IP Library › Patent Application 12419218
Patent Application
App. No. 12/419,218

COMPOSITE ARRAYS UTILIZING MICROSPHERES WITH A HYBRIDIZATION CHAMBER

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Quick Facts
Patent No.
US None
App. No.
12/419,218
Abstract

The invention relates to sensor compositions comprising a composite array of individual arrays, to allow for simultaneous processing of a number of samples. The invention further provides methods of making and using the composite arrays. The invention further provides a hybridization chamber for use with a composite array.

Claims (32)

1 - 50 . (canceled)

51 . A process of forming a plurality of random arrays of encoded particles on a substrate, wherein each of the arrays are formed by random placement of encoded particles, wherein differently encoded particles have a different label, comprising:

(i) placing and confining a group of differently encoded particles into one or more sites on a substrate having a plurality of sites, so as to form a first confined group of particles occupying particular sites;

(ii) recording the positions of the encoded particles within said confined group;

(iii) placing and confining an additional group of differently encoded particles into unoccupied sites on the substrate so as to form an additional group of confined particles occupying particular sites;

(iv) recording the positions of particles within said additional confined group; and

repeating steps (iii) to (iv) several times so as to form a plurality of a random encoded arrays of particles.

52 . The substrate of claim 51 wherein the substrate comprises silicon or doped silicon.

53 . The substrate of claim 51 wherein differently encoded particles have different biological reagents bound thereto.

54 . The process of claim 51 wherein the arrangement of the encoded particles in the sites is random.

55 . The process of claim 51 further comprising the step of affixing the particles onto the substrate.

56 . A method of forming a composite array of randomly distributed, identifiable microspheres on a substrate having a plurality of assay locations, comprising:

(a) randomly distributing a population of microspheres, including subpopulations of microspheres carrying different chemical functionalities, to discrete sites within a first assay location;

(b) determining the location of said subpopulations of microspheres within said first assay location;

(c) randomly distributing a different population of microspheres, including subpopulations of microspheres carrying different chemical functionalities, to discrete sites within a second assay location;

(d) determining the location of said subpopulations of microspheres within said second assay location; and

(e) repeating steps (c) to (d) as many times as necessary so as to form a composite array.

57 . The substrate of claim 56 wherein the substrate comprises silicon or doped silicon.

58 . The substrate of claim 56 wherein differently encoded particles have different biological reagents bound thereto.

59 . The process of claim 56 wherein the arrangement of the encoded particles in the sites is random.

60 . The process of claim 56 further comprising the step of affixing the particles onto the substrate.

61 . A method of forming a composite array of randomly distributed, identifiable microspheres on a substrate having a plurality of assay locations, comprising:

(a) providing a library of microspheres comprising a plurality of sublibraries, wherein each sublibrary further comprises a plurality of subpopulations of uniquely identifiable microspheres;

(b) randomly distributing a first sublibrary, including subpopulations of uniquely identifiable microspheres, to discrete sites within a first assay location;

(c) determining the location of said subpopulations of microspheres within said first assay location;

(d) randomly distributing a second sublibrary of microspheres, including subpopulations of uniquely identifiable microspheres, to discrete sites within a second assay location;

(e) determining the location of said subpopulations of microspheres within said second assay location;

(f) repeating steps (d) to (e) with different sublibraries and assay locations multiple times so as to form a composite array.

62 . The substrate of claim 61 wherein the substrate comprises silicon or doped silicon.

63 . The substrate of claim 61 wherein differently encoded particles have different biological reagents bound thereto.

64 . The process of claim 61 wherein the arrangement of the encoded particles in the sites is random.

65 . The process of claim 61 further comprising the step of affixing the particles onto the substrate.

Assignments (3)
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Mar 21, 2013
From: AFFYMETRIX, INC.
To: ILLUMINA, INC.
Reel/Frame 030058/0539 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Mar 21, 2013
From: KIRK, GREGORY L.
To: ILLUMINA, INC.
Reel/Frame 030058/0585 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Aug 14, 2009
From: STUELPNAGEL, JOHN R.; CHEE, MARK S.; AUGER, STEVEN R.; WANG, GAN G.; CASAS, LAURA S.; BAKER, SHAWN CHRISTOPHER; KAIN, ROBERT C.
To: ILLUMINA, INC.
Reel/Frame 023084/0697 →