is alkyl or heteroalkyl; ring 1 is a five-, six-, or seven-membered heterocyclic ring; Y′ 1 is carbon; and R 3 and R 4 are independently aryl, or heteroaryl, or together with Y′ 1 form a tricyclic ring system.

15. The compound of claim 14 , wherein R 3 and R 4 independently have the formula:

where (X 3 ) s are independently H, halo, haloalkyl, amino, hydroxyl, alkylamino, cyano, alkoxy, sulfonamide, mercapto, or keto; s is 0 to 4; Y 2 is CH, S or N; and L 3 is alkyl, heteroalkyl, —N—, —O—, or —S—.

16. The compound of claim 15 , wherein s is 1 to 2; (X 3 ), are independently H, fluoro, chloro, trifluoromethyl, methoxy, mercapto, or keto.

17. The compound of claim 15 , wherein Y 2 is nitrogen.

18. The compound of claim 15 , wherein L 3 is methyl, ethyl, methoxy, ethoxy, methylamino, ethylamino, —N—, or —O—.

19. The compound of claim 15 , wherein s is 1 to 2; (X 3 ) s are independently H, fluoro, chloro, trifluoromethyl, methoxy, mercapto, or keto; Y 2 is nitrogen; and L 3 is methyl, ethyl, methoxy, ethoxy, methylamino, ethylamino, —N—, or —O—.

20. The compound of claim 6 , wherein Y′ 1 , R 3 , and R 4 form a tricyclic ring system having a formula selected from:

wherein Y 2 is NR 14 , O, S, CH, or CH 2 ; R 13 is H, alkyl, heteroalkyl, ═O, amino, amine, amide, sulfonamide, halo, cyano, hydroxy, mercapto, haloalkyl, alkoxy, alkylthio, thioalkoxy, arylalkyl, heteroaryl, alkylamino, dialkylamino, or alkylsulfano; (X 4 ) q and (X 5 ) t are independently H, alkyl, halo, haloalkyl, alkoxy, amino, hydroxyl, alkylamino, cyano, or mercapto; q and t are independently 0 to 4 as valence requirements permit; R 14 is H, lower alkyl or acyl and each peripheral ring can independently include at least one heteroatom at any position that valence requirements permit.

21. The compound of claim 20 , wherein Y 2 is CH, CH 2 , or NR 14 ; R 13 is H or ═O; (X 4 ) q and (X 5 ) t are independently H, fluoro, chloro, trifluoromethyl, cyano, or alkoxy; and q and t are independently 0 to 2.

22. The compound of claim 21 , wherein the compound is selected from

23. The compound of claim 19 , wherein R 1 is H.

24. An antimalarial compound having the formula:

Q-L-G

wherein Q represents

wherein X 1 is halo, m is from 0 to 4, n=0, R 1 is H, L is a hydrocarbon chain containing from 1 to 12 carbon atoms, and G is

wherein Y 1 is CH, R 3 and R 4 independently are heteroaryl, and Ring 1 is a six-membered heterocyclic ring.

25. The compound of claim 5 , having a formula selected from

26. The compound of claim 6 , having a formula selected from

27. The compound of claim 2 , wherein L 1 is from 1 to 12 atoms in length, and each position of L 1 is independently methylene, difluoromethylene, dichloromethylene, di(methylamino), —NH—, or —O—.

28. The compound of claim 4 , wherein L 1 is from 1 to 12 atoms in length, and each position of L 1 is independently methylene, difluoromethylene, dichloromethylene, di(methylamino), —NH—, or —O—.

29. The compound of claim 5 , wherein L 1 is from 1 to 12 atoms in length, and each position of L 1 is independently methylene, difluoromethylene, dichloromethylene, di(methylamino), —NH—, or —O—.

30. The compound of claim 6 , wherein L 1 is from 1 to 12 atoms in length, and each position of L 1 is independently methylene, difluoromethylene, dichloromethylene, di(methylamino), —NH—, or —O—.

31. The compound of claim 14 , wherein L 1 is from 1 to 12 atoms in length, and each position of L 1 is independently methylene, difluoromethylene, dichloromethylene, di(methylamino), —NH—, or —O—.

32. The compound of claim 1 , wherein m is 1; (X 1 ) m is chloro at position C 7 ; n=0; and R 1 is H, methyl, trifluoromethyl, —CH 2 CH 2 CF 3 , —CH 2 CF 3 , —CH 2 CH 2 NH 2 , —CH 2 NH 2 , —CH 2 CH 2 C(O)NH 2 , or —CH 2 C(O)NH 2 .

33. The compound of claim 2 , wherein the chloro is at position C 7 , L 1 is from 1 to 12 atoms in length, and each position of L 1 is independently methylene, difluoromethylene, dichloromethylene), di(methylamino), —NH—, or —O—.

34. The compound of claim 5 , wherein m is 1; (X 1 ) m is chloro at position C 7 ; n=0; R 1 is H, methyl, trifluoromethyl, —CH 2 CH 2 CF 3 , —CH 2 CF 3 , —CH 2 CH 2 NH 2 , —CH 2 NH 2 , —CH 2 CH 2 C(O)NH 2 , or —CH 2 C(O)NH 2 ; and L 1 is from 1 to 12 atoms in length, and each position of L 1 is methylene, difluoromethylene, dichloromethylene), di(methylamino), —NH—, or —O—.

35. The compound of claim 6 , wherein m is 1; (X 1 ) m is chloro at position C 7 ; n=0; R 1 is H, methyl, trifluoromethyl, —CH 2 CH 2 CF 3 , —CH 2 CF 3 , —CH 2 CH 2 NH 2 , —CH 2 NH 2 , —CH 2 CH 2 C(O)NH 2 , or —CH 2 C(O)NH 2 ; and L 1 is from 1 to 12 atoms in length, and each position of L 1 is methylene, difluoromethylene, dichloromethylene), di(methylamino), —NH—, or —O—.

36. The compound of claim 14 , wherein R 1 is H, methyl, trifluoromethyl, —CH 2 CH 2 CF 3 , —CH 2 CF 3 , —CH 2 CH 2 NH 2 , —CH 2 NH 2 , —CH 2 CH 2 C(O)NH 2 , or —CH 2 C(O)NH 2 ; and L 1 is from 1 to 12 atoms in length, and each position of L 1 is methylene, difluoromethylene, dichloromethylene), di(methylamino), —NH—, or —O—.

37. The compound of claim 24 , wherein m is 1; (X 1 ) m is chloro at position C 7 ; and n=0.

38. The compound of claim 1 , wherein R 3 and R 4 are different.

39. The compound of claim 2 , wherein R 3 and R 4 are different.

40. The compound of claim 4 , wherein R 3 and R 4 are different.

41. The compound of claim 5 , wherein R 3 and R 4 are different.

42. The compound of claim 6 , wherein R 3 and R 4 are different.

43. The compound of claim 14 , wherein R 3 and R 4 are different.

44. The compound of claim 24 , wherein R 3 and R 4 are different.

45. A pharmaceutical composition, the composition comprising a therapeutically effective amount of the compound of claim 1 ; and a pharmaceutically acceptable carrier.

46. The pharmaceutical composition of claim 45 further comprising at least one additional antimalarial therapeutic agent.

47. The pharmaceutical composition of claim 46 , wherein the at least one additional antimalarial therapeutic agent is artesunate, mefloquine, sulfadoxine, or pyrimethamine, or combinations thereof.

48. A pharmaceutical composition, the composition comprising a therapeutically effective amount of the compound of claim 2 ; and a pharmaceutically acceptable carrier.

49. The pharmaceutical composition of claim 48 further comprising at least one additional antimalarial therapeutic agent.

50. The pharmaceutical composition of claim 49 , wherein the at least one additional antimalarial therapeutic agent is artesunate, mefloquine, sulfadoxine, or pyrimethamine, or combinations thereof.

51. A pharmaceutical composition, the composition comprising a therapeutically effective amount of the compound of claim 4 ; and a pharmaceutically acceptable carrier.

52. The pharmaceutical composition of claim 51 further comprising at least one additional antimalarial therapeutic agent.

53. The pharmaceutical composition of claim 52 , wherein the at least one additional antimalarial therapeutic agent is artesunate, mefloquine, sulfadoxine, or pyrimethamine, or combinations thereof.

54. A pharmaceutical composition, the composition comprising a therapeutically effective amount of the compound of claim 5 ; and a pharmaceutically acceptable carrier.

55. The pharmaceutical composition of claim 54 further comprising at least one additional antimalarial therapeutic agent.

56. The pharmaceutical composition of claim 55 , wherein the at least one additional antimalarial therapeutic agent is artesunate, mefloquine, sulfadoxine, or pyrimethamine, or combinations thereof.

57. A pharmaceutical composition, the composition comprising a therapeutically effective amount of the compound of claim 6 ; and a pharmaceutically acceptable carrier.

58. The pharmaceutical composition of claim 57 further comprising at least one additional antimalarial therapeutic agent.

59. The pharmaceutical composition of claim 58 , wherein the at least one additional antimalarial therapeutic agent is artesunate, mefloquine, sulfadoxine, or pyrimethamine, or combinations thereof.

60. A pharmaceutical composition, the composition comprising a therapeutically effective amount of the compound of claim 14 ; and a pharmaceutically acceptable carrier.

61. The pharmaceutical composition of claim 60 further comprising at least one additional antimalarial therapeutic agent.

62. The pharmaceutical composition of claim 61 , wherein the at least one additional antimalarial therapeutic agent is artesunate, mefloquine, sulfadoxine, or pyrimethamine, or combinations thereof.

63. A pharmaceutical composition, the composition comprising a therapeutically effective amount of the compound of claim 24 ; and a pharmaceutically acceptable carrier.

64. The pharmaceutical composition of claim 63 further comprising at least one additional antimalarial therapeutic agent.

65. The pharmaceutical composition of claim 64 , wherein the at least one additional antimalarial therapeutic agent is artesunate, mefloquine, sulfadoxine, or pyrimethamine, or combinations thereof.

Assignments (2)
CONFIRMATORY LICENSE Recorded Jun 8, 2016
From: PORTLAND STATE UNIVERSITY
To: NATIONAL INSTITUTES OF HEALTH (NIH), U.S. DEPT. OF HEALTH AND HUMAN SERVICES (DHHS), U.S. GOVERNMENT
Reel/Frame 038906/0106 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Aug 16, 2007
From: PEYTON, DAVID H.; BURGESS, STEVEN
To: STATE OF OREGON ACTING BY AND THROUGH THE STATE BOARD OF HIGHER EDUCATION ON BEHALF OF PORTLAND STATE UNIVERSITY
Reel/Frame 019783/0062 →
Continuity (2)
Provisional Application 60654207 · Feb 17, 2005
Related Publication 20080188462A1 · Aug 7, 2008