IP Library Granted Patent US 7,811,998
Granted Patent B2
US 7,811,998 · App. 12/571,899 · Granted Oct 12, 2010

Novobiocin analogues as anticancer agents

Assignees: University of Kansas; The United States of America as represented by the Department of Health and Human Services
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Quick Facts
Patent No.
US 7,811,998
App. No.
12/571,899
Granted
Oct 12, 2010
Kind
B2
Abstract

Novel analogues and derivatives of novobiocin are provided, including compounds having modifications to the amide side chain, coumarin ring, and sugar moieties. The compounds of the present invention are useful as heat shock protein 90 inhibitors, and may be used as anticancer and neuroprotective agents.

Claims (59)

1. A compound according to Formula I

wherein R 1 is hydrogen, alkyl, aryl or amido;

wherein R 2 is hydrogen; hydroxy or —R 8 —OR 9 , wherein R 8 is a covalent bond or alkyl, and R 9 is C-amido or acyl; or R 2 together with R 3 and the atoms to which they are attached form a heterocyclic ring having 4 to 8 ring members with at least one heteroatom selected from oxygen or nitrogen;

wherein R 3 is hydrogen; hydroxy or —R 10 —OR 11 , wherein R 10 is a covalent bond or alkyl, and R 11 is C-amido or acyl; or R 3 together with R 2 and the atoms to which they are attached form a heterocyclic ring having 4 to 8 ring members with at least one heteroatom selected from oxygen or nitrogen;

wherein R 4 is hydrogen or methyl;

wherein R 5 is hydrogen or alkyl;

wherein R 6 is hydrogen, alkyl, alkenyl, alkynyl, aryl, aralkyl, alkoxy, aryloxy, or aralkoxy;

wherein X 1 is —O—, —CO—, or —N—;

wherein X 2 is —O—, —N—, —NR 18 —, —CR 19 —, or —CO—;

wherein R 18 and R 19 are hydrogen, alkyl, alkenyl, or alkynyl;

wherein X 4 is —CR 20 —, wherein R 20 is hydrogen, alkyl, alkenyl, or alkynyl;

wherein X 5 is —CR 21 —, wherein R 21 is hydrogen, alkyl, alkenyl, or alkynyl;

wherein X 6 is —CR 22 —, wherein R 22 is hydrogen, alkyl, alkenyl, alkynyl, alkoxy, aryl, aralkyl, halogen, or nitro;

wherein X 8 is —CR 23 — or —N—, wherein R 23 is hydrogen, alkyl, alkenyl, or alkynyl;

wherein X 9 is ether;

and wherein at least one of X 1 , X 2 , X 4 , X 5 , X 6 , X 8 is not —CR—;

wherein n is 1; and

wherein R 2 and R 3 are not simultaneously hydroxy.

2. The coumarin compound of claim 1 wherein X 1 is —O— and X 2 is —CO—.

3. The isocoumarin compound of claim 1 wherein X 1 is —CO— and X 2 is —O—.

4. The compound of claim 2 wherein R 4 and R 5 are both methyl.

5. The compound of claim 2 wherein X 4 is —CR 20 — and R 20 is hydrogen, and wherein X 8 is —CR 23 — and R 23 is hydrogen or alkyl.

6. The compound of claim 5 wherein R 1 is amido.

7. The compound of claim 6 selected from the group consisting of:

N-(7-((3aR,4R,7R,7aR)-7-methoxy-6,6-dimethyl-2-oxo-tetrahydro-3aH-[1,3]dioxolo[4,5-c]pyran-4-yloxy)-2-oxo-2H-chromen-3-yl)acetamide (A1);

(2R,3R,4R,5R)-2-(3-acetamido-2-oxo-2H-chromen-7-yloxy)-4-hydroxy-5-methoxy-6,6-dimethyl-tetrahydro-2H-pyran-3-yl carbamate (A2);

(3R,4S,5R,6R)-6-(3-acetamido-2-oxo-2H-chromen-7-yloxy)-5-hydroxy-3-methoxy-2,2-dimethyl tetrahydro-2H-pyran-4-yl carbamate (A3); and

4-deshydroxy-8-desmethylnovobiocin.

8. The compound of claim 5 wherein R 1 is hydrogen.

9. The compound of claim 8 selected from the group consisting of:

7-((3aR,4R,7R,7aR)-7-methoxy-6,6-dimethyl-2-oxo-tetrahydro-3 aH-[1,3]dioxolo[4,5-c]pyran-4-yloxy)-2H-chromen-2-one (B1);

(3R,4S,5R,6R)-5-hydroxy-3-methoxy-2,2-dimethyl-6-(2-oxo-2H-chromen-7-yloxy)-tetrahydro-2H-pyran-4-yl carbamate (B2);

(2R,3R,4R,5R)-4-hydroxy-5-methoxy-6,6-dimethyl-2-(2-oxo-2H-chromen-7-yloxy)-tetrahydro-2H-pyran-3-yl carbamate (B3).

10. The compound of claim 2 wherein X 4 , is —CR 20 — and R 20 is alkyl and wherein R 1 is aryl.

11. The compound of claim 10 selected from the group consisting of:

7-((3aR,4R,7R,7aR)-7-methoxy-6,6-dimethyl-2-oxo-tetrahydro-3 aH-[1,3]dioxolo[4,5-c]pyran-4-yloxy)-4-methyl-3-phenyl-2H-chromen-2-one (C1);

(3R,4S,5R,6R)-5-hydroxy-3-methoxy-2,2-dimethyl-6-(4-methyl-2-oxo-3-phenyl-2H-chromen-7-yloxy)-tetrahydro-2H-pyran-4-yl carbamate (C2); and

(2R,3R,4R,5R)-4-hydroxy-5-methoxy-6,6-dimethyl-2-(4-methyl-2-oxo-3-phenyl-2H-chromen-7-yloxy)-tetrahydro-2H-pyran-3-yl carbamate (C3).

12. The compound of claim 2 wherein X 4 is —CR 20 — and R 20 is hydrogen, and wherein X 8 is —CR 23 — and R 23 is alkyl.

13. The compound of claim 12 wherein R 1 is amido.

14. The compound of claim 13 selected from the group consisting of:

4-deshydroxynovobiocin (DHN1); and

(3R,4S,5R,6R)-6-(3-acetamido-2-oxo-2H-chromen-7-yloxy)-8-methyl-5-hydroxy-3-methoxy-2,2-dimethyltetrahydro-2H-pyran-4-yl carbamate (8-methyl A3).

15. A compound according to Formula II:

wherein R 2 is hydrogen; hydroxy or —R 8 —OR 9 , wherein R 8 is a covalent bond or alkyl, and R 9 is C-amido or acyl; or R 2 together with R 3 and the atoms to which they are attached form a heterocyclic ring having 4 to 8 ring members with at least one heteroatom selected from oxygen or nitrogen; and

wherein R 3 is hydrogen; hydroxyl or —R 10 —OR 11 , wherein R 10 is a covalent bond or alkyl, and R 11 is C-amido or acyl; or R 3 together with R 2 and the atoms to which they are attached form a heterocyclic ring having 4 to 8 ring members with at least one heteroatom selected from oxygen or nitrogen.

16. The compound of claim 15 selected from the group consisting of:

8-(7-Methoxy-6,6-dimethyl-2-oxo-tetrahydro-[1,3]dioxolo[4,5-c]pyran-4-yloxy)-chromen-2-one (D1);

Carbamic acid 4-hydroxy-5-methoxy-6,6-dimethyl-2-(2-oxo-2H-chromen-8-yloxy)-tetrahydro-pyran-3-yl ester (D2);

Carbamic acid 5-hydroxy-3-methoxy-2,2-dimethyl-6-(2-oxo-2H-chromen-8-yloxy)-tetrahydro-pyran-4-yl ester (D3); and

8-(3,4-Dihydroxy-5-methoxy-6,6-dimethyl-tetrahydro-pyran-2-yloxy)-chromen-2-one (D4).

17. A compound according to Formula III:

wherein R 2 is hydrogen; hydroxy or —R 8 —OR 9 , wherein R 8 is a covalent bond or alkyl, and R 9 is C-amido or acyl; or R 2 together with R 3 and the atoms to which they are attached form a heterocyclic ring having 4 to 8 ring members with at least one heteroatom selected from oxygen or nitrogen; and

wherein R 3 is hydrogen; hydroxyl or —R 10 —OR 11 , wherein R 10 is a covalent bond or alkyl, and R 11 is C-amido or acyl; or R 3 together with R 2 and the atoms to which they are attached form a heterocyclic ring having 4 to 8 ring members with at least one heteroatom selected from oxygen or nitrogen.

18. The compound of claim 17 selected from the group consisting of:

6-(7-Methoxy-6,6-dimethyl-2-oxo-tetrahydro-[1,3]dioxolo[4,5-c]pyran-4-yloxy)-chromen-2-one [E1];

Carbamic acid 5-hydroxy-3-methoxy-2,2-dimethyl-6-(2-oxo-2H-chromen-6-yloxy)-tetrahydro-pyran-4-yl ester (E2);

Carbamic acid 4-hydroxy-5-methoxy-6,6-dimethyl-2-(2-oxo-2H-chromen-6-yloxy)-tetrahydro-pyran-3-yl ester (E3); and

6-(3,4-Dihydroxy-5-methoxy-6,6-dimethyl-tetrahydro-pyran-2-yloxy)-chromen-2-one (E4).

Assignments (2)
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Nov 5, 2009
From: BLAGG, BRIAN S.J.; YU, XIAO MING
To: UNIVERSITY OF KANSAS
Reel/Frame 023478/0715 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Nov 5, 2009
From: NECKERS, LEN
To: SECRETARY OF THE DEPARTMENT OF HEALTH AND HUMAN SERVICES
Reel/Frame 023478/0744 →
Continuity (3)
Continuation 1126614900 · Nov 3, 2005
Provisional Application 6062456600 · Nov 3, 2004
Related Publication 20100048882A1 · Feb 25, 2010