IP Library Granted Patent US 8,546,071
Granted Patent B2
US 8,546,071 · App. 12/180,857 · Granted Oct 1, 2013

High-throughput in vitro translation (cell-lysate based) assay for detecting quorum sensing signals

Inventors: Alan W. Decho (Columbia, SC); Tomohiro Kawaguchi (Columbia, SC); Yung-pin Chen (Columbia, SC)
Assignee: University of South Carolina
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Quick Facts
Patent No.
US 8,546,071
App. No.
12/180,857
Granted
Oct 1, 2013
Kind
B2
Abstract

A cell-lysate extract based assay reagent for detecting quorum sensing signals is generally provided, along with methods of making and using the same. The assay reagent generally includes a cell-lysate extract formed from a biosensor bacterium (e.g., Agrobacterium tumefaciens NTL4 (pCF218)(pCF372)) and a detecting substrate (e.g., an absorbance-based or luminescence-based substrate). The cell-lysate extract can be prepared by (1) disrupting the cell membranes of the biosensor bacterium to release the cellular components into a solution, (2) centrifuging the resulting solution, and (3) removing the resulting supernatant solution.

Claims (30)

1. A method of detecting a quorum sensing signal in a bacteria sample, the method comprising:

adding a detecting substrate and the cell-lysate extract solution to a well of a microtiter plate to form an assay reagent configured to report the detection of the quorum sensing signal, wherein the detecting substrate is an absorbance-based substrate or a luminescence-based substrate, and wherein the cell-lysate extract solution is formed from Agrobacterium tumefaciens NTL4 (pCF218)(pCF372);

adding the bacteria sample to the well;

incubating the bacteria sample within the well in the presence of the cell-lysate extract solution;

measuring absorbance or luminescence of the assay reagent in the presence of the bacteria sample within the well; and

determining the presence or absence of quorum sensing signals in the bacteria sample, wherein the quorum sensing signal comprises an acyl-homoserine lactone.

2. The method as in claim 1 , wherein the assay reagent is an aqueous-based solution comprising the detectable substrate and the cell-lysate extract solution.

3. The method as in claim 1 , wherein the detecting substrate comprises an absorbance-based substrate.

4. The method as in claim 3 , wherein the absorbance-based substrate comprises 5-bromo-4-chloro-3-indolyl-β-D-galactopyransoside.

5. The method as in claim 3 , wherein absorbance is measured by:

applying a light having a specific wavelength to the assay reagent in the presence of the bacteria sample, and

measuring any absorbance of the sample at the specific wavelength.

6. The method as in claim 1 , wherein the detecting substrate comprises a luminescence-based substrate.

7. The method as in claim 6 , wherein the luminescence-based substrate comprises 6-O-β-galactopyranosyl luciferin.

8. The method as in claim 6 , wherein luminescence is measured by reading the luminescence of the sample using a luminometer.

9. The method as in claim 1 , wherein forming the cell-lysate extract solution from the biosensor bacterium comprises:

centrifuging a cell culture to create cell pellets;

collecting the cell pellets comprising cells, wherein each cell comprises cellular contents surrounded by a cell membrane; and

disrupting the cell membranes of the cells to release the cellular contents into an aqueous solution.

10. The method as in claim 9 , wherein disrupting the cell membranes of the cells to release the cellular contents into the solution comprises:

applying sound energy to the cells to disrupt the cell membranes and release the cellular contents.

11. The method as in claim 9 , further comprising:

centrifuging the aqueous solution to form the cell-lysate extract solution as a supernatant solution containing the cell contents separated from the cell wall membranes.

12. The method as in claim 1 , wherein the bacteria sample is incubated with the well prior to adding the detecting substrate and the cell-lysate extract solution.

13. The method as in claim 12 , further comprising:

after adding the detecting substrate and the cell-lysate extract solution to the well, incubating the detecting substrate with the cell-lysate extract solution.

14. The method as in claim 1 , wherein the detecting substrate and the cell-lysate extract solution are added after the bacteria sample is added to the well.

15. The method as in claim 2 , wherein the assay reagent is a buffered aqueous-based solution comprising a buffering agent and having a pH that is balanced from about 5 to about 9.

16. The method as in claim 15 , wherein the buffered aqueous-based solution has a pH that is balanced from about 6 to about 8.

17. The method as in claim 15 , wherein the buffered aqueous-based solution comprises KH 2 PO 4 .

Assignments (2)
CONFIRMATORY LICENSE Recorded Jul 1, 2010
From: UNIVERSITY OF SOUTH CAROLINA
To: NATIONAL SCIENCE FOUNDATION
Reel/Frame 024621/0462 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Nov 5, 2008
From: DECHO, ALAN W.; YAWAGUCHI, TOMOHIRO; CHIN, YUNG-PIN
To: UNIVERSITY OF SOUTH CAROLINA
Reel/Frame 021787/0206 →
Continuity (3)
Provisional Application 60962323 · Jul 27, 2007
Provisional Application 60964098 · Aug 9, 2007
Related Publication 20120164672A1 · Jun 28, 2012